BLASTX nr result

ID: Chrysanthemum22_contig00041214 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00041214
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]        59   1e-07
gb|KVH91342.1| Nucleic acid-binding, OB-fold [Cynara cardunculus...    57   5e-07
ref|XP_023742355.1| replication protein A 70 kDa DNA-binding sub...    57   8e-07
gb|PLY67262.1| hypothetical protein LSAT_5X58221 [Lactuca sativa]      57   9e-07
ref|XP_023742362.1| replication protein A 70 kDa DNA-binding sub...    57   9e-07
gb|AFK40613.1| unknown [Medicago truncatula]                           54   7e-06

>gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]
          Length = 832

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEYYTI---PHPILLVCDVHVILTECDIIGDPKPYPHNKTSSIENIDD 172
           S +LQKGS+VQLT++         I+++ D+ VI+  CD IG+PKPYP     +  ++  
Sbjct: 72  SQKLQKGSIVQLTQFVCNLIQNRMIIIIIDLDVIVERCDPIGEPKPYPIKPDGNASSLPS 131

Query: 173 SRHVEEPPTSKQKPSASTQKCSSHSITQHNTDTIMGVN 286
            + V +P      P +S    S  S++      + G+N
Sbjct: 132 PQTVNQPSAGNVNPHSSYVGVSPSSVSAPRPPNVGGIN 169


>gb|KVH91342.1| Nucleic acid-binding, OB-fold [Cynara cardunculus var. scolymus]
          Length = 833

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEYY--TIPHPILLVC-DVHVILTECDIIGDPKPYPHNKTSSIENIDD 172
           S QLQKGS+VQLTE+   TI   I+++  D++VIL +CD+IGDPKP+P  K S  E    
Sbjct: 76  SQQLQKGSIVQLTEFACNTIRERIIIIIIDLNVILDKCDLIGDPKPFP-LKPSGSEASSM 134

Query: 173 SRHVEEPPTSKQKPSASTQKCSSHSITQHNTD 268
           +R      ++   PS+  Q  S+ +  Q++T+
Sbjct: 135 AR------SAAPLPSSLNQTASTLTDVQYSTE 160


>ref|XP_023742355.1| replication protein A 70 kDa DNA-binding subunit E-like [Lactuca
           sativa]
 gb|PLY67272.1| hypothetical protein LSAT_5X58641 [Lactuca sativa]
          Length = 315

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEYY--TIPHPILL-VCDVHVILTECDIIGDPKPYPHNKTSS 154
           S QLQKGS+V+LT++   TI   IL+ + D++VIL  CDIIGDPKP+PH   S+
Sbjct: 77  SQQLQKGSIVKLTKFLCITIRERILIKIIDLNVILGGCDIIGDPKPFPHELPSN 130


>gb|PLY67262.1| hypothetical protein LSAT_5X58221 [Lactuca sativa]
          Length = 640

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEYY--TI-PHPILLVCDVHVILTECDIIGDPKPYPHNKTSSIENIDD 172
           S QLQKGSVVQLTE+   TI   PI+++ +++VI+ +CD IGDPKP+P           D
Sbjct: 12  SQQLQKGSVVQLTEFVCNTIRERPIIIIINLNVIMEKCDTIGDPKPFPLKLPGG-----D 66

Query: 173 SRHVEEPPTSKQKPS 217
           +  +  P    Q PS
Sbjct: 67  TPSMTRPSPPTQSPS 81


>ref|XP_023742362.1| replication protein A 70 kDa DNA-binding subunit A-like [Lactuca
           sativa]
          Length = 703

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEYY--TI-PHPILLVCDVHVILTECDIIGDPKPYPHNKTSSIENIDD 172
           S QLQKGSVVQLTE+   TI   PI+++ +++VI+ +CD IGDPKP+P           D
Sbjct: 75  SQQLQKGSVVQLTEFVCNTIRERPIIIIINLNVIMEKCDTIGDPKPFPLKLPGG-----D 129

Query: 173 SRHVEEPPTSKQKPS 217
           +  +  P    Q PS
Sbjct: 130 TPSMTRPSPPTQSPS 144


>gb|AFK40613.1| unknown [Medicago truncatula]
          Length = 341

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   SNQLQKGSVVQLTEY---YTIPHPILLVCDVHVILTECDIIGDPKPYPHNKTSSIENIDD 172
           + +LQKGS+V+LT++   +     +L+V D+ VI+ +CD+IG P P P            
Sbjct: 68  NGRLQKGSIVKLTQFIYKHVRTRKLLIVVDLEVIMDKCDLIGKPDPAP------------ 115

Query: 173 SRHVEEPPTSKQKPSASTQKCSSHSITQHNTDTIMGVNLTPGAITKIMTDKCSSTDSSVD 352
               +E P       A   + ++  +       +M VNLT GAI K+         +S +
Sbjct: 116 ----KEAPALSAASHAGNVQSAAGQLESTAEKAVMAVNLTQGAIMKMCF-------TSEE 164

Query: 353 LKPVVQ 370
           ++PV+Q
Sbjct: 165 IQPVLQ 170


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