BLASTX nr result
ID: Chrysanthemum22_contig00044005
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00044005
(532 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF96050.1| putative nucleic acid-binding, OB-fold protein [H... 46 1e-07
ref|XP_022012857.1| replication factor A protein 1-like [Heliant... 46 1e-07
ref|XP_021995014.1| replication protein A 70 kDa DNA-binding sub... 44 5e-07
ref|XP_020406449.1| uncharacterized protein LOC103652044 [Zea mays] 43 9e-07
gb|AQK85412.1| hypothetical protein ZEAMMB73_Zm00001d037977 [Zea... 43 1e-06
gb|ONM29156.1| Retrotransposon-like protein [Zea mays] 40 2e-06
gb|ONM29155.1| Retrotransposon-like protein [Zea mays] 40 2e-06
gb|AQL07860.1| hypothetical protein ZEAMMB73_Zm00001d047872 [Zea... 39 4e-06
gb|ACG45577.1| retrotransposon protein [Zea mays] 39 7e-06
>gb|OTF96050.1| putative nucleic acid-binding, OB-fold protein [Helianthus annuus]
Length = 457
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 LKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID-DCFPEHYFDFADFTGVQS 180
L+ Y+I +GC + DN TL + T+ G T I I D + P+ YF+ A ++
Sbjct: 73 LQTCYQIKGYGCTDPDNFTNTLTHPATMNLGNATVITSIPDNENIPKQYFELATRRRMEV 132
Query: 181 RADKGNTILTDYIGYIERLDEERMTSQTTRRDI-EIYNLQGRRILFTLWNTMA 336
+A + DYIG ++R E++ T + + + + I F LW +A
Sbjct: 133 QAKTEG--IVDYIGLLQRRIEDKKTHDNRPYVVLSLKDCSNQDITFALWEEIA 183
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 377 PVVIAVSSCWAKHFRG-LQLSSTRATEYYFSPRIPETEHIQAVF 505
PV++A++ AK + G LQLSST AT Y +P+ ETE ++ ++
Sbjct: 200 PVILAMTGLKAKTYYGTLQLSSTAATHVYLNPQTVETETLKEMY 243
>ref|XP_022012857.1| replication factor A protein 1-like [Helianthus annuus]
ref|XP_022012858.1| replication factor A protein 1-like [Helianthus annuus]
ref|XP_022012859.1| replication factor A protein 1-like [Helianthus annuus]
Length = 449
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 LKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID-DCFPEHYFDFADFTGVQS 180
L+ Y+I +GC + DN TL + T+ G T I I D + P+ YF+ A ++
Sbjct: 65 LQTCYQIKGYGCTDPDNFTNTLTHPATMNLGNATVITSIPDNENIPKQYFELATRRRMEV 124
Query: 181 RADKGNTILTDYIGYIERLDEERMTSQTTRRDI-EIYNLQGRRILFTLWNTMA 336
+A + DYIG ++R E++ T + + + + I F LW +A
Sbjct: 125 QAKTEG--IVDYIGLLQRRIEDKKTHDNRPYVVLSLKDCSNQDITFALWEEIA 175
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 377 PVVIAVSSCWAKHFRG-LQLSSTRATEYYFSPRIPETEHIQAVF 505
PV++A++ AK + G LQLSST AT Y +P+ ETE ++ ++
Sbjct: 192 PVILAMTGLKAKTYYGTLQLSSTAATHVYLNPQTVETETLKEMY 235
>ref|XP_021995014.1| replication protein A 70 kDa DNA-binding subunit A-like [Helianthus
annuus]
Length = 453
Score = 43.9 bits (102), Expect(2) = 5e-07
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 4 LKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID-DCFPEHYFDFADFTGVQS 180
L+ Y+I +GC + DN TL + T+ G T I I D + P+ YF+ A ++
Sbjct: 65 LQTCYQIKGYGCTDPDNFTNTLTHPATMNLGNATIITSIPDNENIPKQYFELATRRRMEV 124
Query: 181 RADKGNTILTDYIGYIERLDEERMTSQTTRRDI-EIYNLQGRRILFTLWNTMA 336
+A + DYIG ++R E++ T + + + + + I LW +A
Sbjct: 125 QAKTEG--IVDYIGLLQRRIEDKKTHENRPYVVLSLKDCSNQDITVALWEEIA 175
Score = 37.4 bits (85), Expect(2) = 5e-07
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 377 PVVIAVSSCWAKHFRG-LQLSSTRATEYYFSPRIPETEHIQAVF 505
PV++A++ AK + G LQLSST AT Y +P+ ETE ++ ++
Sbjct: 192 PVILAMTGLKAKTYYGTLQLSSTSATHVYLNPQTVETETLKEMY 235
>ref|XP_020406449.1| uncharacterized protein LOC103652044 [Zea mays]
Length = 485
Score = 42.7 bits (99), Expect(2) = 9e-07
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID--DCFPEHYFDFADFTGV 174
+++ Y + F + N + + N + F YTQ ++ D FP + + F +
Sbjct: 69 EIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTSFENI 128
Query: 175 QSRADKGNTILTDYIGYIERLDEERM---TSQTTRRDIEIYNLQGRRILFTLWNTMA 336
+ D T L D +G + ++D + + T RDI I N + TLW A
Sbjct: 129 EDNIDN-RTYLIDVLGMLTQIDPPHLIGYNNSTIIRDIYIKNASDMSLKITLWGNQA 184
Score = 37.7 bits (86), Expect(2) = 9e-07
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 LYGTQWQKNSRTEDYLQAT-PPVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
L+G Q S ++ Y Q++ P+VI + AK F+G LS T A+ +YF+P IPE +
Sbjct: 179 LWGNQASNFSISDVYNQSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQ 237
>gb|AQK85412.1| hypothetical protein ZEAMMB73_Zm00001d037977 [Zea mays]
Length = 681
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID--DCFPEHYFDFADFTGV 174
+++ Y + F + N + + N + F YTQ ++ D FP + + F +
Sbjct: 225 EIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTSFENI 284
Query: 175 QSRADKGNTILTDYIGYIERLDEERM---TSQTTRRDIEIYNLQGRRILFTLWNTMA 336
+ D T L D +G + ++D + + T RDI I N + TLW A
Sbjct: 285 EDNIDN-RTYLIDVLGMLTQIDPPHLIGYNNSTIIRDIYIKNASDMSLKITLWGNQA 340
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 LYGTQWQKNSRTEDYLQA-TPPVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
L+G Q S ++ Y Q+ P+VI + AK F+G LS T A+ +YF+P IPE +
Sbjct: 335 LWGNQASNFSISDVYNQSINQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQ 393
>gb|ONM29156.1| Retrotransposon-like protein [Zea mays]
Length = 916
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIIDD--CFPEHYFDFADFTGV 174
Q++ Y I F + + + R ++N + F YTQ ++ D FP + ++ F +
Sbjct: 460 QIEKVYEIRRFRVVSSRSYFRPVQNNLMIQFTLYTQAKVVKDPPHIFPIYIYNLTSFEKI 519
Query: 175 QSRADKGNTILTDYIGYIERLDEERMTSQTTR---RDIEIYNLQGRRILFTLWNTMA 336
+ D N ++ D IG + ++ + RDI I N+ + TLW A
Sbjct: 520 EESVDNKNYLI-DAIGMLTQIGAPHVAGYNNSSIVRDIFIKNISDASLKITLWGDQA 575
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 377 PVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
P+VI C AK F+G LS T AT +YF+P IPE +
Sbjct: 591 PIVIMFVGCLAKQFKGQSYLSGTAATTWYFNPDIPEAQ 628
>gb|ONM29155.1| Retrotransposon-like protein [Zea mays]
Length = 821
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIIDD--CFPEHYFDFADFTGV 174
Q++ Y I F + + + R ++N + F YTQ ++ D FP + ++ F +
Sbjct: 460 QIEKVYEIRRFRVVSSRSYFRPVQNNLMIQFTLYTQAKVVKDPPHIFPIYIYNLTSFEKI 519
Query: 175 QSRADKGNTILTDYIGYIERLDEERMTSQTTR---RDIEIYNLQGRRILFTLWNTMA 336
+ D N ++ D IG + ++ + RDI I N+ + TLW A
Sbjct: 520 EESVDNKNYLI-DAIGMLTQIGAPHVAGYNNSSIVRDIFIKNISDASLKITLWGDQA 575
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 377 PVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
P+VI C AK F+G LS T AT +YF+P IPE +
Sbjct: 591 PIVIMFVGCLAKQFKGQSYLSGTAATTWYFNPDIPEAQ 628
>gb|AQL07860.1| hypothetical protein ZEAMMB73_Zm00001d047872 [Zea mays]
Length = 523
Score = 39.3 bits (90), Expect(2) = 4e-06
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID--DCFPEHYFDFADFTGV 174
+++ Y + F + N + + N + F YTQ ++ D FP + + F +
Sbjct: 69 EIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENI 128
Query: 175 QSRADKGNTILTDYIGYIERLDEERM---TSQTTRRDIEIYNLQGRRILFTLWNTMA 336
+ D T L D +G + +++ + + T RDI I N + TLW A
Sbjct: 129 EDNIDN-RTYLIDVLGMLTQINPPHLIGYNNSTIIRDIFIENTSDMSLKITLWGNQA 184
Score = 38.9 bits (89), Expect(2) = 4e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 LYGTQWQKNSRTEDYLQAT-PPVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
L+G Q S ++ Y Q+ P+VI + AK F+G LSST A+ +YF+P IPE +
Sbjct: 179 LWGNQASSFSISDVYNQSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQ 237
>gb|ACG45577.1| retrotransposon protein [Zea mays]
Length = 525
Score = 39.3 bits (90), Expect(2) = 7e-06
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 QLKNTYRICCFGCMETDN*KRTLKNGTTLAFGKYTQIDLIID--DCFPEHYFDFADFTGV 174
+++ Y + F + N + + N + F YTQ ++ D FP + + F +
Sbjct: 69 EIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENI 128
Query: 175 QSRADKGNTILTDYIGYIERLDEERM---TSQTTRRDIEIYNLQGRRILFTLWNTMA 336
+ D T L D +G + +++ + + T RDI I N + TLW A
Sbjct: 129 EDNIDN-RTYLIDVLGMLTQINPPHLIGYNNSTIIRDIFIKNTSDMSLKITLWGNQA 184
Score = 38.1 bits (87), Expect(2) = 7e-06
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 LYGTQWQKNSRTEDYLQAT-PPVVIAVSSCWAKHFRGLQ-LSSTRATEYYFSPRIPETE 487
L+G Q S + Y Q+ P+VI + AK F+G LSST A+ +YF+P IPE +
Sbjct: 179 LWGNQASGFSINDVYSQSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQ 237