BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00044045
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH94815.1| Double-stranded RNA-binding [Cynara cardunculus v...    57   2e-06
ref|XP_008388216.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_017184498.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_017184497.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_009344717.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_008359783.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_009344716.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_008370073.1| PREDICTED: RNA polymerase II C-terminal doma...    56   2e-06
ref|XP_009377793.1| PREDICTED: RNA polymerase II C-terminal doma...    56   3e-06
ref|XP_022010325.1| RNA polymerase II C-terminal domain phosphat...    54   1e-05
ref|XP_022010324.1| RNA polymerase II C-terminal domain phosphat...    54   1e-05
gb|OTF93687.1| putative carboxyl-terminal domain (ctd) phosphata...    54   1e-05
ref|XP_011047440.1| PREDICTED: RNA polymerase II C-terminal doma...    54   1e-05

>gb|KVH94815.1| Double-stranded RNA-binding [Cynara cardunculus var. scolymus]
          Length = 756

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/40 (72%), Positives = 30/40 (75%)
 Frame = +3

Query: 300 VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           VYHGET LGELDVI      F +FPNNEIRIH FSQ SER
Sbjct: 11  VYHGETCLGELDVIPTGDKSF-QFPNNEIRIHHFSQVSER 49


>ref|XP_008388216.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           [Malus domestica]
          Length = 539

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_017184498.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X3 [Malus domestica]
          Length = 790

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_017184497.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X2 [Malus domestica]
          Length = 799

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_009344717.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X2 [Pyrus x bretschneideri]
          Length = 814

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_008359783.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X1 [Malus domestica]
 ref|XP_017184496.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X1 [Malus domestica]
          Length = 814

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_009344716.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X1 [Pyrus x bretschneideri]
          Length = 847

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELCLGELDAIPVTEGSF-QFPNNEIRIHRISQQSER 48


>ref|XP_008370073.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           [Malus domestica]
          Length = 850

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELRLGELDAIPVTDGNF-RFPNNEIRIHRISQQSER 48


>ref|XP_009377793.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           [Pyrus x bretschneideri]
          Length = 846

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELD I    G F +FPNNEIRIHR SQ SER
Sbjct: 1   MSRLGFKSVVYHGELRLGELDAIPVTDGNF-QFPNNEIRIHRISQQSER 48


>ref|XP_022010325.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2
           [Helianthus annuus]
          Length = 715

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/40 (72%), Positives = 29/40 (72%)
 Frame = +3

Query: 300 VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           VYHGE  LGELDVI  A   F  FPNNEIRIH FSQ SER
Sbjct: 12  VYHGEACLGELDVIPTADKTF-HFPNNEIRIHHFSQLSER 50


>ref|XP_022010324.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
           [Helianthus annuus]
          Length = 717

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/40 (72%), Positives = 29/40 (72%)
 Frame = +3

Query: 300 VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           VYHGE  LGELDVI  A   F  FPNNEIRIH FSQ SER
Sbjct: 12  VYHGEACLGELDVIPTADKTF-HFPNNEIRIHHFSQLSER 50


>gb|OTF93687.1| putative carboxyl-terminal domain (ctd) phosphatase-like 2
           [Helianthus annuus]
          Length = 735

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/40 (72%), Positives = 29/40 (72%)
 Frame = +3

Query: 300 VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           VYHGE  LGELDVI  A   F  FPNNEIRIH FSQ SER
Sbjct: 12  VYHGEACLGELDVIPTADKTF-HFPNNEIRIHHFSQLSER 50


>ref|XP_011047440.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X2 [Populus euphratica]
          Length = 763

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 MGEVGLK--VYHGETLLGELDVITEAIGGFGKFPNNEIRIHRFSQTSER 419
           M  +G K  VYHGE  LGELDVI     GF  FPNNEIRIH  SQ SER
Sbjct: 1   MSRLGFKSLVYHGEVCLGELDVIPVTEKGF-LFPNNEIRIHHISQQSER 48