BLASTX nr result
ID: Chrysanthemum22_contig00042942
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00042942
(611 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus] 306 6e-95
gb|OTF98671.1| putative EXS [Helianthus annuus] 267 2e-79
ref|XP_021633093.1| uncharacterized protein LOC110630086 [Maniho... 222 3e-65
gb|KYP63543.1| Retrovirus-related Pol polyprotein from transposo... 192 2e-56
gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposo... 196 3e-54
gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposo... 196 3e-54
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo... 196 3e-54
gb|KYP46384.1| Retrovirus-related Pol polyprotein from transposo... 190 3e-54
gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposo... 195 5e-54
gb|KYP46589.1| Retrovirus-related Pol polyprotein from transposo... 183 9e-54
gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis] 194 2e-53
ref|XP_010545858.1| PREDICTED: uncharacterized protein LOC104818... 190 2e-52
gb|PNX95113.1| copia-type polyprotein [Trifolium pratense] 191 2e-52
gb|KYP35109.1| Retrovirus-related Pol polyprotein from transposo... 180 2e-52
dbj|GAU19969.1| hypothetical protein TSUD_273040 [Trifolium subt... 188 2e-51
gb|PNX72737.1| retrovirus-related Pol polyprotein from transposo... 186 6e-51
gb|OMO51029.1| Integrase, catalytic core [Corchorus capsularis] 183 4e-50
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] >gi|404433798... 182 1e-49
sp|Q9ZT94.1|POLR2_ARATH RecName: Full=Retrovirus-related Pol pol... 182 1e-49
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 182 1e-49
>gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 990
Score = 306 bits (784), Expect = 6e-95
Identities = 144/196 (73%), Positives = 161/196 (82%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TGAHLMRGVNVNDVYYA N Q++S+ K+ S++SWHH G PSI+VLK LL
Sbjct: 376 DLRTGAHLMRGVNVNDVYYATSNPPHPPIQVHSSIKTPTSLLSWHHIFGHPSIQVLKRLL 435
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
+LG+ N S FHCDACS+NKSHK+PFGENSF SKPLELVY+DVWG VQ SNDGY+
Sbjct: 436 NKLGLVYNNTSASSFHCDACSLNKSHKLPFGENSFIASKPLELVYTDVWGPVQTSNDGYS 495
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YYVL VDFYSKY WLYP+K+KSDVSILFPQFKTLVE FF TPLVS+FSDNGGEYIGL Y
Sbjct: 496 YYVLFVDFYSKYNWLYPIKKKSDVSILFPQFKTLVENFFRTPLVSIFSDNGGEYIGLASY 555
Query: 49 LQQNGISHFTTPPHTP 2
Q+NGISHFTTPPHTP
Sbjct: 556 FQRNGISHFTTPPHTP 571
>gb|OTF98671.1| putative EXS [Helianthus annuus]
Length = 1296
Score = 267 bits (683), Expect = 2e-79
Identities = 121/200 (60%), Positives = 158/200 (79%)
Frame = -2
Query: 601 C*AMDLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVL 422
C DL TGA LMRGVN+NDVYY I+ PQ+N+T T S++ WHH LG PS++V
Sbjct: 147 CGTPDLRTGARLMRGVNINDVYYGPIS---LSPQVNNT--QTNSLLMWHHILGHPSLQVF 201
Query: 421 KFLLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISN 242
K L+ +LG+ NK++ + FHC +CS+NKSHK+PFG+NSF ++PL+L+YSDVWG V+
Sbjct: 202 KSLISRLGLQSNKVTHESFHCASCSLNKSHKLPFGKNSFVANQPLQLLYSDVWGPVKTLI 261
Query: 241 DGYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIG 62
DG+ YYVL VD++SKY WLYP+K+KSDV ILFPQFK+LVE+FF T +V+LF++NGGEY+G
Sbjct: 262 DGFKYYVLFVDYFSKYIWLYPIKQKSDVKILFPQFKSLVEKFFKTNIVALFTNNGGEYVG 321
Query: 61 LTPYLQQNGISHFTTPPHTP 2
L+PYL GISH+TTPPHTP
Sbjct: 322 LSPYLASQGISHYTTPPHTP 341
>ref|XP_021633093.1| uncharacterized protein LOC110630086 [Manihot esculenta]
Length = 690
Score = 222 bits (566), Expect = 3e-65
Identities = 106/199 (53%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAA---INSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLK 419
DL+TGA L+R N++D+Y A+ +NS R PQ+N TT+ + WHHKLG P+ KV
Sbjct: 317 DLYTGASLLRRENIDDIYCASFSRVNSQR--PQLNVTTRCLSLLSEWHHKLGHPNNKVFL 374
Query: 418 FLLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISND 239
+L+ +G+ FHC + S+NKSHK+PF ENS +KPL+LVYSD+WG Q S D
Sbjct: 375 LVLRNIGLQSMSNYVSSFHCTSYSMNKSHKLPFSENSLVSNKPLQLVYSDIWGPTQKSID 434
Query: 238 GYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGL 59
GY YYV +D YSKY WLYPMK+KSD LF F+ LVE +FHT +VS+F+DNGGEY L
Sbjct: 435 GYEYYVTFIDHYSKYVWLYPMKKKSDTHDLFIHFQKLVENYFHTKIVSVFTDNGGEYQKL 494
Query: 58 TPYLQQNGISHFTTPPHTP 2
+ GISH+TTPPHTP
Sbjct: 495 KHHFLSCGISHYTTPPHTP 513
>gb|KYP63543.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 373
Score = 192 bits (487), Expect = 2e-56
Identities = 85/159 (53%), Positives = 114/159 (71%)
Frame = -2
Query: 478 TESIISWHHKLGRPSIKVLKFLLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKV 299
TES SWHH+LG PS + F+ ++ + NK C++C I+KSHK+PF E++ K
Sbjct: 12 TESYASWHHRLGHPSSSIFTFIQQRFSLGSNKFQQS--DCNSCQISKSHKLPFHESTLKS 69
Query: 298 SKPLELVYSDVWGAVQISNDGYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVER 119
S PLE+++SDVW + +S DG YY + VD +++Y WLYP+KRKSDV LFP+FK+LVE
Sbjct: 70 SYPLEIIFSDVWTSPVLSIDGLRYYCMFVDHFTRYIWLYPIKRKSDVQTLFPKFKSLVEN 129
Query: 118 FFHTPLVSLFSDNGGEYIGLTPYLQQNGISHFTTPPHTP 2
FFH + L++DNGGEYIGL P+L +GISH TTPPHTP
Sbjct: 130 FFHHNIKILYTDNGGEYIGLRPFLSTHGISHHTTPPHTP 168
>gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1235
Score = 196 bits (498), Expect = 3e-54
Identities = 95/196 (48%), Positives = 128/196 (65%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TG +G V+ +Y S P ++ T TES SWHH+LG PS + KF+
Sbjct: 330 DLQTGHTTHKGSCVDGLYLWPATS----PSVH--TVRTESSASWHHRLGHPSSSIFKFVQ 383
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
K + NK C++C I+KSHK+PF E++ K PLE+++SDVW + +S DG
Sbjct: 384 KHFSLGSNKFPQS--DCNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLR 441
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YY + VD +++Y WLYPMKRKSDV +FP+FK+LVE F+H + L++DNGGEYIGL P+
Sbjct: 442 YYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPF 501
Query: 49 LQQNGISHFTTPPHTP 2
L +GISH TTPPHTP
Sbjct: 502 LLNHGISHHTTPPHTP 517
>gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1237
Score = 196 bits (498), Expect = 3e-54
Identities = 95/196 (48%), Positives = 128/196 (65%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TG +G V+ +Y S P ++ T TES SWHH+LG PS + KF+
Sbjct: 332 DLQTGHTTHKGSCVDGLYLWPATS----PSVH--TVRTESSASWHHRLGHPSSSIFKFVQ 385
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
K + NK C++C I+KSHK+PF E++ K PLE+++SDVW + +S DG
Sbjct: 386 KHFSLGSNKFPQS--DCNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLR 443
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YY + VD +++Y WLYPMKRKSDV +FP+FK+LVE F+H + L++DNGGEYIGL P+
Sbjct: 444 YYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPF 503
Query: 49 LQQNGISHFTTPPHTP 2
L +GISH TTPPHTP
Sbjct: 504 LLNHGISHHTTPPHTP 519
>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Glycine soja]
Length = 1294
Score = 196 bits (498), Expect = 3e-54
Identities = 95/196 (48%), Positives = 128/196 (65%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TG +G V+ +Y S P ++ T TES SWHH+LG PS + KF+
Sbjct: 343 DLQTGHTTHKGSCVDGLYLWPATS----PSVH--TVRTESSASWHHRLGHPSSSIFKFVQ 396
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
K + NK C++C I+KSHK+PF E++ K PLE+++SDVW + +S DG
Sbjct: 397 KHFSLGSNKFPQS--DCNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLR 454
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YY + VD +++Y WLYPMKRKSDV +FP+FK+LVE F+H + L++DNGGEYIGL P+
Sbjct: 455 YYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPF 514
Query: 49 LQQNGISHFTTPPHTP 2
L +GISH TTPPHTP
Sbjct: 515 LLNHGISHHTTPPHTP 530
>gb|KYP46384.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 530
Score = 190 bits (482), Expect = 3e-54
Identities = 98/205 (47%), Positives = 131/205 (63%), Gaps = 10/205 (4%)
Frame = -2
Query: 586 LHTGAHLMRGVNVNDVYYAAINSLRCL---------PQINSTTKSTESIISWHHKLGRPS 434
LHT +H ++ + V A N L + P N +T S+ S WHH LG PS
Sbjct: 316 LHTTSHPLQLKTILHVPTIAQNLLDSIIVDYITYHPPSSNQSTSSSHS--PWHHILGHPS 373
Query: 433 IKVLKFLLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAV 254
++ L+ I + C +CSI+KSHK+PF +S KPL+LVY+DVWG
Sbjct: 374 ERIFNHLISLHKIKAQSTAP----CVSCSISKSHKLPFSSSSLHSKKPLDLVYTDVWGPT 429
Query: 253 QI-SNDGYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNG 77
+ S DG+ YY++ VD +SKY WL+P+K KSDVSI+FPQFK LVE++F+TPLVS++SDNG
Sbjct: 430 PVRSLDGFLYYLIFVDHFSKYVWLFPLKNKSDVSIIFPQFKNLVEKYFNTPLVSIYSDNG 489
Query: 76 GEYIGLTPYLQQNGISHFTTPPHTP 2
GE++ L YL Q+GISHFTTP HTP
Sbjct: 490 GEFLKLKHYLSQHGISHFTTPRHTP 514
>gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1248
Score = 195 bits (496), Expect = 5e-54
Identities = 95/196 (48%), Positives = 128/196 (65%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TG +G V+ +Y S P ++ T TES SWHH+LG PS + KF+
Sbjct: 332 DLQTGHTTHKGSCVDGLYLWPATS----PSVH--TVRTESSASWHHRLGHPSSSIFKFVQ 385
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
K + NK C++C I+KSHK+PF E++ K PLE+++SDVW + +S DG
Sbjct: 386 KHFSLGSNKFLQS--GCNSCQISKSHKLPFHESTLKSCYPLEIIFSDVWTSPILSIDGLR 443
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YY + VD +++Y WLYPMKRKSDV +FP+FK+LVE F+H + L++DNGGEYIGL P+
Sbjct: 444 YYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENFYHHKIKILYTDNGGEYIGLRPF 503
Query: 49 LQQNGISHFTTPPHTP 2
L +GISH TTPPHTP
Sbjct: 504 LLNHGISHHTTPPHTP 519
>gb|KYP46589.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 308
Score = 183 bits (464), Expect = 9e-54
Identities = 92/189 (48%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
Frame = -2
Query: 568 LMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLLKQLGISP 389
L++G++ Y+ + ++ P S+T S+ S WHH LG PS + L+ I
Sbjct: 96 LLKGLHNCGQYHIPSSIIK--PIALSSTSSSHS--PWHHILGHPSEHIFNHLISLHKIKA 151
Query: 388 NKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQI-SNDGYTYYVLLV 212
+ C +CSI+KSHK+ F +S KPL+LVY+DVWG + S DG+ YY++ V
Sbjct: 152 QPTAP----CVSCSISKSHKLSFSSSSLHSKKPLDLVYTDVWGPAPVRSLDGFLYYLIFV 207
Query: 211 DFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPYLQQNGI 32
D +SKY WL+P+K KSDVSI+FPQFK LVE++F+TPLVS++SDNGGE++ L YL Q+GI
Sbjct: 208 DHFSKYVWLFPLKNKSDVSIIFPQFKNLVEKYFNTPLVSIYSDNGGEFLKLKHYLSQHGI 267
Query: 31 SHFTTPPHT 5
SHFTTPPHT
Sbjct: 268 SHFTTPPHT 276
>gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1192
Score = 194 bits (492), Expect = 2e-53
Identities = 95/198 (47%), Positives = 132/198 (66%), Gaps = 2/198 (1%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVY-YAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFL 413
DL TGA L++G N ND+Y SL + + SI WH +LG PS ++L F+
Sbjct: 410 DLSTGAPLVKGHNKNDLYELPKTTSLATAKKTFAFITQKSSIDVWHRRLGHPSSRILNFM 469
Query: 412 LKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQI-SNDG 236
L G+S + +S + C++C NKSH++PF ++S S+PLEL+YSDVWG +I S DG
Sbjct: 470 LNSFGLSFD-VSNKITDCNSCLCNKSHQLPFNDSSLSSSRPLELLYSDVWGPTRIQSTDG 528
Query: 235 YTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLT 56
Y +YV+ VD YSK+TWL+P+K KSDVS +FP FK VE+ F+T +++++SDNGGEY L+
Sbjct: 529 YRFYVIFVDHYSKFTWLFPLKYKSDVSRIFPAFKAFVEKQFNTQILTVYSDNGGEYESLS 588
Query: 55 PYLQQNGISHFTTPPHTP 2
L +GI H TPPHTP
Sbjct: 589 SLLASHGIKHLQTPPHTP 606
>ref|XP_010545858.1| PREDICTED: uncharacterized protein LOC104818098, partial [Tarenaya
hassleriana]
Length = 883
Score = 190 bits (482), Expect = 2e-52
Identities = 93/196 (47%), Positives = 132/196 (67%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
D TGA L +G N VY S L +++ + ++ +WH +LG PS+++L +L
Sbjct: 331 DRTTGAILAQGTLHNGVYEWPTLSSPSLSSVSAFSSVKSTVCAWHSRLGHPSVEILHKVL 390
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
+L + + S+ FHC+ CSINKS+K+ F +S S+PLE+V+SDVW + S +GY
Sbjct: 391 CRLSLPSSSSSSLSFHCEFCSINKSYKLSFFSSSVMSSRPLEVVFSDVWMSPIESFNGYR 450
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YYV+ VD +++YTWLYP+KRKS VS +F +FK+LVE F + L+SL+SDN GEY+ L Y
Sbjct: 451 YYVVFVDHFTRYTWLYPLKRKSHVSDIFVRFKSLVETRFQSKLMSLYSDNDGEYVALKNY 510
Query: 49 LQQNGISHFTTPPHTP 2
L NGISH+TTPPHTP
Sbjct: 511 LSVNGISHYTTPPHTP 526
>gb|PNX95113.1| copia-type polyprotein [Trifolium pratense]
Length = 1376
Score = 191 bits (484), Expect = 2e-52
Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DLHT L+RG+N ++VY + L+ PQ S ++ ++ WH +LG PS+ L L
Sbjct: 395 DLHTRETLLRGLNEDNVY--KLTPLQPQPQ-TSLAQTAPTLPLWHQRLGHPSLTTLLHAL 451
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWG-AVQISNDGY 233
K IS S C C NKSHK+PF ++S S PLE+VYSDVWG A+ S DG+
Sbjct: 452 KTNNISFTGSSNK---CIDCLSNKSHKLPFSKSSITSSYPLEIVYSDVWGPALVYSIDGF 508
Query: 232 TYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTP 53
YYV+ +D +SKY WLYPMK KSDV++LFP FK LVE+ F+T + +L+SDNGGE+I L
Sbjct: 509 RYYVIFLDHFSKYVWLYPMKLKSDVALLFPIFKKLVEKQFNTKIKTLYSDNGGEFIKLRT 568
Query: 52 YLQQNGISHFTTPPHTP 2
YLQ +GISH TTPPHTP
Sbjct: 569 YLQNHGISHLTTPPHTP 585
>gb|KYP35109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 321
Score = 180 bits (456), Expect = 2e-52
Identities = 89/195 (45%), Positives = 123/195 (63%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
+L G G V+ +Y NS P ++S TES SWHH+LG PS + F+
Sbjct: 126 NLQMGQTTHIGSCVDGLYLWPANS----PFVHSVR--TESSASWHHRLGHPSSSIFTFIQ 179
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGYT 230
+ + NK C++C I+KSHK+PF E++ K S PLE+++SDVW + +S DG
Sbjct: 180 QHFSLGSNKFQQS--DCNSCQISKSHKLPFHESTLKSSYPLEIIFSDVWTSPVLSIDGLR 237
Query: 229 YYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTPY 50
YY + VD +++Y WLYP++RKSDV LFP+FK+LVE FFH + ++DNGGEYIGL +
Sbjct: 238 YYCMFVDHFTRYIWLYPIRRKSDVQTLFPKFKSLVENFFHHNIKIFYTDNGGEYIGLRLF 297
Query: 49 LQQNGISHFTTPPHT 5
L +GISH T PPHT
Sbjct: 298 LSTHGISHHTIPPHT 312
>dbj|GAU19969.1| hypothetical protein TSUD_273040 [Trifolium subterraneum]
Length = 1314
Score = 188 bits (477), Expect = 2e-51
Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 3/199 (1%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTT--KSTESIISWHHKLGRPSIKVLKF 416
DL++G L++G D+Y + P N TT S S +WHHKLG PS ++K
Sbjct: 404 DLNSGQALLQGPIKQDLYQLPC---QITPHTNPTTFNASLHSTSTWHHKLGDPSAAIMKH 460
Query: 415 LLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQI-SND 239
L + P K+ + C +C KSHK+PF + F+ ++PLEL+YSDVWG I S D
Sbjct: 461 LTTNHQL-PIKLPSS-HECSSCYCAKSHKLPFSNHHFRSTRPLELIYSDVWGPTPIRSLD 518
Query: 238 GYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGL 59
GY YYV+ +D +SKY WLYPMK KSDVS +F QFKT+VE+ F+ P+++ FSDNGGE++ L
Sbjct: 519 GYLYYVIFIDHFSKYVWLYPMKNKSDVSNIFTQFKTIVEKHFNLPILTFFSDNGGEFVKL 578
Query: 58 TPYLQQNGISHFTTPPHTP 2
+ +GISH TTPPHTP
Sbjct: 579 KQFFATHGISHLTTPPHTP 597
>gb|PNX72737.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 950
Score = 186 bits (472), Expect = 6e-51
Identities = 97/197 (49%), Positives = 128/197 (64%), Gaps = 1/197 (0%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTKSTESIISWHHKLGRPSIKVLKFLL 410
DL TG L+RG+N ++VY + L+ S K+ ++ WH +LG P+ L L
Sbjct: 154 DLCTGEILLRGLNEDNVYKLTPSQLQ---PHTSLAKTANTLQLWHQRLGHPASSSLLHAL 210
Query: 409 KQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQI-SNDGY 233
K I+ + S C C NKSHK+PF ++S S PLE+VYSDVWG + S DG+
Sbjct: 211 KTNKITFTESSNK---CIDCLSNKSHKLPFSKSSITSSYPLEIVYSDVWGPAPVYSIDGF 267
Query: 232 TYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTP 53
YYV+ VD +SKY WLYP+K KSDVS++FP FK LVE+ F+T + ++FSDNGGE+I L
Sbjct: 268 RYYVIFVDHFSKYVWLYPIKLKSDVSLIFPTFKNLVEKQFNTKIKTVFSDNGGEFIKLRA 327
Query: 52 YLQQNGISHFTTPPHTP 2
YLQ +GISH TTPPHTP
Sbjct: 328 YLQNHGISHLTTPPHTP 344
>gb|OMO51029.1| Integrase, catalytic core [Corchorus capsularis]
Length = 813
Score = 183 bits (464), Expect = 4e-50
Identities = 94/200 (47%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
Frame = -2
Query: 586 LHTGAHLMRGVNVNDVYYAAINSLRCLPQINSTTK-----STESIISWHHKLGRPSIKVL 422
+HT L RG+ +N VY LP ST+ S I WHH+ G PS VL
Sbjct: 404 VHTRQELTRGLLINGVYK--------LPATVSTSPQAFVFSRVLISYWHHRFGHPSKPVL 455
Query: 421 KFLLKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISN 242
+L QLGIS + +D+ C+AC +KSHK+PF ++ KPLEL+YSD+WG + S
Sbjct: 456 VSMLSQLGISTSCNKSDV--CNACQCSKSHKLPFALSTLSTVKPLELIYSDIWGP-KPSV 512
Query: 241 DGYTYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIG 62
G+ YYV+ VD ++KYTW Y +K+K D+S++FP+FK LVE++F++P+VS +SD GGEY
Sbjct: 513 SGHYYYVIFVDHFTKYTWFYSLKKKFDLSLIFPKFKLLVEKYFNSPIVSFYSDGGGEYEK 572
Query: 61 LTPYLQQNGISHFTTPPHTP 2
L +LQ +GISH TPPHTP
Sbjct: 573 LKQFLQLHGISHLKTPPHTP 592
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana]
dbj|BAM44533.1| polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 182 bits (463), Expect = 1e-49
Identities = 91/197 (46%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINST-TKSTESIISWHHKLGRPSIKVLKFL 413
DL+TG L++G +++Y I S + + S +K+T S SWH +LG PS+ +L +
Sbjct: 278 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHS--SWHSRLGHPSLAILNSV 335
Query: 412 LKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGY 233
+ + S L C C INKSHK+PF ++ SKPLE +YSDVW + +S D Y
Sbjct: 336 ISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNY 395
Query: 232 TYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTP 53
YYV+ VD +++YTWLYP+K+KS V F FK+LVE F T + +L+SDNGGE++ L
Sbjct: 396 RYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRD 455
Query: 52 YLQQNGISHFTTPPHTP 2
YL Q+GISHFT+PPHTP
Sbjct: 456 YLSQHGISHFTSPPHTP 472
>sp|Q9ZT94.1|POLR2_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon
RE2; AltName: Full=Retro element 2; Short=AtRE2;
Includes: RecName: Full=Protease RE2; Includes: RecName:
Full=Reverse transcriptase RE2; Includes: RecName:
Full=Endonuclease RE2
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
emb|CAB77781.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
Length = 1456
Score = 182 bits (463), Expect = 1e-49
Identities = 91/197 (46%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINST-TKSTESIISWHHKLGRPSIKVLKFL 413
DL+TG L++G +++Y I S + + S +K+T S SWH +LG PS+ +L +
Sbjct: 404 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHS--SWHSRLGHPSLAILNSV 461
Query: 412 LKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGY 233
+ + S L C C INKSHK+PF ++ SKPLE +YSDVW + +S D Y
Sbjct: 462 ISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNY 521
Query: 232 TYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTP 53
YYV+ VD +++YTWLYP+K+KS V F FK+LVE F T + +L+SDNGGE++ L
Sbjct: 522 RYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRD 581
Query: 52 YLQQNGISHFTTPPHTP 2
YL Q+GISHFT+PPHTP
Sbjct: 582 YLSQHGISHFTSPPHTP 598
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 182 bits (463), Expect = 1e-49
Identities = 91/197 (46%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Frame = -2
Query: 589 DLHTGAHLMRGVNVNDVYYAAINSLRCLPQINST-TKSTESIISWHHKLGRPSIKVLKFL 413
DL+TG L++G +++Y I S + + S +K+T S SWH +LG PS+ +L +
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHS--SWHSRLGHPSLAILNSV 480
Query: 412 LKQLGISPNKMSTDLFHCDACSINKSHKMPFGENSFKVSKPLELVYSDVWGAVQISNDGY 233
+ + S L C C INKSHK+PF ++ SKPLE +YSDVW + +S D Y
Sbjct: 481 ISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNY 540
Query: 232 TYYVLLVDFYSKYTWLYPMKRKSDVSILFPQFKTLVERFFHTPLVSLFSDNGGEYIGLTP 53
YYV+ VD +++YTWLYP+K+KS V F FK+LVE F T + +L+SDNGGE++ L
Sbjct: 541 RYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRD 600
Query: 52 YLQQNGISHFTTPPHTP 2
YL Q+GISHFT+PPHTP
Sbjct: 601 YLSQHGISHFTSPPHTP 617