BLASTX nr result

ID: Chrysanthemum22_contig00040933 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00040933
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023749165.1| putative F-box/LRR-repeat protein At3g18150 ...    86   6e-17
ref|XP_023749162.1| putative FBD-associated F-box protein At5g56...    86   6e-17
ref|XP_021984455.1| uncharacterized protein LOC110880181 isoform...    75   4e-13
gb|KVI05896.1| F-box domain, cyclin-like protein, partial [Cynar...    64   3e-09
ref|XP_021984457.1| uncharacterized protein LOC110880181 isoform...    59   3e-07

>ref|XP_023749165.1| putative F-box/LRR-repeat protein At3g18150 isoform X2 [Lactuca
           sativa]
          Length = 559

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 57/117 (48%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = +3

Query: 81  MFTKTGRMIFDLQKKRKLSANKKLLMIDRKKKQQKTEH---LDDRVGSSEKPTVQS---V 242
           MF KT  +I D Q KR +S  KKLL I+RKK  QKTEH   L ++VG S+KP +Q+   +
Sbjct: 1   MFMKTRWLIIDRQLKRSIS--KKLLKINRKK--QKTEHSSSLGNQVGRSKKPNIQNKKGI 56

Query: 243 DNGADGVLVRESKRKLSSXXXXXXXXXXXXXMEKVDKMDEVDEPIDEISELPDLVIH 413
            +       R+SKRKLSS             MEKVDK+DEV EP D ISELP+ +IH
Sbjct: 57  PSYTPFTTTRKSKRKLSSIFKKVISSRKKQKMEKVDKVDEVVEPTDRISELPEPIIH 113


>ref|XP_023749162.1| putative FBD-associated F-box protein At5g56400 isoform X1 [Lactuca
           sativa]
 ref|XP_023749163.1| putative FBD-associated F-box protein At5g56400 isoform X1 [Lactuca
           sativa]
          Length = 592

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 57/117 (48%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = +3

Query: 81  MFTKTGRMIFDLQKKRKLSANKKLLMIDRKKKQQKTEH---LDDRVGSSEKPTVQS---V 242
           MF KT  +I D Q KR +S  KKLL I+RKK  QKTEH   L ++VG S+KP +Q+   +
Sbjct: 1   MFMKTRWLIIDRQLKRSIS--KKLLKINRKK--QKTEHSSSLGNQVGRSKKPNIQNKKGI 56

Query: 243 DNGADGVLVRESKRKLSSXXXXXXXXXXXXXMEKVDKMDEVDEPIDEISELPDLVIH 413
            +       R+SKRKLSS             MEKVDK+DEV EP D ISELP+ +IH
Sbjct: 57  PSYTPFTTTRKSKRKLSSIFKKVISSRKKQKMEKVDKVDEVVEPTDRISELPEPIIH 113


>ref|XP_021984455.1| uncharacterized protein LOC110880181 isoform X1 [Helianthus annuus]
 ref|XP_021984456.1| uncharacterized protein LOC110880181 isoform X1 [Helianthus annuus]
          Length = 614

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
 Frame = +3

Query: 81  MFTKTGRMIFDLQKKRKLSANKKLLMIDRKK-KQQKTEHLDDRVGSSEKPTVQSVDNGAD 257
           MF    R+I D + K ++SANK LLMI RKK K  ++  L    G   K  V+     A 
Sbjct: 1   MFINLRRLIIDSRLKSRISANK-LLMIKRKKDKTGRSSRLGGPAGYDRKLVVKEGQTLAS 59

Query: 258 GV------LVRESKRKLSSXXXXXXXXXXXXXMEKVDKMDEVDEPIDEISELPDLVIH 413
           G       ++RESKRKLSS             MEK+DK+DE+ EP+D IS+LP+ +IH
Sbjct: 60  GSCKKGVSVIRESKRKLSSVLRKGIRGRKKRKMEKIDKVDEIVEPVDRISDLPEPIIH 117


>gb|KVI05896.1| F-box domain, cyclin-like protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 725

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
 Frame = +3

Query: 81  MFTKTGRMIFDLQKKRKLSANKKLLMIDRKKKQQKTEHLDDRVGSSEKPTVQSVDN---G 251
           M  KT R+I D Q KRK SANKK      K+K + +  L D+VG  +K  +Q+VD    G
Sbjct: 1   MLMKTTRLIIDRQLKRKFSANKK------KQKTEYSSSLGDQVGYRKKLNIQNVDGIEKG 54

Query: 252 ADGVLV----------------RESKRKLSSXXXXXXXXXXXXXMEKVDKMDEVDEPIDE 383
            + ++                  +SK + SS             MEKV K+DEV EP+D 
Sbjct: 55  DENLIFGSCQKGSSSNWPVKTNTKSKTRRSSILRKDIRGRKKRKMEKVVKVDEVVEPMDL 114

Query: 384 ISELPDLVIH 413
           ISELP  +IH
Sbjct: 115 ISELPVSIIH 124


>ref|XP_021984457.1| uncharacterized protein LOC110880181 isoform X2 [Helianthus annuus]
 gb|OTG16863.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 590

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = +3

Query: 156 MIDRKK-KQQKTEHLDDRVGSSEKPTVQSVDNGADGV------LVRESKRKLSSXXXXXX 314
           MI RKK K  ++  L    G   K  V+     A G       ++RESKRKLSS      
Sbjct: 1   MIKRKKDKTGRSSRLGGPAGYDRKLVVKEGQTLASGSCKKGVSVIRESKRKLSSVLRKGI 60

Query: 315 XXXXXXXMEKVDKMDEVDEPIDEISELPDLVIH 413
                  MEK+DK+DE+ EP+D IS+LP+ +IH
Sbjct: 61  RGRKKRKMEKIDKVDEIVEPVDRISDLPEPIIH 93


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