BLASTX nr result

ID: Chrysanthemum22_contig00041060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00041060
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021981332.1| F-box protein SKIP1 [Helianthus annuus] >gi|...    56   4e-06

>ref|XP_021981332.1| F-box protein SKIP1 [Helianthus annuus]
 gb|OTG14005.1| putative SKP1 interacting partner 1 [Helianthus annuus]
          Length = 308

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = -3

Query: 496 LKIEDG*RGTMFVCKSWFHATKYPSLHVVLDL*ASFEMRLSESARW 359
           L +ED   GTM VCKSW  A+K PSLH V DL +SF+ R  ES RW
Sbjct: 29  LTLEDRWNGTMLVCKSWLQASKDPSLHSVFDLESSFKSRPVESTRW 74


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