BLASTX nr result
ID: Chrysanthemum22_contig00045362
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00045362
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GBC54551.1| gag-pol fusion protein [Rhizophagus irregularis ... 91 9e-26
gb|KZN00833.1| hypothetical protein DCAR_009587 [Daucus carota s... 91 1e-25
gb|PKU73177.1| Retrovirus-related Pol polyprotein from transposo... 89 3e-25
ref|XP_019184819.1| PREDICTED: uncharacterized protein LOC109179... 80 2e-24
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays] 93 4e-24
gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis D... 78 6e-24
ref|XP_009881815.1| PREDICTED: uncharacterized protein LOC104285... 84 7e-24
gb|ABA98847.1| retrotransposon protein, putative, unclassified [... 87 7e-24
gb|AAP53706.1| retrotransposon protein, putative, unclassified [... 87 1e-23
gb|ABF67921.1| Ji1 putative pol protein [Zea mays] 93 1e-23
gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays] 93 2e-23
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo... 89 2e-23
dbj|GAU46301.1| hypothetical protein TSUD_283270, partial [Trifo... 91 2e-23
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 93 2e-23
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 89 2e-23
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo... 89 2e-23
gb|PKU75463.1| Retrovirus-related Pol polyprotein from transposo... 83 2e-23
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays] 92 3e-23
gb|AAN40035.1| putative gag-pol polyprotein [Zea mays] 92 3e-23
gb|AAL66753.1|AF464738_4 putative copia-type pol polyprotein [Ze... 92 3e-23
>dbj|GBC54551.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 181602]
Length = 429
Score = 90.9 bits (224), Expect(3) = 9e-26
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NGEL+E VYVSQP F DP+ P +VY L KAL GLK APRAWYDTLS+FLL N F +G V
Sbjct: 185 NGELEEEVYVSQPPGFEDPEFPEYVYFLLKALYGLKQAPRAWYDTLSQFLLDNHFSRGTV 244
Query: 101 DPTLF 87
D TLF
Sbjct: 245 DKTLF 249
Score = 44.7 bits (104), Expect(3) = 9e-26
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = -2
Query: 394 FDWDTLKCARIETIRIFLANAASKNMIVYQMDVKTAFL 281
FD AR+E IRIFLA AA N VYQMDVK+AFL
Sbjct: 147 FDETFAPVARLEAIRIFLAYAAHANFKVYQMDVKSAFL 184
Score = 29.3 bits (64), Expect(3) = 9e-26
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 57 VQIYVDDIIFASMDQIEC 4
VQIYVDDIIF S D+ C
Sbjct: 260 VQIYVDDIIFGSTDEKLC 277
>gb|KZN00833.1| hypothetical protein DCAR_009587 [Daucus carota subsp. sativus]
Length = 491
Score = 91.3 bits (225), Expect(3) = 1e-25
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NGEL+E VYV QP FVD P HVYRL KAL GLK APRAWY+TL++FLL +GF +G +
Sbjct: 100 NGELEEEVYVEQPPGFVDTKFPDHVYRLDKALYGLKQAPRAWYETLAQFLLDSGFNRGTI 159
Query: 101 DPTLF 87
D TLF
Sbjct: 160 DKTLF 164
Score = 42.0 bits (97), Expect(3) = 1e-25
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
AR+E IRIFLA AA K V+QMDVK+AFL
Sbjct: 70 ARLEAIRIFLAYAAHKKFKVFQMDVKSAFL 99
Score = 30.8 bits (68), Expect(3) = 1e-25
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 75 GKHLLHVQIYVDDIIFASMDQIECD 1
G LL VQ+YVDDIIF S + C+
Sbjct: 169 GNDLLLVQVYVDDIIFGSTNSKLCE 193
>gb|PKU73177.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
gb|PKU77260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
gb|PKU78447.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
gb|PKU81819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 661
Score = 89.0 bits (219), Expect(3) = 3e-25
Identities = 44/68 (64%), Positives = 47/68 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F P HVY+LKKAL GLK APRAWY+ LS FLL GF KG V
Sbjct: 268 NGVIKEDVYVEQPPGFESSQFPNHVYKLKKALYGLKQAPRAWYERLSSFLLNRGFQKGSV 327
Query: 101 DPTLFTQK 78
D TLF QK
Sbjct: 328 DTTLFLQK 335
Score = 39.7 bits (91), Expect(3) = 3e-25
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
AR+E IR+ LA A KN +YQMDVK+AFL
Sbjct: 238 ARLEAIRVLLAFACFKNFKLYQMDVKSAFL 267
Score = 34.3 bits (77), Expect(3) = 3e-25
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIECD 1
K+ + +L VQIYVDDI+F S D+ CD
Sbjct: 335 KVKEEILIVQIYVDDILFGSSDKNLCD 361
>ref|XP_019184819.1| PREDICTED: uncharacterized protein LOC109179781 [Ipomoea nil]
Length = 1071
Score = 79.7 bits (195), Expect(3) = 2e-24
Identities = 43/68 (63%), Positives = 45/68 (66%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG L E VYV QP FV + VY LKKAL GLK APRAWYDTLS FL+ GF KG V
Sbjct: 824 NGLLVEEVYVEQPPGFVVNNEHEKVYHLKKALYGLKQAPRAWYDTLSHFLINCGFMKGAV 883
Query: 101 DPTLFTQK 78
D TLF K
Sbjct: 884 DKTLFRIK 891
Score = 44.3 bits (103), Expect(3) = 2e-24
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2
Query: 394 FDWDTLKCARIETIRIFLANAASKNMIVYQMDVKTAFL 281
FD AR+E IRIF+A AA KN VYQMDVK++FL
Sbjct: 786 FDETFAPVARLEAIRIFMAFAAYKNFRVYQMDVKSSFL 823
Score = 36.2 bits (82), Expect(3) = 2e-24
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIECD 1
K H+L VQIYVDDIIF SM+ + C+
Sbjct: 891 KDNDHILLVQIYVDDIIFGSMNPVLCE 917
>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 93.2 bits (230), Expect(3) = 4e-24
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVYRL KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 1497 NGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 1556
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 1557 DPTLFTKTLENDLFV 1571
Score = 38.1 bits (87), Expect(3) = 4e-24
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -2
Query: 400 LIFDWDTLKCARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
L FD AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 1457 LDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1502
Score = 27.7 bits (60), Expect(3) = 4e-24
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 1573 QIYVDDIIFGSTNESTCE 1590
>gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 514
Score = 77.8 bits (190), Expect(3) = 6e-24
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
+GE+ VY+ QP F DP P H ++L+KA+ GLK APRAWY TLS FL +GF +G +
Sbjct: 119 HGEIDRDVYIQQPPGFEDPQFPNHSFKLQKAVYGLKQAPRAWYSTLSTFLEESGFKRGSI 178
Query: 101 DPTLF 87
D TLF
Sbjct: 179 DQTLF 183
Score = 45.8 bits (107), Expect(3) = 6e-24
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 445 CESRVHLILRDNLHTLIFDWDTLKC--ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
C ++ L+++ D+D AR+E IRIFLA AA KN V+QMDVK AFL
Sbjct: 62 CRNKARLVVKGYSQQEGIDYDETYAPVARLEAIRIFLAYAAHKNFKVFQMDVKCAFL 118
Score = 35.0 bits (79), Expect(3) = 6e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 72 KHLLHVQIYVDDIIFASMDQ 13
KHLL VQIYVDDIIF S D+
Sbjct: 189 KHLLIVQIYVDDIIFGSTDE 208
>ref|XP_009881815.1| PREDICTED: uncharacterized protein LOC104285113, partial [Charadrius
vociferus]
Length = 1477
Score = 84.0 bits (206), Expect(3) = 7e-24
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG++ E+VYV QP F DP P HV++L KAL GLK APRAWY+ L FLL+ F G V
Sbjct: 1122 NGKISELVYVEQPPGFEDPKRPNHVFKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKV 1181
Query: 101 DPTLFTQK 78
D TLFT++
Sbjct: 1182 DTTLFTKR 1189
Score = 39.7 bits (91), Expect(3) = 7e-24
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
AR+E IRI LA A + N+ +YQMDVK+AFL
Sbjct: 1092 ARLEAIRILLAYACAHNIKLYQMDVKSAFL 1121
Score = 34.7 bits (78), Expect(3) = 7e-24
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIECD 1
+IGK L QIYVDDIIF S +++ C+
Sbjct: 1189 RIGKDLFVCQIYVDDIIFGSTNELFCE 1215
>gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1417
Score = 87.0 bits (214), Expect(3) = 7e-24
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG ++E VYV QP F +PD P HV++L KAL GLK APRAWYD L FLLA GF G V
Sbjct: 1023 NGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKV 1082
Query: 101 DPTLFTQK 78
D TLF K
Sbjct: 1083 DKTLFVLK 1090
Score = 43.9 bits (102), Expect(3) = 7e-24
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -2
Query: 409 LHTLIFDWDTLKCARIETIRIFLANAASKNMIVYQMDVKTAFL 281
+ +L FD ARIE IR+ LA AASK +YQMDVK+AFL
Sbjct: 980 VESLDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFL 1022
Score = 27.3 bits (59), Expect(3) = 7e-24
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIF 28
K G + L VQIYVDDIIF
Sbjct: 1090 KHGDNQLFVQIYVDDIIF 1107
>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1419
Score = 87.0 bits (214), Expect(3) = 1e-23
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG ++E VYV QP F +PD P HV++L KAL GLK APRAWYD L FLLA GF G V
Sbjct: 1025 NGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKV 1084
Query: 101 DPTLFTQK 78
D TLF K
Sbjct: 1085 DKTLFVLK 1092
Score = 43.1 bits (100), Expect(3) = 1e-23
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -2
Query: 400 LIFDWDTLKCARIETIRIFLANAASKNMIVYQMDVKTAFL 281
L FD ARIE IR+ LA AASK +YQMDVK+AFL
Sbjct: 985 LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFL 1024
Score = 27.3 bits (59), Expect(3) = 1e-23
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIF 28
K G + L VQIYVDDIIF
Sbjct: 1092 KHGDNQLFVQIYVDDIIF 1109
>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
Length = 1063
Score = 93.2 bits (230), Expect(3) = 1e-23
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVYRL KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 668 NGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 727
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 728 DPTLFTKTLENDLFV 742
Score = 36.6 bits (83), Expect(3) = 1e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 638 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 673
Score = 27.7 bits (60), Expect(3) = 1e-23
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 744 QIYVDDIIFGSTNESTCE 761
>gb|AAL76004.1|AF466646_12 putative gag-pol polyprotein [Zea mays]
Length = 1694
Score = 92.8 bits (229), Expect(3) = 2e-23
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVYRL KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 1468 NGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 1527
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 1528 DPTLFTKTLDNDLFV 1542
Score = 36.6 bits (83), Expect(3) = 2e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 1438 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1473
Score = 27.7 bits (60), Expect(3) = 2e-23
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 1544 QIYVDDIIFGSTNESTCE 1561
>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1564
Score = 89.4 bits (220), Expect(3) = 2e-23
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG ++E VYV QP FVD +P HVY+LKKAL GLK APR+WYD LSKFL+ N + +G V
Sbjct: 1170 NGFIQEEVYVEQPPGFVDYKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKV 1229
Query: 101 DPTLFTQK*AN 69
D TLF +K N
Sbjct: 1230 DNTLFVKKFKN 1240
Score = 39.7 bits (91), Expect(3) = 2e-23
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
ARIE IR+ LA ++ KN +YQMDVK+AFL
Sbjct: 1140 ARIEAIRLLLAYSSIKNFKLYQMDVKSAFL 1169
Score = 28.1 bits (61), Expect(3) = 2e-23
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIEC 4
K ++VQIYVDDI+F S + C
Sbjct: 1237 KFKNDTMYVQIYVDDIVFGSTNTSLC 1262
>dbj|GAU46301.1| hypothetical protein TSUD_283270, partial [Trifolium subterraneum]
Length = 1326
Score = 90.5 bits (223), Expect(3) = 2e-23
Identities = 44/67 (65%), Positives = 48/67 (71%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG L E VYV QP FVD P HVY+L KAL GLK APRAWYD LS FLL NGF +G +
Sbjct: 702 NGFLNEEVYVHQPSGFVDKHKPNHVYKLTKALYGLKQAPRAWYDKLSTFLLENGFSRGKI 761
Query: 101 DPTLFTQ 81
D TLFT+
Sbjct: 762 DTTLFTK 768
Score = 36.6 bits (83), Expect(3) = 2e-23
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
AR+E IRI LA A+ K + ++QMDVK+AFL
Sbjct: 672 ARLEAIRILLAYASHKCIKLFQMDVKSAFL 701
Score = 30.0 bits (66), Expect(3) = 2e-23
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 90 IHSKIGKH-LLHVQIYVDDIIFASMDQIECD 1
+ +K KH LL VQ+YVDDIIF + ++ C+
Sbjct: 765 LFTKNEKHNLLIVQVYVDDIIFGATNEKMCE 795
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 93.2 bits (230), Expect(3) = 2e-23
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVYRL KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 668 NGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 727
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 728 DPTLFTKTLENDLFV 742
Score = 36.6 bits (83), Expect(3) = 2e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 638 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 673
Score = 27.3 bits (59), Expect(3) = 2e-23
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 744 QIYVDDIIFGSTNKSTCE 761
>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 772
Score = 89.0 bits (219), Expect(3) = 2e-23
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG ++E VYV QP FVD +P HVY+LKKAL GLK APR+WYD LSKFL+ N + +G V
Sbjct: 616 NGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKV 675
Query: 101 DPTLFTQK*AN 69
D TLF +K N
Sbjct: 676 DNTLFVKKFKN 686
Score = 39.7 bits (91), Expect(3) = 2e-23
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
ARIE IR+ LA ++ KN +YQMDVK+AFL
Sbjct: 586 ARIEAIRLLLAYSSIKNFKLYQMDVKSAFL 615
Score = 28.1 bits (61), Expect(3) = 2e-23
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIEC 4
K ++VQIYVDDI+F S + C
Sbjct: 683 KFKNDTMYVQIYVDDIVFGSTNTSLC 708
>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 749
Score = 89.0 bits (219), Expect(3) = 2e-23
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG ++E VYV QP FVD +P HVY+LKKAL GLK APR+WYD LSKFL+ N + +G V
Sbjct: 355 NGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYERGKV 414
Query: 101 DPTLFTQK*AN 69
D TLF +K N
Sbjct: 415 DNTLFVKKFKN 425
Score = 39.7 bits (91), Expect(3) = 2e-23
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
ARIE IR+ LA ++ KN +YQMDVK+AFL
Sbjct: 325 ARIEAIRLLLAYSSIKNFKLYQMDVKSAFL 354
Score = 28.1 bits (61), Expect(3) = 2e-23
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIEC 4
K ++VQIYVDDI+F S + C
Sbjct: 422 KFKNDTMYVQIYVDDIVFGSTNTSLC 447
>gb|PKU75463.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 365
Score = 83.2 bits (204), Expect(3) = 2e-23
Identities = 42/68 (61%), Positives = 46/68 (67%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F HV++LKKAL GLK APRAWY+ LS FLL GF KG V
Sbjct: 264 NGVIKEDVYVEQPPGFESSQLSNHVFKLKKALYGLKQAPRAWYERLSSFLLDRGFKKGSV 323
Query: 101 DPTLFTQK 78
D TLF QK
Sbjct: 324 DTTLFLQK 331
Score = 39.7 bits (91), Expect(3) = 2e-23
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFL 281
AR+E IR+ LA A KN +YQMDVK+AFL
Sbjct: 234 ARLEAIRVLLAFACFKNFKLYQMDVKSAFL 263
Score = 33.9 bits (76), Expect(3) = 2e-23
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -3
Query: 81 KIGKHLLHVQIYVDDIIFASMDQIECD 1
K+ + +L +QIY DDI+F S D++ CD
Sbjct: 331 KVKEEILIIQIYTDDILFGSSDKMLCD 357
>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
Length = 1760
Score = 92.0 bits (227), Expect(3) = 3e-23
Identities = 44/75 (58%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVY+L KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 1365 NGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 1424
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 1425 DPTLFTKTLENDLFV 1439
Score = 36.6 bits (83), Expect(3) = 3e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 1335 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1370
Score = 27.7 bits (60), Expect(3) = 3e-23
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 1441 QIYVDDIIFGSTNESTCE 1458
>gb|AAN40035.1| putative gag-pol polyprotein [Zea mays]
Length = 1706
Score = 91.7 bits (226), Expect(3) = 3e-23
Identities = 44/75 (58%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVY+L KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 1515 NGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 1574
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 1575 DPTLFTKTLNNDLFV 1589
Score = 36.6 bits (83), Expect(3) = 3e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 1485 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1520
Score = 28.1 bits (61), Expect(3) = 3e-23
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 78 IGKHLLHVQIYVDDIIFASMDQIECD 1
+ L QIYVDDIIF S ++ C+
Sbjct: 1583 LNNDLFVCQIYVDDIIFGSTNESTCE 1608
>gb|AAL66753.1|AF464738_4 putative copia-type pol polyprotein [Zea mays]
Length = 1604
Score = 92.0 bits (227), Expect(3) = 3e-23
Identities = 44/75 (58%), Positives = 52/75 (69%)
Frame = -1
Query: 281 NGELKEVVYVSQPERFVDPDHPTHVYRLKKALCGLKYAPRAWYDTLSKFLLANGFYKGVV 102
NG +KE VYV QP F D ++P HVY+L KAL GLK APRAWY+ L FL+ANGF G
Sbjct: 1365 NGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKA 1424
Query: 101 DPTLFTQK*ANIYFM 57
DPTLFT+ N F+
Sbjct: 1425 DPTLFTKTLENDLFV 1439
Score = 36.6 bits (83), Expect(3) = 3e-23
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 370 ARIETIRIFLANAASKNMIVYQMDVKTAFLTAS*KK 263
AR+E+IRI LA A +YQMDVK+AFL K+
Sbjct: 1335 ARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1370
Score = 27.7 bits (60), Expect(3) = 3e-23
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 54 QIYVDDIIFASMDQIECD 1
QIYVDDIIF S ++ C+
Sbjct: 1441 QIYVDDIIFGSTNESTCE 1458