BLASTX nr result

ID: Chrysanthemum22_contig00041412 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00041412
         (576 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11758.1| hypothetical protein Ccrd_009832 [Cynara carduncu...    68   3e-10
ref|XP_022037543.1| tetraspanin-8-like [Helianthus annuus] >gi|1...    66   2e-09
ref|XP_023733868.1| tetraspanin-8-like [Lactuca sativa] >gi|1322...    65   5e-09

>gb|KVI11758.1| hypothetical protein Ccrd_009832 [Cynara cardunculus var. scolymus]
          Length = 269

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 36/62 (58%), Positives = 39/62 (62%)
 Frame = -2

Query: 347 KIVNSETKRNRIRSCLVDSKVCKSLIDDGGRNTPVNEFYGRHLSAIHVNYLSFFLLCDCA 168
           K VNS+   N+IRSCL DSKVCKSLIDDG  N  VN FY RHLSAI          C+  
Sbjct: 124 KRVNSDRNWNKIRSCLQDSKVCKSLIDDGSENPSVNAFYARHLSAIQSGCCKPSDECNFT 183

Query: 167 YV 162
           YV
Sbjct: 184 YV 185


>ref|XP_022037543.1| tetraspanin-8-like [Helianthus annuus]
 gb|OTG24576.1| putative tetraspanin8 [Helianthus annuus]
          Length = 272

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 34/46 (73%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = -2

Query: 341 VNSETKRNRIRSCLVDSKVCKSLIDDG--GRNTPVNEFYGRHLSAI 210
           V+SE   N+IRSCL DSKVCKSLIDDG  G   PVNEFY RHLSAI
Sbjct: 126 VSSEKNWNKIRSCLQDSKVCKSLIDDGSSGAPVPVNEFYNRHLSAI 171


>ref|XP_023733868.1| tetraspanin-8-like [Lactuca sativa]
 gb|PLY73768.1| hypothetical protein LSAT_8X64521 [Lactuca sativa]
          Length = 269

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -2

Query: 347 KIVNSETKRNRIRSCLVDSKVCKSLIDDGGRNTPVNEFYGRHLSAI 210
           K VNS+   N+I+SCL DS VCKSLIDDG  NTPV+ FY RHLS+I
Sbjct: 124 KRVNSDKNWNKIKSCLEDSMVCKSLIDDGSDNTPVDVFYTRHLSSI 169


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