BLASTX nr result

ID: Chrysanthemum22_contig00039808 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039808
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021999123.1| RING-H2 finger protein ATL46-like [Helianthu...    95   7e-21
gb|KVH97803.1| hypothetical protein Ccrd_000096 [Cynara carduncu...    95   1e-20
ref|XP_023739096.1| RING-H2 finger protein ATL46-like [Lactuca s...    94   3e-20
ref|XP_022023276.1| RING-H2 finger protein ATL46-like [Helianthu...    69   3e-11
ref|XP_023740290.1| RING-H2 finger protein ATL46-like [Lactuca s...    69   4e-11
ref|XP_021997990.1| RING-H2 finger protein ATL46-like [Helianthu...    61   2e-08
ref|XP_023736302.1| RING-H2 finger protein ATL46-like [Lactuca s...    57   3e-07
ref|XP_017232716.1| PREDICTED: RING-H2 finger protein ATL46-like...    54   6e-06
ref|XP_010254259.1| PREDICTED: RING-H2 finger protein ATL46-like...    54   8e-06

>ref|XP_021999123.1| RING-H2 finger protein ATL46-like [Helianthus annuus]
          Length = 348

 Score = 95.1 bits (235), Expect = 7e-21
 Identities = 49/59 (83%), Positives = 54/59 (91%), Gaps = 2/59 (3%)
 Frame = +2

Query: 176 PTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTS--SHFQSSRFRE 346
           PT+SKTN TVLFARNIIIVIA MFFICGLLHLLV+YL+KRK+LLS S  SHFQSSRF+E
Sbjct: 21  PTNSKTNETVLFARNIIIVIAFMFFICGLLHLLVKYLIKRKKLLSLSSNSHFQSSRFQE 79


>gb|KVH97803.1| hypothetical protein Ccrd_000096 [Cynara cardunculus var. scolymus]
          Length = 379

 Score = 94.7 bits (234), Expect = 1e-20
 Identities = 48/60 (80%), Positives = 56/60 (93%), Gaps = 3/60 (5%)
 Frame = +2

Query: 179 TSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLL---STSSHFQSSRFREN 349
           ++SKT+ST LFARNIIIVIA+MFFICGLLH+LVRYLMKRKRLL   S++SHFQSSRF+EN
Sbjct: 28  SNSKTSSTFLFARNIIIVIAIMFFICGLLHILVRYLMKRKRLLLSSSSNSHFQSSRFQEN 87


>ref|XP_023739096.1| RING-H2 finger protein ATL46-like [Lactuca sativa]
 gb|PLY96920.1| hypothetical protein LSAT_4X7081 [Lactuca sativa]
          Length = 353

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 48/57 (84%), Positives = 54/57 (94%)
 Frame = +2

Query: 179 TSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQSSRFREN 349
           T SKTNST+LFARNIIIVIAVMFFICGLLHLLVRYL+KRKR  S++SHFQSSRF+E+
Sbjct: 21  TDSKTNSTLLFARNIIIVIAVMFFICGLLHLLVRYLIKRKR--SSNSHFQSSRFQES 75


>ref|XP_022023276.1| RING-H2 finger protein ATL46-like [Helianthus annuus]
 gb|OTF88179.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 492

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 7/62 (11%)
 Frame = +2

Query: 170 SNP-TSSKTNSTVLFAR--NIIIVIAVMFFICGLLHLLVRYLMKRKRLL----STSSHFQ 328
           +NP  +SK NST LF R   I+IVIAVMF ICGLLHLLV+YL+K+KRLL    S++SHFQ
Sbjct: 15  TNPHINSKNNSTFLFVRIRTIVIVIAVMFVICGLLHLLVKYLIKKKRLLLLLSSSNSHFQ 74

Query: 329 SS 334
            S
Sbjct: 75  ES 76


>ref|XP_023740290.1| RING-H2 finger protein ATL46-like [Lactuca sativa]
 gb|PLY68872.1| hypothetical protein LSAT_3X48000 [Lactuca sativa]
          Length = 333

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
 Frame = +2

Query: 170 SNPTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTS----SHFQSSR 337
           S P++ K +S+++FARN +IV+ V+F +C LLH L RYLMK+KR  S+S    SH QSSR
Sbjct: 17  SPPSNHKPHSSIIFARNSVIVLGVVFVVCCLLHFLARYLMKKKRSSSSSSSSNSHHQSSR 76

Query: 338 FREN 349
           F+E+
Sbjct: 77  FQES 80


>ref|XP_021997990.1| RING-H2 finger protein ATL46-like [Helianthus annuus]
 gb|OTG05247.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 345

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 43/53 (81%)
 Frame = +2

Query: 191 TNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQSSRFREN 349
           +NST LFA+NI+I+I VMFFICG+LH LVR+++ + R LS + H +S RF+E+
Sbjct: 23  SNST-LFAKNIVIIIVVMFFICGVLHFLVRFILNKIR-LSLNPHHESRRFQES 73


>ref|XP_023736302.1| RING-H2 finger protein ATL46-like [Lactuca sativa]
          Length = 325

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +2

Query: 191 TNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQSSRFREN 349
           TNS+V  ARNI+I++ ++F  C LLH LVR+LM + RL S + H QS+RF E+
Sbjct: 28  TNSSVFLARNIMIIVVIIFVTCCLLHFLVRFLMNKIRLYS-NFHHQSTRFHES 79


>ref|XP_017232716.1| PREDICTED: RING-H2 finger protein ATL46-like [Daucus carota subsp.
           sativus]
 gb|KZN06260.1| hypothetical protein DCAR_007097 [Daucus carota subsp. sativus]
          Length = 354

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 170 SNPTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQSSRF 340
           ++ +SSK + TVL    +I+V+AV+FFICG+LHLLVR+LM+++   ++S + QSSR+
Sbjct: 30  NSSSSSKISPTVLV---VIVVLAVLFFICGVLHLLVRFLMRKR---TSSPNSQSSRY 80


>ref|XP_010254259.1| PREDICTED: RING-H2 finger protein ATL46-like [Nelumbo nucifera]
          Length = 381

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +2

Query: 158 YLVESNPTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQSSR 337
           Y  ES P+SS ++     A  II+++AV+FFI GLLHLLVR+L+K+    S+SS  QS+R
Sbjct: 45  YQKESTPSSSTSSRISPAALFIIVILAVIFFISGLLHLLVRFLIKQP---SSSSTSQSNR 101

Query: 338 FRE 346
           + E
Sbjct: 102 YPE 104


Top