BLASTX nr result

ID: Chrysanthemum22_contig00043136 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043136
         (393 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023759828.1| FBD-associated F-box protein At4g10400-like ...    63   6e-09
ref|XP_023759986.1| FBD-associated F-box protein At4g10400-like ...    62   1e-08
ref|XP_023759927.1| F-box protein At4g09920-like isoform X2 [Lac...    62   1e-08
gb|PLY99809.1| hypothetical protein LSAT_0X21100 [Lactuca sativa]      62   1e-08
ref|XP_022024802.1| FBD-associated F-box protein At4g10400-like ...    61   3e-08
ref|XP_023766241.1| F-box/FBD/LRR-repeat protein At4g26340-like ...    56   1e-06
ref|XP_023766238.1| F-box/FBD/LRR-repeat protein At4g26340-like ...    56   1e-06
gb|OTF87703.1| putative FBD domain, Leucine-rich repeat domain, ...    54   9e-06

>ref|XP_023759828.1| FBD-associated F-box protein At4g10400-like isoform X1 [Lactuca
           sativa]
 ref|XP_023759878.1| FBD-associated F-box protein At4g10400-like isoform X1 [Lactuca
           sativa]
          Length = 428

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLG-MFDTKFLKFILENAVDLKKLIV 216
           EHLCI +  E  W  P+P PT  L+ + T+++    G  +D +FL++IL N+  LK L +
Sbjct: 327 EHLCIDEPEESCWIEPQPIPTCMLSKLTTLKFKKCKGRKWDLQFLEYILGNSEVLKTLTI 386

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIH 120
             +  L   K+   L A L  F RASR C+IH
Sbjct: 387 ITSVSLTPKKEM-WLCAQLLKFPRASRSCEIH 417


>ref|XP_023759986.1| FBD-associated F-box protein At4g10400-like isoform X3 [Lactuca
           sativa]
          Length = 425

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLG-MFDTKFLKFILENAVDLKKLIV 216
           EHLCI +  E  W  P+  PT  L+N+ T+ +    G  +D +FL+++L N+  LK L +
Sbjct: 327 EHLCIDEPEEFCWIEPQQIPTCMLSNLTTLNFKRCNGRKWDLQFLEYMLGNSEVLKTLTI 386

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIHL---ASYN 105
              S+ +S K+   L A L  F RASR C+IH    ++YN
Sbjct: 387 -ITSETLSPKKEMWLCAQLLKFPRASRSCEIHFVGNSAYN 425


>ref|XP_023759927.1| F-box protein At4g09920-like isoform X2 [Lactuca sativa]
          Length = 427

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLG-MFDTKFLKFILENAVDLKKLIV 216
           EHLCI +  E  W  P+  PT  L+N+ T+ +    G  +D +FL+++L N+  LK L +
Sbjct: 329 EHLCIDEPEEFCWIEPQQIPTCMLSNLTTLNFKRCNGRKWDLQFLEYMLGNSEVLKTLTI 388

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIHL---ASYN 105
              S+ +S K+   L A L  F RASR C+IH    ++YN
Sbjct: 389 -ITSETLSPKKEMWLCAQLLKFPRASRSCEIHFVGNSAYN 427


>gb|PLY99809.1| hypothetical protein LSAT_0X21100 [Lactuca sativa]
          Length = 774

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLG-MFDTKFLKFILENAVDLKKLIV 216
           EHLCI +  E  W  P+  PT  L+N+ T+ +    G  +D +FL+++L N+  LK L +
Sbjct: 676 EHLCIDEPEEFCWIEPQQIPTCMLSNLTTLNFKRCNGRKWDLQFLEYMLGNSEVLKTLTI 735

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIHL---ASYN 105
              S+ +S K+   L A L  F RASR C+IH    ++YN
Sbjct: 736 -ITSETLSPKKEMWLCAQLLKFPRASRSCEIHFVGNSAYN 774


>ref|XP_022024802.1| FBD-associated F-box protein At4g10400-like [Helianthus annuus]
          Length = 409

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
 Frame = -2

Query: 386 LCI----KKEREGWWSTPEPFPTLTLTNIVTVEYTDTLGM-FDTKFLKFILENAVDLKKL 222
           LCI    KK  EG W  P+  PT  LTN+ T+++++  G   + +FL+++L NA+ LK  
Sbjct: 305 LCIDAVSKKHEEGCWIKPKLVPTCMLTNLTTIKFSNCNGQKSEVEFLEYMLGNAMVLKTA 364

Query: 221 IVRYNSDLVSNKQREQLDAGLSMFSRASRHCQIHLASYN*SS 96
            +  N   +S ++ ++L A LS FSRAS  C+IH  +   SS
Sbjct: 365 TITCN--CLSIEEEKRLCAVLSWFSRASSLCKIHFQTSKLSS 404


>ref|XP_023766241.1| F-box/FBD/LRR-repeat protein At4g26340-like isoform X2 [Lactuca
           sativa]
          Length = 364

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLGM-FDTKFLKFILENAVDLKKLIV 216
           EHLC ++  +  W  PE  PT  L+++ T++ T   G   D +FL++IL N+  LK + +
Sbjct: 264 EHLCFEEPEDNGWIEPESVPTCMLSHLRTMKITKCQGRKCDIQFLEYILGNSEVLKTITI 323

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIH 120
              S  +  K   ++ A L  F RASR C+IH
Sbjct: 324 ICGS--MRMKDEMEMCARLLKFPRASRFCEIH 353


>ref|XP_023766238.1| F-box/FBD/LRR-repeat protein At4g26340-like isoform X1 [Lactuca
           sativa]
 ref|XP_023766239.1| F-box/FBD/LRR-repeat protein At4g26340-like isoform X1 [Lactuca
           sativa]
 ref|XP_023766240.1| F-box/FBD/LRR-repeat protein At4g26340-like isoform X1 [Lactuca
           sativa]
          Length = 429

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLGM-FDTKFLKFILENAVDLKKLIV 216
           EHLC ++  +  W  PE  PT  L+++ T++ T   G   D +FL++IL N+  LK + +
Sbjct: 329 EHLCFEEPEDNGWIEPESVPTCMLSHLRTMKITKCQGRKCDIQFLEYILGNSEVLKTITI 388

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQIH 120
              S  +  K   ++ A L  F RASR C+IH
Sbjct: 389 ICGS--MRMKDEMEMCARLLKFPRASRFCEIH 418


>gb|OTF87703.1| putative FBD domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 407

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -2

Query: 392 EHLCIKKEREGWWSTPEPFPTLTLTNIVTVEYTDTLG-MFDTKFLKFILENAVDLKKLIV 216
           EHLCI+K    +WS P+  P     ++ T++Y    G  +D + LK++L NA  LK + +
Sbjct: 307 EHLCIEKNPNDFWSYPKWVPACVRRSLTTLKYLKCDGRKYDMELLKYLLRNAEVLKMVTI 366

Query: 215 RYNSDLVSNKQREQLDAGLSMFSRASRHCQI 123
            + +  +  K++++L A +  F R SR C+I
Sbjct: 367 TWEN--LRIKEQKRLAAQMLNFPRTSRCCEI 395


Top