BLASTX nr result

ID: Chrysanthemum22_contig00039879 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039879
         (601 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023732085.1| uncharacterized protein LOC111879884 [Lactuc...    52   4e-06

>ref|XP_023732085.1| uncharacterized protein LOC111879884 [Lactuca sativa]
          Length = 211

 Score = 52.4 bits (124), Expect(2) = 4e-06
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +1

Query: 196 TQSFCPPCGTEIETLDHCFLYCSLVRKGCDSVLKWWNMGGCNFGSIDDILAHSGQNNFNN 375
           T + C  CG   ET DH  + CS  +     +LKW N+   NF ++ D L ++       
Sbjct: 82  TSTMCYHCGEVEETSDHMLIQCSYAKTIMKWILKWCNIQPENFSTVHDTLDYASNWGNCP 141

Query: 376 NKKSMCKTDSWGMIYLVW*TRNKRAFEDRR 465
            KK       +G ++ +W +RN R F ++R
Sbjct: 142 KKKRRLLGIFYGTMWSIWKSRNDRVFNNKR 171



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 12  NRSFMVKCLRDLIDDKIRPSPITHNETLWNKNVPRKICILIWRLQQRSL 158
           N ++ V  LR  +D     S +      W K +P K+   IWR +Q  +
Sbjct: 23  NGNYQVNTLRRKLDSC---SSVDIGRFEWVKEIPIKVSTFIWRAKQERI 68


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