BLASTX nr result

ID: Chrysanthemum22_contig00043495 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043495
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]       67   5e-10
ref|XP_023744274.1| uncharacterized protein LOC111892467 [Lactuc...    63   6e-09
ref|XP_023764543.1| uncharacterized protein LOC111913047 [Lactuc...    60   1e-07
gb|OTG08547.1| putative retrotransposon Orf1 [Helianthus annuus]       59   2e-07
ref|XP_021994062.1| uncharacterized protein LOC110890743 [Helian...    59   2e-07

>gb|PLY98440.1| hypothetical protein LSAT_1X7101 [Lactuca sativa]
          Length = 346

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   TITGRKDMTHRVTLLDPFYL*CMLAEGVHCNISFWLADYLRTASGM-RFEDGVHGGMFVT 178
           TI  RKD   +V+ LD FYL  ++  GV CNI + LA YL   +   R    ++GGMFVT
Sbjct: 129 TINQRKD-DDKVSNLDVFYLWSIITPGVFCNIPWCLASYLSEGAVKDRKTSRINGGMFVT 187

Query: 179 RLAQSFGILNGEVPTYLNVVAEPKVVKAKSLKAMDVIMDYGGGY 310
           RLA SFG++N     ++ ++  P        +A  +I DYGGG+
Sbjct: 188 RLANSFGLMNRGAWNFMTMIPTPPFNPILFRRAR-IIEDYGGGH 230


>ref|XP_023744274.1| uncharacterized protein LOC111892467 [Lactuca sativa]
          Length = 263

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   TITGRKDMTHRVTLLDPFYL*CMLAEGVHCNISFWLADYLRTASGM-RFEDGVHGGMFVT 178
           TI  RKD   +V+ LD FYL  ++   V CNI + +A YL   +   R    ++GGMFVT
Sbjct: 46  TINQRKD-DDKVSNLDVFYLWSIITPDVFCNIPWCIASYLSEGAVKDRKTSRINGGMFVT 104

Query: 179 RLAQSFGILNGEVPTYLNVVAEPKVVKAKSLKAMDVIMDYGGGY 310
           RLA SFG++N     ++ ++  P        +A  +I DYGGG+
Sbjct: 105 RLANSFGLMNRGAWNFMTMIPTPPFNPILFRRAR-IIEDYGGGH 147


>ref|XP_023764543.1| uncharacterized protein LOC111913047 [Lactuca sativa]
          Length = 303

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = +2

Query: 2   TITGRKDMTHRVTLLDPFYL*CMLAEGVHCNISFWLADYLRTASGM-RFEDGVHGGMFVT 178
           TI  RKD   +V+ LD FYL  ++  GV CNI + +A YL   +   R    ++GGMFVT
Sbjct: 207 TINQRKD-DDKVSNLDVFYLWSIITPGVFCNIPWCIASYLSEGAVKDRKTSRINGGMFVT 265

Query: 179 RLAQSFGILNGEVPTYLNVVAEPKVVKAKSLKAMDVIMDYGGGYAWFR 322
           RLA SFG++N     ++ ++  P                +G G+ W R
Sbjct: 266 RLANSFGLMNRGAWNFMTLIPTP---------------PHGSGWVWQR 298


>gb|OTG08547.1| putative retrotransposon Orf1 [Helianthus annuus]
          Length = 365

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
 Frame = +2

Query: 2   TITGRKDMTHRVTLLDPFYL*CMLAEGVHCNISFWLADYLRTASGMRFEDGVHGGMFVTR 181
           +I GRK+ T  VT  D F+L C +   V CN+++ LA Y     G      + GG F+T+
Sbjct: 148 SIAGRKESTGVVTQRDLFFLYCFVKPAV-CNVAYVLASYFTCCMGKMPTSHICGGSFITQ 206

Query: 182 LAQSFGILNGEVPTYLNVVAEPKVVKAKSLKAMDVI-MDYGGGYAW-------FRTRPAV 337
           LA+S+G+L  EV   L      + +    L  M  +    GGGY         ++  P+ 
Sbjct: 207 LAESYGVLTSEVCATLTSFLPTQTIDMVVLTNMKAVGQTEGGGYVLLDGHGKIWQPDPSQ 266

Query: 338 QXXXXXXXXEQPIPAYQQGDG 400
                    EQP    QQ +G
Sbjct: 267 HPVKQEDAPEQPQVEPQQHEG 287


>ref|XP_021994062.1| uncharacterized protein LOC110890743 [Helianthus annuus]
          Length = 432

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
 Frame = +2

Query: 2   TITGRKDMTHRVTLLDPFYL*CMLAEGVHCNISFWLADYLRTASGMRFEDGVHGGMFVTR 181
           +I GRK+ T  VT  D F+L C +   V CN+++ LA Y     G      + GG F+T+
Sbjct: 215 SIAGRKESTGVVTQRDLFFLYCFVKPAV-CNVAYVLASYFTCCMGKMPTSHICGGSFITQ 273

Query: 182 LAQSFGILNGEVPTYLNVVAEPKVVKAKSLKAMDVI-MDYGGGYAW-------FRTRPAV 337
           LA+S+G+L  EV   L      + +    L  M  +    GGGY         ++  P+ 
Sbjct: 274 LAESYGVLTSEVCATLTSFLPTQTIDMVVLTNMKAVGQTEGGGYVLLDGHGKIWQPDPSQ 333

Query: 338 QXXXXXXXXEQPIPAYQQGDG 400
                    EQP    QQ +G
Sbjct: 334 HPVKQEDAPEQPQVEPQQHEG 354


Top