BLASTX nr result

ID: Chrysanthemum22_contig00044358 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00044358
         (493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11302.1| hypothetical protein Ccrd_010289 [Cynara carduncu...   104   6e-23
ref|XP_022015990.1| protein SCAR2 isoform X3 [Helianthus annuus]       81   1e-14
ref|XP_022015989.1| protein SCAR2 isoform X2 [Helianthus annuus]       81   1e-14
ref|XP_022015988.1| protein SCAR2 isoform X1 [Helianthus annuus]...    81   1e-14
ref|XP_023769019.1| protein SCAR2-like [Lactuca sativa] >gi|1322...    74   3e-12

>gb|KVI11302.1| hypothetical protein Ccrd_010289 [Cynara cardunculus var. scolymus]
          Length = 1433

 Score =  104 bits (260), Expect = 6e-23
 Identities = 77/188 (40%), Positives = 103/188 (54%), Gaps = 27/188 (14%)
 Frame = -2

Query: 489  DDFPVVKETADNLDIYSLPEQQLEDIADGVLCKSGPEEAKVSYPIEDDTEGAKVSEIEMV 310
            DD PV +  ADN DIYS  ++Q ++IAD +L      EA V Y  ED+T+    ++IE++
Sbjct: 715  DDVPVAEVAADNPDIYS--KEQFKEIADDILHIPDLAEAIVPYSSEDETKSNN-AKIELM 771

Query: 309  TVAVSDLLDV-----------REETELGVREREV---------NPVPSPDNVDRKDGKDL 190
            T AVSD+ DV           ++E EL  R +E          NPV  PD++D  +G DL
Sbjct: 772  TGAVSDVADVNRSGGNDLSALKDEAELEERAKESVKSEVKVGSNPVSVPDDLDINEGNDL 831

Query: 189  ---EDDTEKEGIDADSVNTEMEMSAVVYLPVDVHKKDDNVPSTFE----NHSVIDQLHIF 31
               EDD E E  + DS+N E+E  A V L VDV K +DN  ST E    + SVI  L   
Sbjct: 832  STLEDDVELEAREVDSINLEVEKRAAVLLLVDVDKNEDNCCSTLEEPDGSRSVISHLCNE 891

Query: 30   QDSKEPGE 7
            Q+S+E GE
Sbjct: 892  QNSQESGE 899


>ref|XP_022015990.1| protein SCAR2 isoform X3 [Helianthus annuus]
          Length = 1136

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
 Frame = -2

Query: 450 DIYSLPEQQLEDIADGVLCKSGPEEAKVSYPIEDDTEGAKVSEIEMVTVAVSDLLDVREE 271
           D  S+ E+QL+D  +GVL  S   EA+VSY    +TE    SEIE VTVA ++  +  ++
Sbjct: 537 DNNSVTEEQLKDKGEGVLVISDQAEARVSYSSGHETESHN-SEIESVTVAAANKNECVDD 595

Query: 270 TEL----GVREREVNPVPSPDNVDRKDGKDLEDDTEKEGIDADSVNTEMEMSAVVYLPVD 103
           + L    G+  +E     S   +   D K L DDT+ E I+ADSVN++ME    V L VD
Sbjct: 596 SVLKDGTGIESKE-----SEIELAYSDDKGLGDDTKLERIEADSVNSDMETHCAVVLHVD 650

Query: 102 VHKKDDNVPSTFENHSVIDQLHIFQDSKEPGE 7
           V + DDN      +H+V +     QDSKE GE
Sbjct: 651 VDRHDDN------DHAVSE-----QDSKESGE 671


>ref|XP_022015989.1| protein SCAR2 isoform X2 [Helianthus annuus]
          Length = 1180

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
 Frame = -2

Query: 450 DIYSLPEQQLEDIADGVLCKSGPEEAKVSYPIEDDTEGAKVSEIEMVTVAVSDLLDVREE 271
           D  S+ E+QL+D  +GVL  S   EA+VSY    +TE    SEIE VTVA ++  +  ++
Sbjct: 581 DNNSVTEEQLKDKGEGVLVISDQAEARVSYSSGHETESHN-SEIESVTVAAANKNECVDD 639

Query: 270 TEL----GVREREVNPVPSPDNVDRKDGKDLEDDTEKEGIDADSVNTEMEMSAVVYLPVD 103
           + L    G+  +E     S   +   D K L DDT+ E I+ADSVN++ME    V L VD
Sbjct: 640 SVLKDGTGIESKE-----SEIELAYSDDKGLGDDTKLERIEADSVNSDMETHCAVVLHVD 694

Query: 102 VHKKDDNVPSTFENHSVIDQLHIFQDSKEPGE 7
           V + DDN      +H+V +     QDSKE GE
Sbjct: 695 VDRHDDN------DHAVSE-----QDSKESGE 715


>ref|XP_022015988.1| protein SCAR2 isoform X1 [Helianthus annuus]
 gb|OTF91344.1| putative WH2 domain, SCAR/WAVE family [Helianthus annuus]
          Length = 1201

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
 Frame = -2

Query: 450  DIYSLPEQQLEDIADGVLCKSGPEEAKVSYPIEDDTEGAKVSEIEMVTVAVSDLLDVREE 271
            D  S+ E+QL+D  +GVL  S   EA+VSY    +TE    SEIE VTVA ++  +  ++
Sbjct: 602  DNNSVTEEQLKDKGEGVLVISDQAEARVSYSSGHETESHN-SEIESVTVAAANKNECVDD 660

Query: 270  TEL----GVREREVNPVPSPDNVDRKDGKDLEDDTEKEGIDADSVNTEMEMSAVVYLPVD 103
            + L    G+  +E     S   +   D K L DDT+ E I+ADSVN++ME    V L VD
Sbjct: 661  SVLKDGTGIESKE-----SEIELAYSDDKGLGDDTKLERIEADSVNSDMETHCAVVLHVD 715

Query: 102  VHKKDDNVPSTFENHSVIDQLHIFQDSKEPGE 7
            V + DDN      +H+V +     QDSKE GE
Sbjct: 716  VDRHDDN------DHAVSE-----QDSKESGE 736


>ref|XP_023769019.1| protein SCAR2-like [Lactuca sativa]
 gb|PLY81495.1| hypothetical protein LSAT_8X104101 [Lactuca sativa]
          Length = 919

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
 Frame = -2

Query: 486 DFPVVKETADNLDIYSLPEQQLEDIADGVLCKSGPEEAKVSYPIEDDTEGAKVSEIEMVT 307
           D  VV+ET D+ + +SLPE++L +I D        +E KVS  IED+ E           
Sbjct: 488 DDSVVEETLDSCEKFSLPEEKLNEIGD--------DEPKVSSFIEDEKE----------- 528

Query: 306 VAVSDLLDVREETELGVREREVNPVPSPDNVDRKDGK---DLEDDTEKEGIDADSVNTEM 136
                     +E E G+    VN   +PD+VDR D K    LEDDT+ EG + DSV+ +M
Sbjct: 529 ---------LKERETGL----VNSETTPDDVDRNDDKALSTLEDDTKSEGREEDSVDPKM 575

Query: 135 EMSAVVYLPVDVHKKDDN 82
           E + VV LP+DV+  ++N
Sbjct: 576 EKNVVVLLPLDVNTNENN 593


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