BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00040383
         (1232 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               122   3e-49
ref|XP_015159724.1| PREDICTED: uncharacterized protein LOC107058...   115   5e-38
ref|XP_021992013.1| uncharacterized protein LOC110888816 [Helian...   120   3e-32
ref|XP_021996734.1| uncharacterized protein LOC110893890 [Helian...   118   3e-31
ref|XP_022008113.1| uncharacterized protein LOC110907437 [Helian...   116   6e-31
ref|XP_021974852.1| uncharacterized protein LOC110869960 [Helian...   115   8e-31
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   106   2e-28
gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu...   112   1e-27
gb|AQK42987.1| Protein RAE1 [Zea mays] >gi|1142648004|gb|AQK4299...   102   1e-27
gb|AQK42997.1| Protein RAE1 [Zea mays]                                102   1e-27
gb|AQK51449.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   101   2e-27
gb|AQK67802.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   103   3e-27
ref|XP_017229024.1| PREDICTED: uncharacterized protein LOC108204...   107   3e-27
gb|ONM32657.1| Fidgetin-like protein 1 [Zea mays]                     100   4e-27
ref|XP_017228574.1| PREDICTED: uncharacterized protein LOC108203...   106   4e-27
gb|AQK83596.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   100   6e-27
gb|AQK62699.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   100   7e-27
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   100   7e-27
gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   100   7e-27
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   100   7e-27

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  122 bits (307), Expect(4) = 3e-49
 Identities = 88/249 (35%), Positives = 118/249 (47%), Gaps = 49/249 (19%)
 Frame = -2

Query: 1018 YFSSFFNE--RMTVGRKEVENSSQHLQYEW---ISQGEVRTALRKMGRNKVV-------- 878
            YF + FNE    +    E+ NS +   Y +   I + EV  AL+KM   K +        
Sbjct: 527  YFHNLFNEGHERSASLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIE 586

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  + G+ WLT LFN+I  + KMP EWR   ++PI KNKGD Q C NY GIKL  H+
Sbjct: 587  VWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHT 646

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVF-PNRSRTSPWISH*PVPLCLHP**AIMRDTRE--- 548
            MKLW+RV E RLR+E  VS+N   F P RS              ++    +M   R+   
Sbjct: 647  MKLWERVIEHRLRQETRVSDNQFGFMPGRSTME----------AIYLLRRLMERYRDGKK 696

Query: 547  --HPLVHD------------------------FTDDIVLVSESAEGLNNILDHWREALED 446
              H +  D                        F DDIVL+ E+ EG+N  L+ WRE LE 
Sbjct: 697  DLHMVFIDLEKAYDRVPRDILWRILEKKGCMLFADDIVLIDETQEGVNAKLNLWREVLES 756

Query: 445  NGLRVTERR 419
             GLR++  +
Sbjct: 757  KGLRLSRSK 765



 Score = 49.7 bits (117), Expect(4) = 3e-49
 Identities = 20/48 (41%), Positives = 34/48 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNE 1045
            Y+++YK+LD+K   +DIY++ + +E++ RDL   R IKDE G+ +  E
Sbjct: 470  YDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATE 517



 Score = 48.1 bits (113), Expect(4) = 3e-49
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = -3

Query: 270 NPPFRAAWLKWRAACGVLCDREVPLKLKGDF 178
           N   +A W+KW++A GVLCDR +PLKLKG F
Sbjct: 815 NHRIQAGWMKWKSASGVLCDRRMPLKLKGKF 845



 Score = 46.2 bits (108), Expect(4) = 3e-49
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRVD-DVTHRLE 255
           +R KTEY+ C+F  N      E+ + IGDQ +   + F +LGS++ K+G +D D+ HR++
Sbjct: 762 SRSKTEYMECKFSANG--GQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGDLNHRIQ 819


>ref|XP_015159724.1| PREDICTED: uncharacterized protein LOC107058478 [Solanum tuberosum]
          Length = 448

 Score =  115 bits (289), Expect(3) = 5e-38
 Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = -2

Query: 871 GVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMKLWKRVT 692
           G++WLT LFN IF   KMP EWR   ++P+ KNKGD Q C NY GIKL  H+MK+W+RV 
Sbjct: 194 GIEWLTGLFNVIFKIAKMPDEWRWSTMVPLYKNKGDIQNCNNYRGIKLLSHTMKIWERVV 253

Query: 691 ERRLRKEPGVSEN*LVF-PNRSRTSPWISH*PVPLCLHP**AIMRDTREHPLVHDFTDDI 515
           E R+R+   +SEN   F P  S T            +H    +MR  R  P    F DDI
Sbjct: 254 EMRVRRGVSISENQFGFMPGWSTTE----------AIH----LMRRLRRSPWCMLFADDI 299

Query: 514 VLVSESAEGLNNILDHWREALEDNGLRVTERR 419
           VL+ E+ + +N  L+ WR+ +E  G +++  +
Sbjct: 300 VLIDETRDRVNARLEVWRQTIESKGFKLSRTK 331



 Score = 48.1 bits (113), Expect(3) = 5e-38
 Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRV-DDVTHRL 258
           +R KTEYL C+F  +E +   + ++ +  QI+  KE F +LGSVI +SG + DDVTHR+
Sbjct: 328 SRTKTEYLGCKF--SEALDEADGEVRLDTQIIPKKESFKYLGSVIQESGDIDDDVTHRI 384



 Score = 44.7 bits (104), Expect(3) = 5e-38
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -3

Query: 255 AAWLKWRAACGVLCDREVPLKLKGDFI 175
           AAW+KWR A GVLCD+++P KLKG  I
Sbjct: 386 AAWMKWRLASGVLCDKKIPPKLKGQGI 412


>ref|XP_021992013.1| uncharacterized protein LOC110888816 [Helianthus annuus]
          Length = 1016

 Score =  120 bits (301), Expect(2) = 3e-32
 Identities = 72/157 (45%), Positives = 87/157 (55%), Gaps = 25/157 (15%)
 Frame = -2

Query: 1018 YFSSFFNERMTVGRKEVENSSQHLQYEW----------ISQGEVRTALRKMGRNKVV--- 878
            YF + FN     G KE E  S H   +           I+ GEVRT L+KMGR K V   
Sbjct: 496  YFRNLFN-----GGKEAEEESDHNNIQGRQRNNCYCRSITMGEVRTTLKKMGRAKAVGPD 550

Query: 877  -----------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIK 731
                       ++GV+WL  LFN IF   K+P +WR   V+P+ KNKGDAQ CGNY GIK
Sbjct: 551  NIPIEVWKCFGEDGVRWLASLFNVIFKFGKIPDQWRSSVVVPLYKNKGDAQCCGNYRGIK 610

Query: 730  LCCHSMKLWKRVTERRLRKEPGVSEN*LVF-PNRSRT 623
            L  H+MKLW+RV E R+RKE  V+ N   F P RS T
Sbjct: 611  LLSHTMKLWERVIETRIRKETQVTVNQFGFMPGRSTT 647



 Score = 48.1 bits (113), Expect(2) = 3e-32
 Identities = 20/51 (39%), Positives = 37/51 (72%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+++Y +L++K     ++RI K +ERR++DLGV ++IK E G  +V E+++
Sbjct: 439  YKKMYDRLETKEGEHAMFRIAKARERRKQDLGVVKFIKGEDGHVLVREQDI 489



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
 Frame = -3

Query: 642  FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
            FP+E+GLH G A+SP+LF  +L+ELS  IQE++PWCM+                      
Sbjct: 724  FPVEIGLHQGSALSPFLFAVVLDELSKSIQETVPWCMLFAD------------------- 764

Query: 462  GRH*KIMVYG*PREDRISKM*VWQ---ERDSL---QQRSGYMY---------RRPDPTSK 328
                 I++    R+   +++  W+   E + L   + ++ Y+Y           P  T +
Sbjct: 765  ----DIVLVAETRQTLNARLEEWRAVLEGNGLRISRSKTEYLYCNFGGADDNEDPQLTIE 820

Query: 327  GVFLTPRFCDTQV------REGRRCNPPFRAAWLKW---RAACGVLCDREVPLKLKGDFI 175
            G  + P+    +       R+G   +  +      W   RAA G+LCDR  P KLKG F 
Sbjct: 821  GQ-VVPQMTKFKYLGSFVQRDGEIDSDVYHRIQAGWCRWRAATGILCDRRFPTKLKGKFY 879

Query: 174  LYAFAFIVLH 145
              A    +L+
Sbjct: 880  RVALRPAMLY 889


>ref|XP_021996734.1| uncharacterized protein LOC110893890 [Helianthus annuus]
          Length = 1016

 Score =  118 bits (295), Expect(2) = 3e-31
 Identities = 65/119 (54%), Positives = 77/119 (64%), Gaps = 15/119 (12%)
 Frame = -2

Query: 934 ISQGEVRTALRKMGRNKVV--------------DEGVKWLTILFNKIFISDKMPGEWRLG 797
           I++ EVRTAL KMGR K V              +EGV WLTILFN IF S KMP +WR  
Sbjct: 529 ITREEVRTALSKMGRAKAVGPDNIPIEVWKCLGEEGVHWLTILFNLIFKSGKMPDQWRNS 588

Query: 796 EVIPINKNKGDAQVCGNYWGIKLCCHSMKLWKRVTERRLRKEPGVSEN*LVF-PNRSRT 623
            V+P+ KNKGDAQ CGNY GIKL  H+MKLW+R+ E R+R+E  V+ N   F P RS T
Sbjct: 589 VVVPVYKNKGDAQCCGNYRGIKLLGHTMKLWERIIETRIRRETQVTVNQFGFMPGRSTT 647



 Score = 47.4 bits (111), Expect(2) = 3e-31
 Identities = 19/51 (37%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+++Y +L++K    D+++I K +ERRR+DLG  +++K E G  +V E ++
Sbjct: 464  YKQMYDRLETKEGEHDMFKIAKARERRRQDLGAVKFLKGEDGCVLVKEHDI 514



 Score = 53.9 bits (128), Expect(4) = 2e-23
 Identities = 22/38 (57%), Positives = 31/38 (81%)
 Frame = -3

Query: 642 FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMI 529
           FP+EVGLH G A+SP+LF  IL+EL+  IQ ++PWC++
Sbjct: 724 FPVEVGLHQGSALSPFLFAVILDELTKLIQGALPWCLL 761



 Score = 43.5 bits (101), Expect(4) = 2e-23
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = -3

Query: 258 RAAWLKWRAACGVLCDREVPLKLKGDFILYAFAFIVLH 145
           +  W +WRAA GVLCDR  P KLKG F   A    +L+
Sbjct: 852 QVGWCRWRAATGVLCDRRFPTKLKGKFYRVAIRPAMLY 889



 Score = 41.6 bits (96), Expect(4) = 2e-23
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -2

Query: 529 FTDDIVLVSESAEGLNNILDHWREALEDNGLRVTERR 419
           F DDIVL+++S + LN  L+ WR ALE  GLR++  +
Sbjct: 762 FADDIVLLADSKQSLNVRLEEWRAALEGRGLRISRSK 798



 Score = 39.7 bits (91), Expect(4) = 2e-23
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRVD-DVTHRLE 255
           +R KTEYL C+F  + +  ++++ I I  Q +     F +LGS + + G +D DV HR++
Sbjct: 795 SRSKTEYLYCDF--SGVDNDEDIQITIDGQAVPQVTKFKYLGSFVQRDGEIDSDVAHRIQ 852


>ref|XP_022008113.1| uncharacterized protein LOC110907437 [Helianthus annuus]
          Length = 1160

 Score =  116 bits (291), Expect(2) = 6e-31
 Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 20/152 (13%)
 Frame = -2

Query: 1018 YFSSFFNERMT----VGRKEVENSSQHLQYEW-ISQGEVRTALRKMGRNKVV-------- 878
            YF + FN RM     +    ++   ++  Y+  I+ GEVRTALRKMGR + +        
Sbjct: 640  YFHNLFNGRMDYQQQIDNPSIQRRQRNSGYDQSITHGEVRTALRKMGRAEAIGLDNIPIE 699

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  +EGV+ LT LFN IF S KMP +WR   V+P+ KNKGDAQ C NY GIKL  H+
Sbjct: 700  AWLCLGEEGVQCLTSLFNLIFSSGKMPDQWRRSVVVPLYKNKGDAQCCENYRGIKLLSHT 759

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVF-PNRSRT 623
            MKLW+R  E R+R+E  V+ N   F P RS T
Sbjct: 760  MKLWERKIETRIRRETQVTVNQFGFMPGRSTT 791



 Score = 47.8 bits (112), Expect(2) = 6e-31
 Identities = 20/51 (39%), Positives = 37/51 (72%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+ +Y+ L++K     +++I K +ERRR+DLG+ ++IK + GR +VNE ++
Sbjct: 583  YKMMYESLETKEGEHRMFKIAKARERRRQDLGIVKFIKGDDGRVLVNELDI 633



 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -3

Query: 645 FFPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMI 529
           FFP+E+GLH G A+S +LF  +L+ELS  IQE IPWCM+
Sbjct: 867 FFPVEIGLHQGSALSLFLFAVVLDELSKSIQEPIPWCML 905



 Score = 41.6 bits (96), Expect(2) = 1e-11
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -2

Query: 529  FTDDIVLVSESAEGLNNILDHWREALEDNGLRVTERRQNI*DVSLAGT 386
            F DDIVLV+E+   LN  L+ WR ALE  GLR +  +        +GT
Sbjct: 906  FADDIVLVAETKHRLNERLEEWRVALEGKGLRSSRSKTEYLHCDFSGT 953


>ref|XP_021974852.1| uncharacterized protein LOC110869960 [Helianthus annuus]
          Length = 968

 Score =  115 bits (288), Expect(2) = 8e-31
 Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 20/152 (13%)
 Frame = -2

Query: 1018 YFSSFFNERMTVGRKE----VENSSQHLQYEW-ISQGEVRTALRKMGRNKVV-------- 878
            YF + FN R+   ++     ++   +H  Y+  I+ GEVRT LRKMGR K +        
Sbjct: 417  YFHNLFNGRIDYQQQSENPTIQRRQRHSGYDQSITHGEVRTTLRKMGRAKAIGLDNIPIE 476

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  +EGV+WL  LFN IF   KMP +WR   V+P+ KNKGDAQ   NY GIKL  H+
Sbjct: 477  TWLCLGEEGVQWLQSLFNLIFSLGKMPDQWRRSVVVPLYKNKGDAQCRENYRGIKLLSHT 536

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVF-PNRSRT 623
            MKLW+R+ E R+R+E  V+ N   F P RS T
Sbjct: 537  MKLWERIIETRIRRETQVTVNQFCFMPGRSTT 568



 Score = 48.5 bits (114), Expect(2) = 8e-31
 Identities = 21/51 (41%), Positives = 37/51 (72%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+ +Y+ L++K     +++I K +ERRR+DLGV ++IK + GR +VNE ++
Sbjct: 360  YKMMYESLETKEGEHHMFKIAKARERRRQDLGVVKFIKGDDGRVLVNELDI 410



 Score = 62.0 bits (149), Expect(2) = 9e-14
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -3

Query: 645 FFPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMI 529
           FFP+E+GLH G A+SP+LF  +L+ELS  IQE IPWCM+
Sbjct: 644 FFPVEIGLHQGSALSPFLFAVVLDELSKSIQEPIPWCML 682



 Score = 44.7 bits (104), Expect(2) = 9e-14
 Identities = 21/48 (43%), Positives = 30/48 (62%)
 Frame = -2

Query: 529 FTDDIVLVSESAEGLNNILDHWREALEDNGLRVTERRQNI*DVSLAGT 386
           F DDIVLV+E+ + LN  L+ WR ALE  GLR++  + +      +GT
Sbjct: 683 FADDIVLVAETKQRLNERLEEWRVALEGKGLRISRSKTDYLHCDFSGT 730


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  106 bits (265), Expect(2) = 2e-28
 Identities = 65/150 (43%), Positives = 82/150 (54%), Gaps = 20/150 (13%)
 Frame = -2

Query: 1018 YFSSFFNE--RMTVGRKEVENSSQHLQYEW---ISQGEVRTALRKMGRNKVV-------- 878
            YF + FNE    +    E+ NS +   Y +   I + EV  AL+KM   K V        
Sbjct: 131  YFHNLFNEGHERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIE 190

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  + G+ WL  LFN+I  + KMP EWR   ++PI KNKGD Q C NY GIKL  H+
Sbjct: 191  VWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHT 250

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            MKLW+RV E RLR+E  VS+N   F P RS
Sbjct: 251  MKLWERVIEHRLRQETRVSDNQFGFMPGRS 280



 Score = 49.7 bits (117), Expect(2) = 2e-28
 Identities = 20/48 (41%), Positives = 34/48 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNE 1045
            Y+++YK+LD+K   +DIY++ + +E++ RDL   R IKDE G+ +  E
Sbjct: 74   YDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATE 121



 Score = 75.5 bits (184), Expect = 6e-11
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
 Frame = -3

Query: 642 FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
           FPI VGLH G ++SPYLF  +++EL+  IQ+ IPWCM+                      
Sbjct: 359 FPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAY------------------- 399

Query: 462 GRH*KIMVYG*PREDRISKM*VWQE------RDSLQQRSGYMYRRPDPTSKGVFLTPRFC 301
                I++    +E   +K+ +W+E          + ++ YM  +         L  R  
Sbjct: 400 ----DIVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYMECKFSANGSQNELGVRIG 455

Query: 300 DTQVREGRR-----------------CNPPFRAAWLKWRAACGVLCDREVPLKLKGDF 178
           D ++ +  R                  N   +A W+KW++A GVLCDR +PLKLKG F
Sbjct: 456 DQEIPKSDRFRYLGSILQKNGELDEDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKF 513


>gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 819

 Score =  112 bits (279), Expect(2) = 1e-27
 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 19/149 (12%)
 Frame = -2

Query: 1018 YFSSFFNERMT-VGRKEVENSSQHLQYEW---ISQGEVRTALRKMGRNKVVD-------- 875
            YF S FNE    +    V+   + L Y +   I + EVR AL+++   K V         
Sbjct: 298  YFHSLFNESQDRLQSYRVDRREEGLNYTYCRRIREVEVREALKRLENGKAVGPDTIPIEV 357

Query: 874  ------EGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSM 713
                  +G+ WLT LFN+I  S+KMP EWR   +IPI KNKGD Q C NY GIKL  H+M
Sbjct: 358  WKTLGAKGISWLTKLFNEIMRSNKMPEEWRRSTLIPIYKNKGDIQDCANYRGIKLMSHTM 417

Query: 712  KLWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            KLW+RV ERRLR+E  V+EN   F P RS
Sbjct: 418  KLWERVIERRLRQETQVTENQFGFMPGRS 446



 Score = 41.6 bits (96), Expect(2) = 1e-27
 Identities = 22/60 (36%), Positives = 36/60 (60%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEELGKDEKSISH 1009
            Y+ LY  L +K    +IYR+ K ++RR RDL   + IKD  GR +V++ ++ +  +S  H
Sbjct: 241  YDGLYTSLGTKEGEQNIYRLAKSRDRRTRDLEQVKCIKDGEGRVLVSDMDIKERWRSYFH 300



 Score = 67.0 bits (162), Expect = 4e-08
 Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
 Frame = -3

Query: 642  FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
            FPI +GLH G  +SPYLF  +++ L+  +QE +P CM+                      
Sbjct: 525  FPITIGLHQGSTLSPYLFTLVMDALTEHVQEPVPRCMLFAD------------------- 565

Query: 462  GRH*KIMVYG*PREDRISKM*VWQ---ERDSLQ---QRSGYM-----YRRPDPTSK---- 328
                 I++ G  RE+   K+  W+   E   L+    ++ YM      R    T +    
Sbjct: 566  ----DIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYMECKFSMRNTRATQEVKIG 621

Query: 327  --GVFLTPRF--CDTQVREGRRCNPP----FRAAWLKWRAACGVLCDREVPLKLKGDFIL 172
               +   PRF    + V++            +A W+KWR A GVLCD++VPLKLKG F  
Sbjct: 622  EQAITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLKGKFYR 681

Query: 171  YAFAFIVLH 145
             A    +L+
Sbjct: 682  TAVRPAILY 690


>gb|AQK42987.1| Protein RAE1 [Zea mays]
 gb|AQK42990.1| Protein RAE1 [Zea mays]
 gb|AQK43010.1| Protein RAE1 [Zea mays]
 gb|AQK43011.1| Protein RAE1 [Zea mays]
          Length = 1110

 Score =  102 bits (254), Expect(2) = 1e-27
 Identities = 62/148 (41%), Positives = 81/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   ER T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 139  YFNKLFNGGNERATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 198

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 199  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 258

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 259  LWERVIEHRLRKMTSVTQNQFGFMPGRS 286



 Score = 50.8 bits (120), Expect(2) = 1e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 82   YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 132


>gb|AQK42997.1| Protein RAE1 [Zea mays]
          Length = 1109

 Score =  102 bits (254), Expect(2) = 1e-27
 Identities = 62/148 (41%), Positives = 81/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   ER T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 139  YFNKLFNGGNERATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 198

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 199  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 258

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 259  LWERVIEHRLRKMTSVTQNQFGFMPGRS 286



 Score = 50.8 bits (120), Expect(2) = 1e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 82   YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 132


>gb|AQK51449.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 693

 Score =  101 bits (252), Expect(2) = 2e-27
 Identities = 62/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  N +       I + EV+ AL++M   K +          
Sbjct: 332  YFNKLFNGGNESSTIELDEPFNDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 391

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 392  RCLGDIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 451

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 452  LWERVIEHRLRKLTSVTQNQFGFMPGRS 479



 Score = 51.2 bits (121), Expect(2) = 2e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            ++ LY++LD+K R  DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 275  FDNLYQRLDTKQREKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 325


>gb|AQK67802.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 939

 Score =  103 bits (257), Expect(2) = 3e-27
 Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +  +    I + EV+ AL++M   KV+          
Sbjct: 464  YFNKLFNGGNESSTIELDEPFDDNNRVFVRRIQEYEVKEALKRMKVGKVMGPDGIPIEVW 523

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 524  RCLGDIAIVWLTKLFNTIFRTNRMPNEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 583

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 584  LWERVIEHRLRKLTSVTQNQFGFMPGRS 611



 Score = 48.5 bits (114), Expect(2) = 3e-27
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            ++ LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 407  FDNLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 457


>ref|XP_017229024.1| PREDICTED: uncharacterized protein LOC108204206 [Daucus carota subsp.
            sativus]
          Length = 813

 Score =  107 bits (266), Expect(2) = 3e-27
 Identities = 68/150 (45%), Positives = 83/150 (55%), Gaps = 20/150 (13%)
 Frame = -2

Query: 1018 YFSSFFNE---RMTVGRKEVENSSQHL--QYEWISQGEVRTALRKMGRNKVV-------- 878
            YFS  FN    R  V  +E  N S +     + I+  EVR AL  MG+ K V        
Sbjct: 315  YFSELFNAARGREIVFEQENVNVSHNDVGMSQDITMAEVRVALGMMGKGKTVGLDEIPIE 374

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  + GV+WLT L N IF + +MP EWRL  V+PI KNKGDAQ C NY GIKL  H+
Sbjct: 375  VWQCLGEHGVRWLTALLNVIFRTSRMPSEWRLSVVVPIYKNKGDAQSCSNYRGIKLLSHT 434

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            MKLW+RV E R+R+   +S N   F P RS
Sbjct: 435  MKLWERVIECRIRRIVTISVNQFGFMPGRS 464



 Score = 45.1 bits (105), Expect(2) = 3e-27
 Identities = 17/51 (33%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+++Y++L +K    +I+++ K + +R +D+G  RYIKDEG R ++ + ++
Sbjct: 258  YQDMYRRLGTKEGVNEIFKLAKARNKRSQDIGAVRYIKDEGDRVLLYDGDI 308



 Score = 44.3 bits (103), Expect(4) = 4e-12
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -3

Query: 249 WLKWRAACGVLCDREVPLKLKGDF 178
           WL+W AA GVLCD+ VPLKLKG F
Sbjct: 642 WLRWWAATGVLCDKNVPLKLKGKF 665



 Score = 37.7 bits (86), Expect(4) = 4e-12
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -2

Query: 529 FTDDIVLVSESAEGLNNILDHWREALEDNGLRVTERR 419
           F DDIVL++ES   +N  L+ WR +LE  GLR++  +
Sbjct: 549 FADDIVLIAESRSEVNVKLEQWRMSLEGYGLRLSHSK 585



 Score = 36.6 bits (83), Expect(4) = 4e-12
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRVD-DVTHRL 258
           +  KT+YL   F  +E ++  +V +CI +  +     F +LGS+I  +G +  DVTHR+
Sbjct: 582 SHSKTKYLWANF--SEEIHEADVAVCIAEGRVPQTNTFKYLGSIIQSNGDISADVTHRI 638



 Score = 21.2 bits (43), Expect(4) = 4e-12
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 561 GIQESIPWCMI 529
           GI   +PWCM+
Sbjct: 538 GILTPVPWCML 548


>gb|ONM32657.1| Fidgetin-like protein 1 [Zea mays]
          Length = 577

 Score =  100 bits (250), Expect(2) = 4e-27
 Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 18/153 (11%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +     + I + EV+ AL++M   K +          
Sbjct: 423  YFNKLFNGGNESSTIELDEPFDDNNRGFVQRIQEYEVKEALKRMKAGKAMGPDGIPIEVW 482

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 483  RCLGDIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCSNYRGIKLMSHTMK 542

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRSRTSPW 614
            LW+RV E RL K   V++N   F P RS   P+
Sbjct: 543  LWERVIEHRLWKMTSVTQNQFGFMPGRSTWRPF 575



 Score = 50.8 bits (120), Expect(2) = 4e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 366  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 416


>ref|XP_017228574.1| PREDICTED: uncharacterized protein LOC108203882 [Daucus carota subsp.
            sativus]
          Length = 488

 Score =  106 bits (265), Expect(2) = 4e-27
 Identities = 67/150 (44%), Positives = 82/150 (54%), Gaps = 19/150 (12%)
 Frame = -2

Query: 1018 YFSSFFNE---RMTVGRKEVENSSQHL--QYEWISQGEVRTALRKMGRNKVV-------- 878
            YFS  FN    R  V  +E  N S +     + I+  EVR AL  MG+ K V        
Sbjct: 315  YFSELFNAARGREIVFEQENVNVSHNDVGMSQDITMAEVRVALGMMGKGKTVGLDEIPIE 374

Query: 877  ------DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHS 716
                  + GV+WLT L N IF + +MP EWRL  V+PI KNKGDAQ C NY GIKL  H+
Sbjct: 375  VWQCLGEHGVRWLTALLNVIFRTSRMPSEWRLSVVVPIYKNKGDAQSCSNYRGIKLLSHT 434

Query: 715  MKLWKRVTERRLRKEPGVSEN*LVFPNRSR 626
            MKLW+RV E R+R+   +S N   F   SR
Sbjct: 435  MKLWERVIECRIRRIVTISVNQFGFMPGSR 464



 Score = 45.1 bits (105), Expect(2) = 4e-27
 Identities = 17/51 (33%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y+++Y++L +K    +I+++ K + +R +D+G  RYIKDEG R ++ + ++
Sbjct: 258  YQDMYRRLGTKEGVNEIFKLAKARNKRSQDIGAVRYIKDEGDRVLLYDGDI 308


>gb|AQK83596.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK83605.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK83607.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 2404

 Score =  100 bits (248), Expect(2) = 6e-27
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 498  YFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 557

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 558  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 617

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 618  LWERVIEHRLRKMTSVTQNQFGFMPGRS 645



 Score = 50.8 bits (120), Expect(2) = 6e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 441  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491



 Score = 46.2 bits (108), Expect(2) = 5e-09
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = -3

Query: 258 RAAWLKWRAACGVLCDREVPLKLKGDF 178
           +A WLKWR A GVLCD  VP KLKG F
Sbjct: 746 KAGWLKWRQAAGVLCDHRVPRKLKGKF 772



 Score = 44.3 bits (103), Expect(2) = 5e-09
 Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRVD-DVTHRLE 255
           +R KTEY++C+F     +  ++ D+ +  Q++  K+ F +LGS++ K G +D DV+HR++
Sbjct: 690 SRSKTEYMKCDF---SAMGYEDGDVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIK 746


>gb|AQK62699.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1117

 Score =  100 bits (248), Expect(2) = 7e-27
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 629  YFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 688

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 689  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 748

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 749  LWERVIEHRLRKMTSVTQNQFGFMPGRS 776



 Score = 50.8 bits (120), Expect(2) = 7e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 572  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 622



 Score = 46.2 bits (108), Expect(2) = 5e-09
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = -3

Query: 258 RAAWLKWRAACGVLCDREVPLKLKGDF 178
           +A WLKWR A GVLCD  VP KLKG F
Sbjct: 877 KAGWLKWRQAAGVLCDHRVPRKLKGKF 903



 Score = 44.3 bits (103), Expect(2) = 5e-09
 Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -1

Query: 431 NREKTEYLRCEFGRNEIVYNKEVDICIGDQILHPKEFF*HLGSVIHKSGRVD-DVTHRLE 255
           +R KTEY++C+F     +  ++ D+ +  Q++  K+ F +LGS++ K G +D DV+HR++
Sbjct: 821 SRSKTEYMKCDF---SAMGYEDGDVSLDGQVVPKKDTFRYLGSMLQKEGDIDEDVSHRIK 877


>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score =  100 bits (248), Expect(2) = 7e-27
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 520  YFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 579

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 580  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 639

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 640  LWERVIEHRLRKMTSVTQNQFGFMPGRS 667



 Score = 50.8 bits (120), Expect(2) = 7e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 463  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 513



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
 Frame = -3

Query: 642  FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
            FPI +GLH G A+S YLF  +++E++  IQ  +PWCM+                      
Sbjct: 746  FPINIGLHQGSALSTYLFALVIDEVTRDIQGVLPWCMLFAD------------------- 786

Query: 462  GRH*KIMVYG*PREDRISKM*VWQE----RDSLQQRSGYMYRRPDPTSKGVFLTPRFCDT 295
                 +++    R     K+ +W++    +     RS   Y + D ++ G        D 
Sbjct: 787  ----DVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDG 842

Query: 294  QV---------------REG---RRCNPPFRAAWLKWRAACGVLCDREVPLKLKGDFILY 169
            QV               +EG      +   +A WLKWR A GVLCD  VP KLKG F   
Sbjct: 843  QVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRT 902

Query: 168  AFAFIVLH 145
            A    +L+
Sbjct: 903  AIRPAILY 910


>gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  100 bits (248), Expect(2) = 7e-27
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 498  YFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 557

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 558  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 617

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 618  LWERVIEHRLRKMTSVTQNQFGFMPGRS 645



 Score = 50.8 bits (120), Expect(2) = 7e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 441  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491



 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
 Frame = -3

Query: 642  FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
            FPI +GLH G A+SPYLF  +++E++  IQ  +PWCM+                      
Sbjct: 724  FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFAD------------------- 764

Query: 462  GRH*KIMVYG*PREDRISKM*VWQE----RDSLQQRSGYMYRRPDPTSKGVFLTPRFCDT 295
                 +++    R     K+ +W++    +     RS   Y + D ++ G        D 
Sbjct: 765  ----DVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVSLDG 820

Query: 294  QV---------------REG---RRCNPPFRAAWLKWRAACGVLCDREVPLKLKGDF 178
            QV               +EG      +   +A WLKWR A GVLCD  VP KLKG F
Sbjct: 821  QVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKF 877


>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  100 bits (248), Expect(2) = 7e-27
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
 Frame = -2

Query: 1018 YFSSFFN---ERMTVGRKEVENSSQHLQYEWISQGEVRTALRKMGRNKVV---------- 878
            YF+  FN   E  T+   E  + +       I + EV+ AL++M   K +          
Sbjct: 498  YFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVW 557

Query: 877  ----DEGVKWLTILFNKIFISDKMPGEWRLGEVIPINKNKGDAQVCGNYWGIKLCCHSMK 710
                D  + WLT LFN IF +++MP EWR   ++PI KNKGD Q C NY GIKL  H+MK
Sbjct: 558  RCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMK 617

Query: 709  LWKRVTERRLRKEPGVSEN*LVF-PNRS 629
            LW+RV E RLRK   V++N   F P RS
Sbjct: 618  LWERVIEHRLRKMTSVTQNQFGFMPGRS 645



 Score = 50.8 bits (120), Expect(2) = 7e-27
 Identities = 22/51 (43%), Positives = 36/51 (70%)
 Frame = -3

Query: 1188 YEELYKKLDSK*RSIDIYRIKKVQERRRRDLGVFRYIKDEGGRSIVNEEEL 1036
            Y++LY++LD+K    DIYR+ K++ER+ RD+   + IKDE  + +V  EE+
Sbjct: 441  YDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491



 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
 Frame = -3

Query: 642  FPIEVGLHHGLAISPYLFVFILNELS*GIQESIPWCMILRTILC*FQNRLKG*TTYLIIG 463
            FPI +GLH G A+SPYLF  +++E++  IQ  +PWCM+                      
Sbjct: 724  FPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFAD------------------- 764

Query: 462  GRH*KIMVYG*PREDRISKM*VWQE----RDSLQQRSGYMYRRPDPTSKGVFLTPRFCDT 295
                 +++    R     K+ +W++    +     RS   Y + D ++ G        D 
Sbjct: 765  ----DVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVCLDG 820

Query: 294  QV---------------REG---RRCNPPFRAAWLKWRAACGVLCDREVPLKLKGDF 178
            QV               +EG      +   +A WLKWR A GVLCD  VP KLKG F
Sbjct: 821  QVVPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKF 877