BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00045065
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP37022.1| Retrovirus-related Pol polyprotein from transposo...    93   1e-20
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo...    94   1e-19
gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposo...    90   2e-19
gb|KYP38714.1| Retrovirus-related Pol polyprotein from transposo...    89   4e-19
gb|KYP38720.1| Retrovirus-related Pol polyprotein from transposo...    89   5e-19
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...    91   6e-19
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo...    91   8e-19
gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposo...    85   2e-17
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    87   3e-17
gb|AOZ57162.1| integrase, partial [Coccinia grandis]                   82   1e-16
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                    85   2e-16
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...    83   6e-16
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...    82   1e-15
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo...    82   1e-15
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo...    82   1e-15
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]     81   3e-15
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    80   5e-15
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         80   5e-15
dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt...    80   1e-14
gb|KYP66112.1| Retrovirus-related Pol polyprotein from transposo...    76   1e-14

>gb|KYP37022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 215

 Score = 92.8 bits (229), Expect = 1e-20
 Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 13/113 (11%)
 Frame = -1

Query: 300 LTNAGDSNIPTLCK----R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVK 136
           + +  D +IP   +    R GH+SERG++ L K+  LGN KL +L FC HC++GK HR+K
Sbjct: 24  VASKSDKDIPDSTQLWHMRLGHMSERGMLTLQKQQLLGNQKLNELKFCEHCVFGKQHRIK 83

Query: 135 FH*GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           F    H   GT        WGP RV SL G R F SI D+Y R  W++I+ HK
Sbjct: 84  FPKAVHTTKGTLDYIHADCWGPSRVPSLGGGRYFLSIIDDYSRMTWIYIMSHK 136


>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 595

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 13/114 (11%)
 Frame = -1

Query: 303 YLTNAGDSNIPTLCK----R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRV 139
           ++ +  D +IP   +    R GH+SERG++ L K+  LGN KL +L FC HC++GK HR+
Sbjct: 34  FVASKSDKDIPDSTQLWHMRLGHMSERGMMTLQKQKLLGNQKLNELKFCEHCVFGKQHRI 93

Query: 138 KFH*GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           KF    H   GT        WGP RV SL G R F SI D+Y R  W++II HK
Sbjct: 94  KFPKVVHTTKGTLDYIHADCWGPSRVLSLGGGRYFLSIIDDYSRMTWIYIISHK 147


>gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 218

 Score = 89.7 bits (221), Expect = 2e-19
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 13/111 (11%)
 Frame = -1

Query: 294 NAGDSNIPTLC----KR*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH 130
           +  + NIP L      R GH+SERG++ L+K+  LGN  +K+L F  HCI+GK HR+KF 
Sbjct: 93  SVAEKNIPDLTYLWHMRLGHMSERGMMILSKQQLLGNHTVKELRFYDHCIFGKEHRIKFP 152

Query: 129 *GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
             +H+   T        WGP +V SL G R F SI DEY R  W+FI+KHK
Sbjct: 153 KAQHSTKSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDEYSRMTWIFIMKHK 203


>gb|KYP38714.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 232

 Score = 89.0 bits (219), Expect = 4e-19
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 9/93 (9%)
 Frame = -1

Query: 252 GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT--------W 100
           GH+SERG++ L+K+  LG+  +K+L FC HC++GK HR+KF   +H    T        W
Sbjct: 131 GHMSERGMMVLSKQQLLGDHIIKELKFCEHCVFGKYHRIKFPKAQHTTKSTLDYVHSDYW 190

Query: 99  GP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           GP RV SL G R F SI D+Y R  W+FI+KHK
Sbjct: 191 GPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHK 223


>gb|KYP38720.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 242

 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 9/93 (9%)
 Frame = -1

Query: 252 GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT--------W 100
           GH+SERG++ L+K+  LG+  +K+L FC HC++GK HR+KF   +H    T        W
Sbjct: 141 GHMSERGMMVLSKQQLLGDHIIKELKFCEHCVFGKYHRIKFPKAQHTTKSTLDYVHSDCW 200

Query: 99  GP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           GP RV SL G R F SI D+Y R  W+FI+KHK
Sbjct: 201 GPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHK 233


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 13/116 (11%)
 Frame = -1

Query: 309 INYLTNAGDSNIPTLC----KR*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAH 145
           I+   +  + NIP L      R GH+SERG++ L+++  LGN  +K+L FC HC++GK H
Sbjct: 170 ISESVSVAEKNIPDLTYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQH 229

Query: 144 RVKFH*GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           R+KF   +H+   T        WGP +V SL G R F SI D+Y R  W+FI KHK
Sbjct: 230 RIKFPKAQHSTKSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHK 285


>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 91.3 bits (225), Expect = 8e-19
 Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 13/116 (11%)
 Frame = -1

Query: 309 INYLTNAGDSNIPTLC----KR*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAH 145
           I+   +  + NIP L      R GH+SERG++ L+++  LGN  +K+L FC HC++GK H
Sbjct: 29  ISESVSVAEKNIPDLTYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQH 88

Query: 144 RVKFH*GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
           R+KF   +H+   T        WGP +V SL G R F SI D+Y R  W+FI KHK
Sbjct: 89  RIKFPKAQHSTKSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHK 144


>gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT------- 103
           R GH+SERG++ L+K+  L +  +K+L FC HC+ GK HR+KF   +H    T       
Sbjct: 2   RLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRIKFPKAQHTTKSTLDYVHSN 61

Query: 102 -WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV SL G R F SI D+Y R  W+FI+KHK
Sbjct: 62  CWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHK 96


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
 Frame = -1

Query: 315 DLINYLTNAGDSNIPTLCK----R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGK 151
           +LI+   +  D + P L      R GH+SERG++ L K+  LG+  +K+L FC HC+ GK
Sbjct: 329 NLISESVSVADKHTPDLTHLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCVVGK 388

Query: 150 AHRVKFH*GKHNKVGT--------WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            HR+KF   +H    T        WGP RV SL G R F SI D+Y    W+FI+KHK
Sbjct: 389 HHRIKFPKAQHTTKSTLDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHK 446


>gb|AOZ57162.1| integrase, partial [Coccinia grandis]
          Length = 226

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTK-ECLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT------- 103
           R GH+SE+G+  L++ + L   K++ L FC HC++GK HR KF  G H   GT       
Sbjct: 5   RLGHMSEKGMQILSRRDLLCGHKVQDLEFCEHCVFGKLHRRKFSKGAHRTRGTLDYIHSD 64

Query: 102 -WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV S+ G R F SI D+Y R  WVF++KHK
Sbjct: 65  CWGPSRVESVGGSRYFMSIIDDYSRMTWVFMMKHK 99


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT------- 103
           R GHVSERG++EL K+  LG  K++KL FC  C++GK+ RVKF+ GK    G+       
Sbjct: 418 RLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKFNKGKQRTHGSLDYIHAD 477

Query: 102 -WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP R  S SG R F SI D+Y R+ WVFI K K
Sbjct: 478 LWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKTK 512


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT------- 103
           R GH+SERG++ L+K+  L +  +K+L FC HC+ GK HR KF   +H    T       
Sbjct: 404 RLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRSKFPKAQHTTKSTLDYVHSN 463

Query: 102 -WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV SL G R F SI D+Y R  W+FI+KHK
Sbjct: 464 CWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHK 498


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGT------- 103
           R GH+ ERG+  L+KE  L   K+K L FC HC++GK HR KF    H   GT       
Sbjct: 417 RLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSD 476

Query: 102 -WGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV SL G R F SI D+Y R  WV+++KHK
Sbjct: 477 CWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHK 511


>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 498

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNK--------VG 106
           R GHVSERG+IEL K+  L   KL KL FC HC+ GK+HRVKF  G H            
Sbjct: 20  RLGHVSERGLIELEKQNLLKGDKLDKLEFCEHCVLGKSHRVKFGTGIHVSSRPFEYVHAD 79

Query: 105 TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV +L G   F +I D++ RR W++++K K
Sbjct: 80  LWGPSRVKTLGGGSYFLTIIDDFTRRVWLYVLKDK 114


>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 780

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNK--------VG 106
           R GHVSERG+IEL K+  L   KL KL FC HC+ GK+HRVKF  G H            
Sbjct: 423 RLGHVSERGLIELEKQNLLKGDKLDKLEFCEHCVLGKSHRVKFGTGIHVSSRPFEYVHAD 482

Query: 105 TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP RV +L G   F +I D++ RR W++++K K
Sbjct: 483 LWGPSRVKTLGGGSYFLTIIDDFTRRVWLYVLKDK 517


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 9/96 (9%)
 Frame = -1

Query: 261 KR*GHVSERGIIELTK-ECLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVG------- 106
           +R GH+S++G+ EL K E LGN   ++  FC HCI GK+HRV+F  G H+  G       
Sbjct: 419 RRLGHISDQGLNELKKQEVLGNFDGREAGFCEHCILGKSHRVRFTKGIHSTKGILDYVHA 478

Query: 105 -TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
             WGP R  SL G   F SI D++ RR WV+++K K
Sbjct: 479 DLWGPARTISLGGALYFLSIVDDFSRRVWVYVLKGK 514


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
 Frame = -1

Query: 261 KR*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVG------- 106
           +R GH+S RG+ EL K+  LGN KL  L FC HC++GKA RVKF    H           
Sbjct: 396 QRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHS 455

Query: 105 -TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
             WGP RV S+ G R F ++ D+Y R+ W++ +K+K
Sbjct: 456 DLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNK 491


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNK--------VG 106
           R GH+S +G+ EL+K+  LG  ++++L FC +CI+GK+HR KF+ G+H          + 
Sbjct: 429 RLGHMSIKGLQELSKQGLLGGDRIQQLEFCENCIFGKSHRSKFNKGEHMSKQVLDYAHID 488

Query: 105 TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP +V SLSG R F S+ D+Y R+ W++I+K K
Sbjct: 489 HWGPAQVPSLSGGRYFMSLIDDYSRKVWIYILKIK 523


>dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum]
          Length = 1006

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 46/95 (48%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNK--------VG 106
           R GHVSERG++EL K+  LG  KL KL+FC +C  GK H+VKF  G H            
Sbjct: 249 RLGHVSERGLVELAKQGLLGQEKLNKLDFCDNCTLGKQHKVKFGVGVHKSSRPFEYVHSD 308

Query: 105 TWGP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
            WGP  V +  G   F SI D+Y RR WV IIK+K
Sbjct: 309 LWGPASVPTHGGGSYFLSIIDDYSRRVWVHIIKNK 343


>gb|KYP66112.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 190

 Score = 76.3 bits (186), Expect = 1e-14
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = -1

Query: 258 R*GHVSERGIIELTKE-CLGNMKLKKLNFCVHCIYGKAHRVKFH*GKHNKVGTW------ 100
           R GH+SERG++ L+++  LGN  +K+L F   C++GK HR+KF   +H+   T       
Sbjct: 45  RLGHMSERGMMILSRQQLLGNHTVKELRFYEQCVFGKQHRIKFPKAQHSTKSTLDYIHSD 104

Query: 99  --GP*RV*SLSGQRRFFSIPDEY*RRAWVFIIKHK 1
             GP +V SL G R F SI D Y R  W+FI+KHK
Sbjct: 105 CRGPSQVPSLGGGRYFLSIIDNYSRMTWIFIMKHK 139