BLASTX nr result

ID: Chrysanthemum22_contig00043706 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043706
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY96531.1| hypothetical protein LSAT_5X187541 [Lactuca sativa]    118   3e-30
gb|PLY70180.1| hypothetical protein LSAT_9X4560 [Lactuca sativa]       56   9e-07

>gb|PLY96531.1| hypothetical protein LSAT_5X187541 [Lactuca sativa]
          Length = 229

 Score =  118 bits (296), Expect = 3e-30
 Identities = 64/110 (58%), Positives = 73/110 (66%)
 Frame = +3

Query: 135 IACPRRLLKDQESSKHIKNHHMSKNQSRQTPSRSSCEKIRKATFGRFRRVDISVSPKPHA 314
           + C   LL        I N  M++NQS QTPSR SC++IRKATFGRFR    S S KP  
Sbjct: 51  LTCAILLLNGHIHLTFICNTCMARNQSSQTPSRGSCDRIRKATFGRFRP---SFSSKPRV 107

Query: 315 SYTQPMALHQLILPNEIPVEYGPPPEVKSVKNVHFSSENATKHNHGTGGK 464
           S+TQPMALHQ     EIP+E+ PPPEVKSVKNVHFS +N  K  HG GGK
Sbjct: 108 SFTQPMALHQPFSGKEIPIEFVPPPEVKSVKNVHFSGKNVEK--HGNGGK 155


>gb|PLY70180.1| hypothetical protein LSAT_9X4560 [Lactuca sativa]
          Length = 178

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 46/106 (43%), Positives = 56/106 (52%), Gaps = 18/106 (16%)
 Frame = +3

Query: 198 MSKNQSRQTPSRSSCEKIRKATFGRFRRVDISVSPK----PHASYT-------QPMALHQ 344
           M+K+QS ++ +RSS EKI K TFG  RR  IS  PK    P+ S T         + LHQ
Sbjct: 1   MAKDQSSKSLARSSYEKISKVTFGSLRR--ISHCPKNTNIPNPSLTTTDAPQIPSLPLHQ 58

Query: 345 LI----LPNEIPVEYGPP--PEVKSVKN-VHFSSENATKHNHGTGG 461
            +    L N+IP E+ PP  P VK  K  V FSS N  K   G GG
Sbjct: 59  PVSGETLQNQIPCEFIPPPVPVVKPTKKFVRFSSSNIKKTRDGDGG 104


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