BLASTX nr result

ID: Chrysanthemum22_contig00045305 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00045305
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07164.1| Pentatricopeptide repeat-containing protein [Cyna...    57   4e-07

>gb|KVI07164.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 512

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 14/73 (19%)
 Frame = +3

Query: 144 MFSITQICHKITHTVTFFY---RPLCSNTNHFTSGFRRIEKYLV------NPNFSLNDD- 293
           MFSI QI HK+   ++ +    R LCSN N F+ GFRRIEKYL       N NF LN++ 
Sbjct: 1   MFSIAQIGHKVVQGISCYCGISRSLCSNGNGFSDGFRRIEKYLTGCQKSSNGNFVLNENH 60

Query: 294 ----NSASTSGRY 320
               +S  TSGRY
Sbjct: 61  EESIDSVGTSGRY 73


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