BLASTX nr result
ID: Chrysanthemum22_contig00043236
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00043236
(381 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 210 1e-60
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 209 3e-60
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 206 4e-59
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 206 4e-59
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group] 195 6e-59
emb|CAH66031.1| H0515C11.7 [Oryza sativa] 192 8e-59
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 205 1e-58
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 204 2e-58
gb|ASR75372.1| retrotransposon protein [Oryza nivara] 198 3e-56
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 191 1e-55
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 195 3e-55
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 192 2e-54
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 192 4e-54
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 189 2e-53
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 189 2e-53
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 189 2e-53
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 189 3e-53
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 188 6e-53
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 186 4e-52
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 177 8e-52
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 210 bits (534), Expect = 1e-60
Identities = 102/127 (80%), Positives = 113/127 (88%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R KLYLSQK YIEKVL+RFNMH AK V TPLAAHF+LS+ LCPQSD DI YM+ VP
Sbjct: 1263 RKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVP 1322
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLSHALSVVSRYMANPGK+HWKAV+WIFRYLRGTS+ACL+FG
Sbjct: 1323 YSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGR 1382
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1383 SRDGLVG 1389
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 209 bits (532), Expect = 3e-60
Identities = 101/127 (79%), Positives = 112/127 (88%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
+ER GKLYLSQK YIEKVL+RFNMH AK V TPLAAHF+LS+ LCPQSD DI YM+ VP
Sbjct: 862 KERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVP 921
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+S VGSLMYAMVCSRPDLSHALSVVSRYMANPGK+HWKAV+WIFRYL GTS+ACL+FG
Sbjct: 922 YSSVVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGTSSACLQFGR 981
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 982 SRDGLVG 988
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 206 bits (524), Expect = 4e-59
Identities = 100/127 (78%), Positives = 110/127 (86%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
RER GKLYLSQK YIEKVL+RFNMH AK V TPLAAHF+LS+ LCPQSD DI YM+ VP
Sbjct: 935 RERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVP 994
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y S VGSLMYAMVCSR DLSHALSVVSRYMANPGK+HWK V+WIF+YLRGTS+ACL+FG
Sbjct: 995 YLSVVGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQFGR 1054
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1055 SRDGLVG 1061
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 206 bits (524), Expect = 4e-59
Identities = 100/127 (78%), Positives = 111/127 (87%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
RER GKLYLSQK YIEKVL+RFNMH AK V TPLAAHF+LS+ LCP SD DI YM+ VP
Sbjct: 1028 RERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVP 1087
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVC RPDLSHALSVV+RYMANPGK+HWKAV+WIFRYLRGTS+ACL+F
Sbjct: 1088 YSSAVGSLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTSSACLQFER 1147
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1148 SRDGLVG 1154
>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 195 bits (495), Expect = 6e-59
Identities = 90/127 (70%), Positives = 109/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+KVL+RFNMH AK V TP+ +HFKLSA C +D+D+ YM+ VP
Sbjct: 113 RDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIVSHFKLSALQCASTDEDVEYMSRVP 172
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+S VGSLMYAMVCSRPDLSHA+S+VSRYMANPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 173 YSSDVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR 232
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 233 TDKGLVG 239
>emb|CAH66031.1| H0515C11.7 [Oryza sativa]
Length = 293
Score = 192 bits (488), Expect = 8e-59
Identities = 89/127 (70%), Positives = 107/127 (84%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+KVL+RFNMH AK V T +A HFKLSA C +D+D+ YM+ VP
Sbjct: 17 RDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTSIAPHFKLSALQCASTDEDVEYMSRVP 76
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLSHA+S+VSRYM NPGK+HWKA+ WIFRYLRGT++ACLKFG
Sbjct: 77 YSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRGTTDACLKFGR 136
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 137 TDKGLVG 143
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 205 bits (521), Expect = 1e-58
Identities = 101/127 (79%), Positives = 110/127 (86%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
RER GKLYLSQK YIEKVL RFNMH AK V T LAAHF+LS+ LCPQS DI YM+ VP
Sbjct: 965 RERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVP 1024
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAV SLMYAMVCSRPDLSHALSVVSRYMANPGK+HWKAV+WIFRYLRGTS+ACL+FG
Sbjct: 1025 YSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGR 1084
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1085 SSDGLVG 1091
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 204 bits (519), Expect = 2e-58
Identities = 98/127 (77%), Positives = 110/127 (86%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
RER KLYLSQK YIEKV +RFNMH AK V TPLAAHF+LS+ LCPQSD +I YM+ VP
Sbjct: 905 RERHSDKLYLSQKGYIEKVFRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYNIEYMSRVP 964
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAM+CSRPDLSHALSVVSRYMANPGK+HWK V+WIFRYL GTS+ACL+FG
Sbjct: 965 YSSAVGSLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGTSSACLQFGR 1024
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1025 SRDGLVG 1031
>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
Length = 1170
Score = 198 bits (503), Expect = 3e-56
Identities = 92/127 (72%), Positives = 110/127 (86%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+KVL+RFNMH AK V TP+A HFKLSA C +D+D+ YM+ VP
Sbjct: 966 RDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVP 1025
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLSHA+S+VSRYMANPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 1026 YSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR 1085
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1086 TDKGLVG 1092
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 191 bits (485), Expect = 1e-55
Identities = 87/127 (68%), Positives = 107/127 (84%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+ G L+LSQ+ YI+KVL+ FNMH AK + TP+AAHFKLSA C +D+D+ YM+ VP
Sbjct: 379 RDINFGLLFLSQQSYIKKVLEHFNMHDAKPISTPIAAHFKLSALQCASTDEDVGYMSRVP 438
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAM+CSRPDLSHA+S+VSRYMANPGK+HWKAV+W FRYLRGT++AC KFG
Sbjct: 439 YSSAVGSLMYAMICSRPDLSHAMSLVSRYMANPGKEHWKAVQWFFRYLRGTTDACSKFGR 498
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 499 TDKGLVG 505
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 195 bits (495), Expect = 3e-55
Identities = 91/127 (71%), Positives = 109/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+KVL+RFNMH AK V TP+A HFKLSA C +D+D+ YM+ VP
Sbjct: 1046 RDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVP 1105
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCS PDLSHA+S+VSRYMANPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 1106 YSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR 1165
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1166 IDKGLVG 1172
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAL75759.1| Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAP51772.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1005
Score = 192 bits (488), Expect = 2e-54
Identities = 89/127 (70%), Positives = 107/127 (84%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+ VL+RFNMH AK V P+A HFKLS C +D+D+ YM+ VP
Sbjct: 729 RDRNSGLLFLSQQSYIKNVLQRFNMHDAKLVSIPIAPHFKLSVLQCASTDEDVEYMSRVP 788
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLSHA+S+VSRYMANPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 789 YSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR 848
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 849 TDKGLVG 855
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 192 bits (487), Expect = 4e-54
Identities = 88/127 (69%), Positives = 108/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R++ G L+LSQ+ YI+KVL+ FNMH AK V TP+A HFKLSA C +D+D+ YM+ VP
Sbjct: 1046 RDKNSGLLFLSQQSYIKKVLQCFNMHDAKPVSTPIAPHFKLSALQCANTDEDVEYMSRVP 1105
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLSHA+S+VSRYM NPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 1106 YSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAVQWIFRYLRGTADACLKFGR 1165
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1166 TDKGLIG 1172
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 189 bits (481), Expect = 2e-53
Identities = 88/127 (69%), Positives = 108/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R+ G L+LSQ YI+KVL+RFNM AK V TP+A HFKLSAA CP D +I YM+ VP
Sbjct: 1057 RDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVP 1116
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLS+A+S+VSRYM+NPGK+HW+AV+WIFRYLRGT+ +CLKFG
Sbjct: 1117 YSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGR 1176
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1177 TDKGLIG 1183
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 189 bits (481), Expect = 2e-53
Identities = 87/127 (68%), Positives = 109/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R+ G L+LSQ YI+KVL+RFNM AK V TP+A HFKLSAA CP +D +I YM+ VP
Sbjct: 1059 RDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVP 1118
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLS+A+S+VSRYM+NPGK+HW+A++WIFRYLRGT+ +CLKFG
Sbjct: 1119 YSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGR 1178
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1179 TDKGLIG 1185
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 189 bits (481), Expect = 2e-53
Identities = 88/127 (69%), Positives = 108/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R+ G L+LSQ YI+KVL+RFNM AK V TP+A HFKLSAA CP D +I YM+ VP
Sbjct: 1057 RDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVP 1116
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLS+A+S+VSRYM+NPGK+HW+AV+WIFRYLRGT+ +CLKFG
Sbjct: 1117 YSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGR 1176
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1177 TDKGLIG 1183
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 189 bits (480), Expect = 3e-53
Identities = 87/127 (68%), Positives = 108/127 (85%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R+ G L+LSQ YI+KVL+RFNM AK V TP+A HFKLSAA CP +D +I YM+ VP
Sbjct: 1057 RDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVP 1116
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+SAVGSLMYAMVCSRPDLS+A+S+VSRYM+NPGK+HW+ V+WIFRYLRGT+ +CLKFG
Sbjct: 1117 YSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFGR 1176
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1177 TDKGLIG 1183
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group]
gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1229
Score = 188 bits (478), Expect = 6e-53
Identities = 88/127 (69%), Positives = 107/127 (84%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+ G L+LSQ+ YI+KVL+RFN+H AK V TP+A HFKLSA C +D+D+ YM+ VP
Sbjct: 992 RDINSGLLFLSQQSYIKKVLQRFNIHDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVP 1051
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+S VGSLMYAMVCSRP LSHA+S+VSRYMANPGK+HWKAV+WIFRYLRGT++ACLKFG
Sbjct: 1052 YSSVVGSLMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGR 1111
Query: 21 CGEGLVG 1
+GLVG
Sbjct: 1112 TDKGLVG 1118
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 186 bits (472), Expect = 4e-52
Identities = 86/127 (67%), Positives = 105/127 (82%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+R G L+LSQ+ YI+KVL+RFNMH K V T +A HFKLSA C +D+D+ YM+ VP
Sbjct: 899 RDRNSGWLFLSQQSYIKKVLQRFNMHDTKPVSTHIAPHFKLSALQCASTDEDVEYMSRVP 958
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKFGS 22
Y+S VGSLMYAMVCSR DLSHA+S+VSRYMANPGK+HWKA++WIFRYLR T+NACLKFG
Sbjct: 959 YSSVVGSLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRDTANACLKFGR 1018
Query: 21 CGEGLVG 1
+GL+G
Sbjct: 1019 TNKGLIG 1025
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 177 bits (449), Expect = 8e-52
Identities = 82/118 (69%), Positives = 103/118 (87%)
Frame = -1
Query: 381 RERQLGKLYLSQKRYIEKVLKRFNMHKAKRVRTPLAAHFKLSAALCPQSDDDINYMTYVP 202
R+RQ+GKL+LSQ++YIE++L RFNM+ K V TPLAAHFKLS+ LCPQ+ +++ M++VP
Sbjct: 114 RDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVP 173
Query: 201 YASAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKKHWKAVKWIFRYLRGTSNACLKF 28
YASAVGSLMYAMVC+RPDL++A+S+VSRYM NPGK HW AVKWIFRYL+GTSN L F
Sbjct: 174 YASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVF 231