BLASTX nr result
ID: Chrysanthemum22_contig00042613
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00042613
(1038 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH96441.1| Pre-mRNA polyadenylation factor Fip1 [Cynara card... 293 3e-86
ref|XP_022038250.1| FIP1[V]-like protein isoform X3 [Helianthus ... 154 8e-38
ref|XP_022038249.1| FIP1[V]-like protein isoform X2 [Helianthus ... 154 8e-38
ref|XP_022038248.1| FIP1[V]-like protein isoform X1 [Helianthus ... 154 8e-38
ref|XP_023765693.1| FIP1[III]-like protein isoform X2 [Lactuca s... 122 5e-27
ref|XP_023765690.1| FIP1[III]-like protein isoform X1 [Lactuca s... 122 5e-27
>gb|KVH96441.1| Pre-mRNA polyadenylation factor Fip1 [Cynara cardunculus var.
scolymus]
Length = 1277
Score = 293 bits (749), Expect = 3e-86
Identities = 180/423 (42%), Positives = 226/423 (53%), Gaps = 78/423 (18%)
Frame = +3
Query: 3 DRPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQE---------LGGQNSKYSPDLTYK 155
D FR D+ +Y RRRYIE+D+MMAGD+ + QNSKY L YK
Sbjct: 725 DLSAFRSSDEKEYYGERRRYIEDDKMMAGDWCHHERELAVEHVNFFSSQNSKYPSYLKYK 784
Query: 156 RGAWWNWEEENLHFCNRGEEDGVFLEQESFGDIEREKNGSLTWEGRERDDVERGHVKPMA 335
RGA W + +NLHF N+ E+D FLE+E DI+ EK SLT+ RERDD ER +VK +
Sbjct: 785 RGAQWKRKGDNLHFRNKDEDDECFLEREYPDDIQGEKFRSLTYNDRERDDFERNYVKHVE 844
Query: 336 YTRWEFRGPGRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWH 515
YTRWEFRGPGR SP SELN+ SF RSSEESHIN WH
Sbjct: 845 YTRWEFRGPGRNKRMASSPSSELNHPLLKSDEDRYLRYKKGHSFTSRSSEESHINNDRWH 904
Query: 516 GNNMPRNSLYRRHGY-----------------SEPFDREDYTIDIDGHVDIGKTRPDLQS 644
GN PRN+LY HG SEPFDREDYTIDI+ VD+G++R LQS
Sbjct: 905 GNMPPRNNLYGGHGRYRVQWTGKFGYDGSLHDSEPFDREDYTIDINDRVDMGRSRHHLQS 964
Query: 645 DMSWKDGIVFRHEHKDAEFYAERA-FPYEKVSRFKRLVSEHKPDHLEGLIDNPHVVGRKY 821
+M W++ V + DA+F ERA F ++KVSR + VSEHKPD +E I +PHV KY
Sbjct: 965 EMQWEEDEVML-GNDDAKFCDERASFRFDKVSRRESFVSEHKPDQVEESIGHPHVERCKY 1023
Query: 822 KPRREGTSSDKIDRISDVTYD--------------------------------------- 884
+ REG +DK +R S+VT +
Sbjct: 1024 E-LREGAINDKFERTSNVTCEGSPIQRFQGSGDTLKFDGTSNVTHGGSHERLFVDGVDSR 1082
Query: 885 ------------YVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSCRNSFDTHLFVG 1028
+ +H + +Y +T+ V SGNK SK+ G RE+LSLSCRNS D+HL VG
Sbjct: 1083 VVDGLDIVEELIHDSHAEICRYTQTREVISGNKCSKTHGKSREQLSLSCRNSLDSHLVVG 1142
Query: 1029 KGK 1037
+GK
Sbjct: 1143 EGK 1145
>ref|XP_022038250.1| FIP1[V]-like protein isoform X3 [Helianthus annuus]
Length = 902
Score = 154 bits (389), Expect = 8e-38
Identities = 127/353 (35%), Positives = 162/353 (45%), Gaps = 8/353 (2%)
Frame = +3
Query: 3 DRPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQELGGQNSKYSPDLTYKRGAWWNWEE 182
DR + R L++++Y D RRRYIE+
Sbjct: 509 DRSISRSLEEDEYYDERRRYIED------------------------------------- 531
Query: 183 ENLHFCNRGEEDGVFLEQESFGDIEREKNGSLTWEGRERDDVERGHVKPMAYTRWEFRGP 362
RGE + +L+ + D EK S T R+R D+E YTRWEFRGP
Sbjct: 532 -------RGEMEESYLDPGHYNDTHIEKLRSFTNSDRKRYDIE--------YTRWEFRGP 576
Query: 363 GRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWHGNNMPRNSL 542
GR V SEL+N +SF RSSEESHI W GN MP+ S+
Sbjct: 577 GRNKRTVCGVYSELDNPLLKRDNE--------RSFASRSSEESHIKSCRWDGNMMPKRSV 628
Query: 543 YRRH-----GYSEPFDREDYTIDIDGHVDIGKTRPDLQSDMSWKDGIVFRHEHKDAEFYA 707
YRR YSEPFDREDY ID+DG V+ +D I+FRHE DA+F A
Sbjct: 629 YRRRESYRGQYSEPFDREDYMIDVDGGVEC-------------EDEIMFRHE--DAKFCA 673
Query: 708 ER-AFPYEKVSRFKRLVSEHK--PDHLEGLIDNPHVVGRKYKPRREGTSSDKIDRISDVT 878
R +F + KVSR KR VSE PDH+E LID+P+ D + ++T
Sbjct: 674 HRNSFLFGKVSRRKRFVSEPDPYPDHVEELIDDPY---------------DGSGYVKELT 718
Query: 879 YDYVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSCRNSFDTHLFVGKGK 1037
A+ Y +K+ VF +KSSK+ RERL LS RN L VG+ K
Sbjct: 719 AGQHANRCRY-FKQKNEVFGASKSSKAYRKSRERLPLSFRN---PQLVVGEVK 767
>ref|XP_022038249.1| FIP1[V]-like protein isoform X2 [Helianthus annuus]
gb|OTG25293.1| putative pre-mRNA polyadenylation factor Fip1 [Helianthus annuus]
Length = 904
Score = 154 bits (389), Expect = 8e-38
Identities = 127/353 (35%), Positives = 162/353 (45%), Gaps = 8/353 (2%)
Frame = +3
Query: 3 DRPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQELGGQNSKYSPDLTYKRGAWWNWEE 182
DR + R L++++Y D RRRYIE+
Sbjct: 511 DRSISRSLEEDEYYDERRRYIED------------------------------------- 533
Query: 183 ENLHFCNRGEEDGVFLEQESFGDIEREKNGSLTWEGRERDDVERGHVKPMAYTRWEFRGP 362
RGE + +L+ + D EK S T R+R D+E YTRWEFRGP
Sbjct: 534 -------RGEMEESYLDPGHYNDTHIEKLRSFTNSDRKRYDIE--------YTRWEFRGP 578
Query: 363 GRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWHGNNMPRNSL 542
GR V SEL+N +SF RSSEESHI W GN MP+ S+
Sbjct: 579 GRNKRTVCGVYSELDNPLLKRDNE--------RSFASRSSEESHIKSCRWDGNMMPKRSV 630
Query: 543 YRRH-----GYSEPFDREDYTIDIDGHVDIGKTRPDLQSDMSWKDGIVFRHEHKDAEFYA 707
YRR YSEPFDREDY ID+DG V+ +D I+FRHE DA+F A
Sbjct: 631 YRRRESYRGQYSEPFDREDYMIDVDGGVEC-------------EDEIMFRHE--DAKFCA 675
Query: 708 ER-AFPYEKVSRFKRLVSEHK--PDHLEGLIDNPHVVGRKYKPRREGTSSDKIDRISDVT 878
R +F + KVSR KR VSE PDH+E LID+P+ D + ++T
Sbjct: 676 HRNSFLFGKVSRRKRFVSEPDPYPDHVEELIDDPY---------------DGSGYVKELT 720
Query: 879 YDYVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSCRNSFDTHLFVGKGK 1037
A+ Y +K+ VF +KSSK+ RERL LS RN L VG+ K
Sbjct: 721 AGQHANRCRY-FKQKNEVFGASKSSKAYRKSRERLPLSFRN---PQLVVGEVK 769
>ref|XP_022038248.1| FIP1[V]-like protein isoform X1 [Helianthus annuus]
Length = 906
Score = 154 bits (389), Expect = 8e-38
Identities = 127/353 (35%), Positives = 162/353 (45%), Gaps = 8/353 (2%)
Frame = +3
Query: 3 DRPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQELGGQNSKYSPDLTYKRGAWWNWEE 182
DR + R L++++Y D RRRYIE+
Sbjct: 513 DRSISRSLEEDEYYDERRRYIED------------------------------------- 535
Query: 183 ENLHFCNRGEEDGVFLEQESFGDIEREKNGSLTWEGRERDDVERGHVKPMAYTRWEFRGP 362
RGE + +L+ + D EK S T R+R D+E YTRWEFRGP
Sbjct: 536 -------RGEMEESYLDPGHYNDTHIEKLRSFTNSDRKRYDIE--------YTRWEFRGP 580
Query: 363 GRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWHGNNMPRNSL 542
GR V SEL+N +SF RSSEESHI W GN MP+ S+
Sbjct: 581 GRNKRTVCGVYSELDNPLLKRDNE--------RSFASRSSEESHIKSCRWDGNMMPKRSV 632
Query: 543 YRRH-----GYSEPFDREDYTIDIDGHVDIGKTRPDLQSDMSWKDGIVFRHEHKDAEFYA 707
YRR YSEPFDREDY ID+DG V+ +D I+FRHE DA+F A
Sbjct: 633 YRRRESYRGQYSEPFDREDYMIDVDGGVEC-------------EDEIMFRHE--DAKFCA 677
Query: 708 ER-AFPYEKVSRFKRLVSEHK--PDHLEGLIDNPHVVGRKYKPRREGTSSDKIDRISDVT 878
R +F + KVSR KR VSE PDH+E LID+P+ D + ++T
Sbjct: 678 HRNSFLFGKVSRRKRFVSEPDPYPDHVEELIDDPY---------------DGSGYVKELT 722
Query: 879 YDYVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSCRNSFDTHLFVGKGK 1037
A+ Y +K+ VF +KSSK+ RERL LS RN L VG+ K
Sbjct: 723 AGQHANRCRY-FKQKNEVFGASKSSKAYRKSRERLPLSFRN---PQLVVGEVK 771
>ref|XP_023765693.1| FIP1[III]-like protein isoform X2 [Lactuca sativa]
ref|XP_023765694.1| FIP1[III]-like protein isoform X2 [Lactuca sativa]
Length = 852
Score = 122 bits (307), Expect = 5e-27
Identities = 118/374 (31%), Positives = 159/374 (42%), Gaps = 30/374 (8%)
Frame = +3
Query: 6 RPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQELGGQNSKYSPDLTYKRGAWWNWEEE 185
RPVFRRL++ +Y D +RRY E G+
Sbjct: 560 RPVFRRLEEEEYYDEQRRYTNEFGKRKGN------------------------------- 588
Query: 186 NLHFCNRGEEDGVFLEQESFGDIEREKNGSLTW-EGRERDDVERGHVKPMAYTRWEFRGP 362
N+HF ++G D FLE+E DI+ E S + + E+D+ E HV AYTRWEFRG
Sbjct: 589 NVHFGHKGIHDEFFLEREYSQDIKGENFRSFAYNDDMEKDEYE--HVNHEAYTRWEFRGS 646
Query: 363 GRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWHGNNMPRNSL 542
GR +VGSP SELNN + EESHIN G WH + MPR+SL
Sbjct: 647 GRNERKVGSPSSELNNPLP-------------------NREESHINNGRWHDDMMPRSSL 687
Query: 543 YR--------------RHGYSEPFDREDYTIDIDGHVDIGKTR-----PDLQSD-----M 650
Y R+ SEPF DYT+D D VD+ ++R P++Q +
Sbjct: 688 YGRQRRYEEGELSERFRYDDSEPF---DYTVDYDDRVDVVRSRDHHWQPEMQMKDDDIMI 744
Query: 651 SWKDGIVFRHEHKDAEFYAERAFPYEKVSRFKRLVSEHKPDHLEG-----LIDNPHVVGR 815
+ D + RH++K F YE S KR PD G + N H+V
Sbjct: 745 PFDDAYIKRHKYK---FERASNVKYEG-SHEKRFQGRRDPDITHGGSYEWVFMNSHMV-- 798
Query: 816 KYKPRREGTSSDKIDRISDVTYDYVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSC 995
S +D + + A YK+ + V SG K +S ++ S SC
Sbjct: 799 --------DGSVHVDDLKN------AADGCGGYKRKREVISGKKYGES----GKKPSPSC 840
Query: 996 RNSFDTHLFVGKGK 1037
RNS L V +GK
Sbjct: 841 RNSC---LVVREGK 851
>ref|XP_023765690.1| FIP1[III]-like protein isoform X1 [Lactuca sativa]
ref|XP_023765691.1| FIP1[III]-like protein isoform X1 [Lactuca sativa]
ref|XP_023765692.1| FIP1[III]-like protein isoform X1 [Lactuca sativa]
Length = 957
Score = 122 bits (307), Expect = 5e-27
Identities = 118/374 (31%), Positives = 159/374 (42%), Gaps = 30/374 (8%)
Frame = +3
Query: 6 RPVFRRLDDNKYIDVRRRYIEEDRMMAGDFFLSQELGGQNSKYSPDLTYKRGAWWNWEEE 185
RPVFRRL++ +Y D +RRY E G+
Sbjct: 560 RPVFRRLEEEEYYDEQRRYTNEFGKRKGN------------------------------- 588
Query: 186 NLHFCNRGEEDGVFLEQESFGDIEREKNGSLTW-EGRERDDVERGHVKPMAYTRWEFRGP 362
N+HF ++G D FLE+E DI+ E S + + E+D+ E HV AYTRWEFRG
Sbjct: 589 NVHFGHKGIHDEFFLEREYSQDIKGENFRSFAYNDDMEKDEYE--HVNHEAYTRWEFRGS 646
Query: 363 GRTNSRVGSPCSELNNSXXXXXXXXXXXXXXXQSFVHRSSEESHINKGGWHGNNMPRNSL 542
GR +VGSP SELNN + EESHIN G WH + MPR+SL
Sbjct: 647 GRNERKVGSPSSELNNPLP-------------------NREESHINNGRWHDDMMPRSSL 687
Query: 543 YR--------------RHGYSEPFDREDYTIDIDGHVDIGKTR-----PDLQSD-----M 650
Y R+ SEPF DYT+D D VD+ ++R P++Q +
Sbjct: 688 YGRQRRYEEGELSERFRYDDSEPF---DYTVDYDDRVDVVRSRDHHWQPEMQMKDDDIMI 744
Query: 651 SWKDGIVFRHEHKDAEFYAERAFPYEKVSRFKRLVSEHKPDHLEG-----LIDNPHVVGR 815
+ D + RH++K F YE S KR PD G + N H+V
Sbjct: 745 PFDDAYIKRHKYK---FERASNVKYEG-SHEKRFQGRRDPDITHGGSYEWVFMNSHMV-- 798
Query: 816 KYKPRREGTSSDKIDRISDVTYDYVAHPKGYKYKKTKVVFSGNKSSKSCGGIRERLSLSC 995
S +D + + A YK+ + V SG K +S ++ S SC
Sbjct: 799 --------DGSVHVDDLKN------AADGCGGYKRKREVISGKKYGES----GKKPSPSC 840
Query: 996 RNSFDTHLFVGKGK 1037
RNS L V +GK
Sbjct: 841 RNSC---LVVREGK 851