BLASTX nr result

ID: Chrysanthemum22_contig00040246 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00040246
         (1239 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH90915.1| hypothetical protein Ccrd_007032 [Cynara carduncu...    71   2e-09

>gb|KVH90915.1| hypothetical protein Ccrd_007032 [Cynara cardunculus var. scolymus]
          Length = 699

 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 49/102 (48%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
 Frame = +3

Query: 234 EKAASKAI--------ETVTNICTEQNTDANNDFMGL*VIVVKIYIMKSVNETVHHSLL- 386
           E+  SKAI        ET++NI TE + D  NDFM +     +     +VNE  H S   
Sbjct: 543 EEPTSKAISLCSTTRLETLSNIGTEHSIDTTNDFMRIRNSNSEEK-QNTVNEITHQSSTQ 601

Query: 387 IAPLMPPGINGENCRNGILKK*TP---*GICNCLKCTSFQLH 503
           I PL  PGI GEN RNGILK+ TP    G CNCL CTSF+LH
Sbjct: 602 IVPLKSPGIEGENFRNGILKR-TPRGCRGTCNCLNCTSFRLH 642


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