BLASTX nr result

ID: Chrysanthemum22_contig00043044 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00043044
         (1016 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY82519.1| hypothetical protein LSAT_2X107521 [Lactuca sativa]     61   4e-08
ref|XP_021976797.1| GRF1-interacting factor 1-like isoform X2 [H...    62   2e-07
ref|XP_021976796.1| GRF1-interacting factor 1-like isoform X1 [H...    62   2e-07
ref|XP_023767730.1| GRF1-interacting factor 1 isoform X1 [Lactuc...    57   5e-06
ref|XP_023767731.1| GRF1-interacting factor 1 isoform X2 [Lactuc...    57   6e-06

>gb|PLY82519.1| hypothetical protein LSAT_2X107521 [Lactuca sativa]
          Length = 110

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = -1

Query: 983 RGIKVKHISSPVLVEAKDASHFKQIVQHFTGQTP 882
           + IKVK+ISSPV+VEAKDAS FK+IVQHFTGQTP
Sbjct: 22  KSIKVKYISSPVMVEAKDASQFKEIVQHFTGQTP 55


>ref|XP_021976797.1| GRF1-interacting factor 1-like isoform X2 [Helianthus annuus]
          Length = 193

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 3/39 (7%)
 Frame = +3

Query: 264 FPDFTRKQDIELAGSTTEGR---GDGGETLYLKSADEGN 371
           FPDF+RKQDI L+G TTEGR   G+GGETLYLKS DEGN
Sbjct: 155 FPDFSRKQDIGLSGPTTEGRGGGGEGGETLYLKSGDEGN 193


>ref|XP_021976796.1| GRF1-interacting factor 1-like isoform X1 [Helianthus annuus]
 gb|OTG17892.1| putative SS18 family [Helianthus annuus]
          Length = 213

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 3/39 (7%)
 Frame = +3

Query: 264 FPDFTRKQDIELAGSTTEGR---GDGGETLYLKSADEGN 371
           FPDF+RKQDI L+G TTEGR   G+GGETLYLKS DEGN
Sbjct: 175 FPDFSRKQDIGLSGPTTEGRGGGGEGGETLYLKSGDEGN 213


>ref|XP_023767730.1| GRF1-interacting factor 1 isoform X1 [Lactuca sativa]
          Length = 206

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 6/42 (14%)
 Frame = +3

Query: 264 FPDFTRKQDIELAGSTTEGR------GDGGETLYLKSADEGN 371
           FPDF+RKQDI ++G T EGR      GDGGETLYLKS D+GN
Sbjct: 165 FPDFSRKQDIGISGPTNEGRGGGSGGGDGGETLYLKSPDKGN 206


>ref|XP_023767731.1| GRF1-interacting factor 1 isoform X2 [Lactuca sativa]
 gb|PLY82578.1| hypothetical protein LSAT_2X107500 [Lactuca sativa]
          Length = 215

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 6/42 (14%)
 Frame = +3

Query: 264 FPDFTRKQDIELAGSTTEGR------GDGGETLYLKSADEGN 371
           FPDF+RKQDI ++G T EGR      GDGGETLYLKS D+GN
Sbjct: 174 FPDFSRKQDIGISGPTNEGRGGGSGGGDGGETLYLKSPDKGN 215


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