BLASTX nr result

ID: Chrysanthemum22_contig00041597 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00041597
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG05182.1| putative zinc finger, GRF-type [Helianthus annuus]      42   3e-07
gb|PLY79035.1| hypothetical protein LSAT_3X4400 [Lactuca sativa]       48   3e-06
ref|XP_023737550.1| uncharacterized protein LOC111885527 [Lactuc...    40   6e-06

>gb|OTG05182.1| putative zinc finger, GRF-type [Helianthus annuus]
          Length = 139

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +1

Query: 25  EVVRCPSCRIVCIIRTSWTATNPGRRFYCCV 117
           E+ RC SC  +  IRTSWT  NPGRRFY C+
Sbjct: 38  EMKRC-SCGRIATIRTSWTDDNPGRRFYSCL 67



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +2

Query: 191 SKHGLVDLYDSLMCQRAVQIIPGLLRSMNDQQAALSQIRLEARRLK 328
           S +  +   D LMC R+++IIPGLLR +N+ QA L     E R+ K
Sbjct: 71  SNYPFIGWIDPLMCLRSIRIIPGLLRKINNLQAKLFVREQEIRKKK 116


>gb|PLY79035.1| hypothetical protein LSAT_3X4400 [Lactuca sativa]
          Length = 93

 Score = 48.1 bits (113), Expect(2) = 3e-06
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = +2

Query: 191 SKHGLVDLYDSLMCQRAVQIIPGLLRSMNDQQAALSQIRLEARRLK 328
           S  G +  +D  MC+RAV +IPGLLRSMN  Q +L Q   EA+++K
Sbjct: 30  SSCGFIAWFDEPMCRRAVAVIPGLLRSMNKLQESLLQASFEAKKVK 75



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  CRIVCIIRTSWTATNPGRRFYCCVKPVSC 132
           C    +I TSWT  NP RRF+ C  P SC
Sbjct: 6   CGRQAVIVTSWTDLNPRRRFWKC--PSSC 32


>ref|XP_023737550.1| uncharacterized protein LOC111885527 [Lactuca sativa]
 ref|XP_023771971.1| uncharacterized protein LOC111920628 [Lactuca sativa]
 ref|XP_023728768.1| uncharacterized protein LOC111876472 [Lactuca sativa]
 ref|XP_023734701.1| uncharacterized protein LOC111882555 [Lactuca sativa]
          Length = 110

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +1

Query: 46  CRIVCIIRTSWTATNPGRRFYCCVKPVS 129
           CR   I+RTSWT  NPGRRF+ C  P S
Sbjct: 6   CRKWAIVRTSWTDNNPGRRFWGCPDPNS 33



 Score = 38.1 bits (87), Expect(2) = 6e-06
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +2

Query: 191 SKHGLVDLYDSLMCQRAVQIIPGLLRSMNDQQAALSQIRLEARR 322
           S  G +  YD  MC R+  IIPGLLR++N  + A+  I+ +A +
Sbjct: 33  SSCGFIGWYDEPMCARSKVIIPGLLRTINKLRKAMDDIKEQASK 76


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