BLASTX nr result

ID: Chrysanthemum22_contig00042687 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00042687
         (516 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH90072.1| Sec1-like protein [Cynara cardunculus var. scolymus]    58   1e-06
ref|XP_021972503.1| SNARE-interacting protein KEULE-like [Helian...    55   9e-06

>gb|KVH90072.1| Sec1-like protein [Cynara cardunculus var. scolymus]
          Length = 672

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 50/129 (38%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
 Frame = -1

Query: 330 LNQFPNAIDP*Q-----QESRSATTLYTPTL--------IW*KKRWK*NVGD*SVVLRRT 190
           +N++P   DP         S SA  L TP+          W ++R   +      VLRRT
Sbjct: 542 VNEYPCMNDPSPTFHGASHSVSARVLDTPSAHSMRSRRATWARRRTSDDGYSSESVLRRT 601

Query: 189 ASEFRKMGTTYLFSLK*KPLW*ICKKFKYFHIF------LRVCHKLTTKLRREIILGSSS 28
            SEF++MG                K+   F I       LR CHKLTTKLRREIILGSSS
Sbjct: 602 TSEFQRMG----------------KRIFVFIIGGATRSELRACHKLTTKLRREIILGSSS 645

Query: 27  LLDPA*FVE 1
           L  PA F+E
Sbjct: 646 LDSPAQFIE 654


>ref|XP_021972503.1| SNARE-interacting protein KEULE-like [Helianthus annuus]
 gb|OTG20046.1| putative sec1-like protein [Helianthus annuus]
          Length = 661

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 37/74 (50%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
 Frame = -1

Query: 204 VLRRTASEFRKMGTTYLFSLK*KPLW*ICKKFKYFHIF------LRVCHKLTTKLRREII 43
           +LRRT SE+ KMG                K+   F +       LRVCHKLTT LRREII
Sbjct: 575 ILRRTISEYHKMG----------------KRIFVFIVGGATRSELRVCHKLTTSLRREII 618

Query: 42  LGSSSLLDPA*FVE 1
           LGSSSL +PA FVE
Sbjct: 619 LGSSSLDNPAQFVE 632


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