BLASTX nr result

ID: Chrysanthemum22_contig00039874 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039874
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023735985.1| transcription factor RAX2-like [Lactuca sati...   106   4e-25
ref|XP_021980931.1| transcription factor RAX2-like [Helianthus a...   105   9e-25

>ref|XP_023735985.1| transcription factor RAX2-like [Lactuca sativa]
 gb|PLY72150.1| hypothetical protein LSAT_7X38881 [Lactuca sativa]
          Length = 249

 Score =  106 bits (264), Expect = 4e-25
 Identities = 61/121 (50%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +2

Query: 26  NVPCISPMQFSSPVFLPKQEVQDYQITNNPILDYSMMTMDYNPTMVXXXXXXXXXXXXXX 205
           +V  I+ +QFSSP  LPKQEV  YQ    PI D+SMM +DY  T +              
Sbjct: 130 SVAPINHIQFSSPTNLPKQEVDHYQTIYKPIFDHSMM-VDYQQTPMTSDSTSTSTINVNI 188

Query: 206 X--QENQGLSSNAFPLRNEYASWCSINDDGVTGSNSDTLTEGFDFRQVLGDVANFNYTTQ 379
              QEN G S NAFP+ N YASWC  N  GV  S SD LT  FDFRQV G+VANFNY + 
Sbjct: 189 LSSQENHGFSPNAFPISNGYASWCD-NGGGVIDSGSDFLTGEFDFRQVFGEVANFNYASP 247

Query: 380 W 382
           W
Sbjct: 248 W 248


>ref|XP_021980931.1| transcription factor RAX2-like [Helianthus annuus]
 gb|OTG13477.1| putative homeodomain-like protein [Helianthus annuus]
          Length = 247

 Score =  105 bits (261), Expect = 9e-25
 Identities = 55/119 (46%), Positives = 68/119 (57%)
 Frame = +2

Query: 23  NNVPCISPMQFSSPVFLPKQEVQDYQITNNPILDYSMMTMDYNPTMVXXXXXXXXXXXXX 202
           NN    S MQFSS VFLPKQEV  +QITNN   DYS+M + Y   M              
Sbjct: 128 NNNASNSAMQFSSSVFLPKQEVDQHQITNNSNFDYSIMNVSYQQQMTTSNSNSNSFNNTS 187

Query: 203 XXQENQGLSSNAFPLRNEYASWCSINDDGVTGSNSDTLTEGFDFRQVLGDVANFNYTTQ 379
             QENQ L +N F   N YASWC  ++ GV     D +T+ +DF Q++G+VANFNY+ Q
Sbjct: 188 PLQENQSLPNNVFSTANNYASWC--DNGGVMDLGGDLMTDEYDFGQMIGEVANFNYSCQ 244


Top