BLASTX nr result

ID: Chrysanthemum22_contig00042383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00042383
         (510 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023770563.1| uncharacterized protein LOC111919185 [Lactuc...    60   3e-08
gb|OTG15986.1| putative ribonuclease H-like domain-containing pr...    60   3e-07
ref|XP_021985440.1| extensin-like [Helianthus annuus]                  57   2e-06
ref|XP_022032079.1| extensin-1-like [Helianthus annuus]                56   2e-06

>ref|XP_023770563.1| uncharacterized protein LOC111919185 [Lactuca sativa]
          Length = 139

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +3

Query: 360 KQRVRYNPYAYHTS-SAIETEPPTFSVANKDPHWKNAMAEEYAALIRNGT 506
           K RV Y+P+AY  S S+ + EP TF+ ANK P W+ AM EEYAALIRN T
Sbjct: 19  KPRVPYDPFAYVVSTSSSDFEPTTFANANKSPQWRAAMVEEYAALIRNNT 68


>gb|OTG15986.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1320

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/49 (57%), Positives = 40/49 (81%)
 Frame = +3

Query: 360  KQRVRYNPYAYHTSSAIETEPPTFSVANKDPHWKNAMAEEYAALIRNGT 506
            KQ   YN  ++HTS+ +E+EP TF+VAN DP+W+ AMAEEY++L+R+GT
Sbjct: 919  KQTKPYNA-SFHTST-VESEPTTFTVANADPNWRKAMAEEYSSLVRHGT 965


>ref|XP_021985440.1| extensin-like [Helianthus annuus]
          Length = 274

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +3

Query: 375 YNPYAYH-TSSAIETEPPTFSVANKDPHWKNAMAEEYAALIRNGT 506
           YN  ++H T+   +TEP +F+VAN DP W++AMA+EY+AL+RNGT
Sbjct: 212 YNAASFHSTTHNPDTEPTSFTVANTDPKWRHAMADEYSALLRNGT 256


>ref|XP_022032079.1| extensin-1-like [Helianthus annuus]
          Length = 241

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +3

Query: 360 KQRVRYNPYAYHTS-SAIETEPPTFSVANKDPHWKNAMAEEYAALIRNGT 506
           KQ   Y P ++HT+ +   TEP TF++AN D HW+  MA+EY+AL++NGT
Sbjct: 176 KQSEPYIPSSFHTTPTPSTTEPTTFAIANTDSHWRRPMADEYSALLQNGT 225


Top