BLASTX nr result

ID: Chrysanthemum22_contig00042554 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00042554
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04534.1| hypothetical protein Ccrd_017146 [Cynara carduncu...    53   3e-06

>gb|KVI04534.1| hypothetical protein Ccrd_017146 [Cynara cardunculus var. scolymus]
          Length = 126

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -2

Query: 117 DPGFIKLPGTTRSICGDSVVNAGSCPVKCFRPSPVCGVD 1
           +P  I LP +T S+C  SV N GSCP+KCFRP+PVCGVD
Sbjct: 31  NPDLIVLPSST-SLCPHSV-NPGSCPIKCFRPAPVCGVD 67


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