BLASTX nr result

ID: Chrysanthemum22_contig00041236 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00041236
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93617.1| XS domain-containing protein [Cynara cardunculus ...    60   5e-08
ref|XP_021996933.1| protein SUPPRESSOR OF GENE SILENCING 3 [Heli...    54   1e-05
gb|OTG04142.1| putative ribonuclease P [Helianthus annuus]             54   1e-05

>gb|KVH93617.1| XS domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 621

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = -1

Query: 358 LHEEKMAEMKSRHWRELLAMEAGHNTELSQLRAKYTPKYAVQG 230
           LHEEK AEMK RHWRE + +E G N ELS+L  KYT K+ VQG
Sbjct: 579 LHEEKTAEMKGRHWREEIELEEGLNAELSRLMDKYTSKHEVQG 621


>ref|XP_021996933.1| protein SUPPRESSOR OF GENE SILENCING 3 [Helianthus annuus]
 ref|XP_021996934.1| protein SUPPRESSOR OF GENE SILENCING 3 [Helianthus annuus]
 ref|XP_021996935.1| protein SUPPRESSOR OF GENE SILENCING 3 [Helianthus annuus]
 ref|XP_021996936.1| protein SUPPRESSOR OF GENE SILENCING 3 [Helianthus annuus]
          Length = 585

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -1

Query: 355 HEEKMAEMKSRHWRELLAMEAGHNTELSQLRAKYTPK 245
           HEEK+AEMKSRHW+E L +E G + EL+QL +KY P+
Sbjct: 548 HEEKIAEMKSRHWKEQLEIENGFDAELAQLMSKYIPE 584


>gb|OTG04142.1| putative ribonuclease P [Helianthus annuus]
          Length = 617

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -1

Query: 355 HEEKMAEMKSRHWRELLAMEAGHNTELSQLRAKYTPK 245
           HEEK+AEMKSRHW+E L +E G + EL+QL +KY P+
Sbjct: 580 HEEKIAEMKSRHWKEQLEIENGFDAELAQLMSKYIPE 616


Top