BLASTX nr result

ID: Chrysanthemum22_contig00043764 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043764
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97127.1| Mitochodrial transcription termination factor-rel...    63   6e-09
ref|XP_019188089.1| PREDICTED: transcription termination factor ...    62   9e-09
ref|XP_023732163.1| transcription termination factor MTERF4, chl...    62   1e-08
ref|XP_019241043.1| PREDICTED: transcription termination factor ...    61   3e-08
ref|XP_016463513.1| PREDICTED: uncharacterized protein LOC107786...    60   4e-08
gb|PHT35494.1| hypothetical protein CQW23_23194 [Capsicum baccatum]    60   8e-08
ref|XP_016545454.1| PREDICTED: uncharacterized protein LOC107845...    60   8e-08
ref|XP_009630643.1| PREDICTED: transcription termination factor ...    59   1e-07
gb|KFK37224.1| hypothetical protein AALP_AA4G229700 [Arabis alpina]    58   3e-07
ref|XP_006351168.1| PREDICTED: uncharacterized protein LOC102593...    57   7e-07
ref|XP_015056562.1| PREDICTED: uncharacterized protein LOC107002...    56   1e-06
ref|XP_010312820.1| PREDICTED: transcription termination factor ...    56   1e-06
ref|XP_009772551.1| PREDICTED: uncharacterized protein LOC104222...    56   2e-06
ref|XP_012470653.1| PREDICTED: uncharacterized protein LOC105788...    54   8e-06

>gb|KVH97127.1| Mitochodrial transcription termination factor-related protein
           [Cynara cardunculus var. scolymus]
          Length = 504

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPN----PAKPSLNPSKFTVL---PFSTQSSKFPEY 23
           M+ +L+R Q+ KS + N  HF          P KPS  P +F VL   PFST+SSKFPEY
Sbjct: 1   MMFLLRRKQSFKSFLINPLHFTSNKSKGIIFPPKPSQEP-QFRVLSFQPFSTRSSKFPEY 59

Query: 22  EMPTVTW 2
           EMPTVTW
Sbjct: 60  EMPTVTW 66


>ref|XP_019188089.1| PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Ipomoea nil]
          Length = 499

 Score = 62.4 bits (150), Expect = 9e-09
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIK-NQFHFIPKSPNPAKPS-LNPSKFTVLPFSTQSSKFPEYEMPTV 8
           M SI++RNQ +K ++K ++  F+  S NP + +   P    +LPFSTQSSKFPEYEMP+V
Sbjct: 1   MTSIVRRNQPIKEILKRHRTQFLKPSQNPQQQNKCLPRAEAMLPFSTQSSKFPEYEMPSV 60

Query: 7   TW 2
           TW
Sbjct: 61  TW 62


>ref|XP_023732163.1| transcription termination factor MTERF4, chloroplastic [Lactuca
           sativa]
          Length = 509

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPK-----------SPNPA-KPSLN-PSKFTVLPFSTQS 41
           M+ +L+R    KS + N  HF+             SP P+ KP +N P   +  PFSTQS
Sbjct: 1   MIFLLRRKHAFKSSLTNPIHFVSNESKGYIIPPLMSPKPSQKPQINNPRVLSFKPFSTQS 60

Query: 40  SKFPEYEMPTVTW 2
           SKFPEYEMPTVTW
Sbjct: 61  SKFPEYEMPTVTW 73


>ref|XP_019241043.1| PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Nicotiana attenuata]
 gb|OIT19785.1| transcription termination factor mterf4, chloroplastic [Nicotiana
           attenuata]
          Length = 502

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 13/73 (17%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPSK-------------FTVLPFSTQS 41
           M SIL+RNQ+LKS+++      PK P   KP+L P K                +PFST S
Sbjct: 1   MSSILRRNQSLKSILRT-----PKDPF-TKPTLKPYKNPQTSSTYFPPRVLNQIPFSTHS 54

Query: 40  SKFPEYEMPTVTW 2
           SKFPEYEMPTVTW
Sbjct: 55  SKFPEYEMPTVTW 67


>ref|XP_016463513.1| PREDICTED: uncharacterized protein LOC107786540 [Nicotiana tabacum]
          Length = 503

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPSK-------------FTVLPFSTQS 41
           M SIL+RNQ+LKS+++      PK P   KP+L P K                + FST S
Sbjct: 1   MTSILRRNQSLKSILRT-----PKDPFFTKPTLKPYKNPQTSSTYFLPRVLNQIYFSTHS 55

Query: 40  SKFPEYEMPTVTW 2
           SKFPEYEMPTVTW
Sbjct: 56  SKFPEYEMPTVTW 68


>gb|PHT35494.1| hypothetical protein CQW23_23194 [Capsicum baccatum]
          Length = 493

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -1

Query: 181 MLSILKRNQT-LKSLIKNQFHFIPKSPNPAKPSLNPSKFTVLPFSTQSSKFPEYEMPTVT 5
           M +I++RNQ+ LK+++K+QF          KP  NP      PFST SSKFPEYEMPTVT
Sbjct: 1   MTTIMRRNQSSLKAILKDQFF-----NTILKPYKNPKVINQKPFSTNSSKFPEYEMPTVT 55

Query: 4   W 2
           W
Sbjct: 56  W 56


>ref|XP_016545454.1| PREDICTED: uncharacterized protein LOC107845566 [Capsicum annuum]
 ref|XP_016545455.1| PREDICTED: uncharacterized protein LOC107845566 [Capsicum annuum]
 ref|XP_016545457.1| PREDICTED: uncharacterized protein LOC107845566 [Capsicum annuum]
 ref|XP_016545458.1| PREDICTED: uncharacterized protein LOC107845566 [Capsicum annuum]
 gb|PHT69548.1| hypothetical protein T459_24652 [Capsicum annuum]
          Length = 493

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -1

Query: 181 MLSILKRNQT-LKSLIKNQFHFIPKSPNPAKPSLNPSKFTVLPFSTQSSKFPEYEMPTVT 5
           M +I++RNQ+ LK+++K+QF          KP  NP      PFST SSKFPEYEMPTVT
Sbjct: 1   MTTIMRRNQSSLKTILKDQFF-----NTILKPYKNPKVINQKPFSTNSSKFPEYEMPTVT 55

Query: 4   W 2
           W
Sbjct: 56  W 56


>ref|XP_009630643.1| PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 503

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPSK-------------FTVLPFSTQS 41
           M SIL+RNQ+LK++++      PK P   KP+L P K                + FST S
Sbjct: 1   MTSILRRNQSLKTILRT-----PKDPFFTKPTLKPYKNPQTSSTYFLPRVLNQIYFSTHS 55

Query: 40  SKFPEYEMPTVTW 2
           SKFPEYEMPTVTW
Sbjct: 56  SKFPEYEMPTVTW 68


>gb|KFK37224.1| hypothetical protein AALP_AA4G229700 [Arabis alpina]
          Length = 505

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
 Frame = -1

Query: 172 ILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPSKFTVLPFS--------TQSSKFPEYEM 17
           +LKRN+ L SL+KNQ+  +P + +  K   NP   +  PFS        TQSSKFPEYEM
Sbjct: 5   LLKRNKFL-SLLKNQYLLLPITSSATKTLTNPDPQSQNPFSIFKISHYATQSSKFPEYEM 63

Query: 16  PTVTW 2
           PTVTW
Sbjct: 64  PTVTW 68


>ref|XP_006351168.1| PREDICTED: uncharacterized protein LOC102593486 [Solanum tuberosum]
          Length = 492

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPS---KFTVL---PFSTQSSKFPEYE 20
           M SI++RNQ+LK++ +N          P  P  NP     + VL   PFST SSKFPEYE
Sbjct: 1   MTSIIRRNQSLKTIFRN----------PKDPFFNPIYKIPYRVLNQKPFSTHSSKFPEYE 50

Query: 19  MPTVTW 2
           MPTVTW
Sbjct: 51  MPTVTW 56


>ref|XP_015056562.1| PREDICTED: uncharacterized protein LOC107002878 [Solanum pennellii]
          Length = 498

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSP---NPAKPSLNP-SKFTVL---PFSTQSSKFPEY 23
           M SI++RNQ+LK++ +N     PK     +  KP   P + + VL   PFST SSKFPEY
Sbjct: 1   MTSIIRRNQSLKTIFRN-----PKDSFFNSTLKPYRTPQAPYRVLNQKPFSTHSSKFPEY 55

Query: 22  EMPTVTW 2
           EMPTVTW
Sbjct: 56  EMPTVTW 62


>ref|XP_010312820.1| PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Solanum lycopersicum]
          Length = 498

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSP---NPAKPSLNP-SKFTVL---PFSTQSSKFPEY 23
           M SI++RNQ+LK++ +N     PK     +  KP   P + + VL   PFST SSKFPEY
Sbjct: 1   MTSIIRRNQSLKTIFRN-----PKDSFFNSTLKPYRTPQAPYRVLNQKPFSTHSSKFPEY 55

Query: 22  EMPTVTW 2
           EMPTVTW
Sbjct: 56  EMPTVTW 62


>ref|XP_009772551.1| PREDICTED: uncharacterized protein LOC104222919 [Nicotiana
           sylvestris]
 ref|XP_016463922.1| PREDICTED: uncharacterized protein LOC107786920 [Nicotiana tabacum]
          Length = 502

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
 Frame = -1

Query: 181 MLSILKRNQTLKSLIKNQFHFIPKSPNPAKPSLNPSK-------------FTVLPFSTQS 41
           M S+L+RNQ+LK++++      PK P   KP+L P K                + FST S
Sbjct: 1   MTSMLRRNQSLKTILRT-----PKDPF-TKPTLKPYKNPQTSSTYFPPRVLNQISFSTHS 54

Query: 40  SKFPEYEMPTVTW 2
           SKFPEYEMPTVTW
Sbjct: 55  SKFPEYEMPTVTW 67


>ref|XP_012470653.1| PREDICTED: uncharacterized protein LOC105788341 [Gossypium
           raimondii]
 gb|KJB19238.1| hypothetical protein B456_003G090600 [Gossypium raimondii]
          Length = 504

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
 Frame = -1

Query: 175 SILKRNQTLKSLIKNQFHFIPKSP------NPAKPSLNPSK-FTVLPFSTQSSKFPEYEM 17
           S + R Q L  LIKN   F P  P      NP     NPS+ F V  +STQS+KFPEY+M
Sbjct: 4   SAVLRRQKLLKLIKNLHIFHPWCPKHKTLQNPCAQIQNPSRVFGVSQYSTQSTKFPEYQM 63

Query: 16  PTVTW 2
           P+VTW
Sbjct: 64  PSVTW 68


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