BLASTX nr result

ID: Chrysanthemum22_contig00043871 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043871
         (662 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF98299.1| putative ARID DNA-binding domain-containing prote...    59   1e-06

>gb|OTF98299.1| putative ARID DNA-binding domain-containing protein [Helianthus
           annuus]
          Length = 460

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
 Frame = -1

Query: 422 IGESSKLSRRDKRAR-CYICKKRGHVYWXXXXXXXXXXXENMESIATKTANPEPFKYQPE 246
           I E ++  RR +R R CY C   GH  +            + ES   + A     + Q E
Sbjct: 7   IDEKNERKRRSRRERLCYYCHLPGHQIYTCKSKEN-----DEESQLIRQAINNGIRTQRE 61

Query: 245 TVHVTSDYMVEGSDLNNWDDIWYVSAIYKKHMCPMKHLFKRMIQRFKVEGTEEREKRFIV 66
            VH   + +V G+D   W+DIWYV+  +  H     ++FKR+     VE T      F+ 
Sbjct: 62  EVHCREEMIVTGTDGGQWNDIWYVNPTFCHHFVNNLNVFKRVKHIMGVE-TRSGMNNFLF 120

Query: 65  SYGIGEAYVMTREGRLVIPNV 3
             G+G A V      L +P+V
Sbjct: 121 IRGVGIAEVKMGNETLSVPSV 141


Top