BLASTX nr result

ID: Chrysanthemum22_contig00043586 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043586
         (531 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA22835.1| hypothetical protein SOVF_030430 [Spinacia oleracea]    57   4e-06

>gb|KNA22835.1| hypothetical protein SOVF_030430 [Spinacia oleracea]
          Length = 560

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
 Frame = +3

Query: 72  RGCLTVEGEDGPTRLYYFLLKDAIDTSLEIEFRTKT-LGRKVRGYVLAYY---GDDFLYE 239
           R C  V GE G   ++Y +  DA+   +++ F +       + G + A Y   G D  YE
Sbjct: 404 RICSVVRGEYGFAVVHYAMFSDALQAKVKVTFSSDNGCDHLISGSISARYSGYGYDTSYE 463

Query: 240 CQCDPSVRDFYSALLFLSDHVLE---PGKIKLIKSAMAVPTKGNLIIKAYLEDAGSGEVI 410
                  + ++ ++LF  D  +E    G++ L+KSA+AVP   +L++KAY+    +G+++
Sbjct: 464 -------KKYFHSILFDDDEFVEISNGGEVPLLKSAVAVPENNSLVVKAYIRVKVAGKIV 516

Query: 411 MKN-TCGFKPQ 440
             N    FKPQ
Sbjct: 517 KLNGKATFKPQ 527


Top