BLASTX nr result

ID: Chrysanthemum22_contig00039788 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039788
         (1198 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05375.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal ...    74   3e-10
ref|XP_023762837.1| DExH-box ATP-dependent RNA helicase DExH5, m...    71   2e-09
ref|XP_022006426.1| DExH-box ATP-dependent RNA helicase DExH5, m...    64   3e-07
ref|XP_022006425.1| DExH-box ATP-dependent RNA helicase DExH5, m...    64   3e-07

>gb|KVI05375.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal [Cynara cardunculus
            var. scolymus]
          Length = 1208

 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 35/52 (67%), Positives = 45/52 (86%)
 Frame = +2

Query: 1040 QVSLPRGLQRRVDAHLREYQSHKAKFMNGSQNSLFSKTNNNGSNATDESLFE 1195
            +VS+ +GLQRRVDAHLREY SHKA+ M GSQ++LF +T+++GS ATDE LFE
Sbjct: 205  EVSVSQGLQRRVDAHLREYLSHKARSMKGSQDNLFWRTSSSGSIATDEGLFE 256


>ref|XP_023762837.1| DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Lactuca
            sativa]
 gb|PLY86225.1| hypothetical protein LSAT_8X41921 [Lactuca sativa]
          Length = 1190

 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = +2

Query: 1040 QVSLPRGLQRRVDAHLREYQSHKAKFMNGSQNSLFSKTNNNGSNATDESLFEL 1198
            +V+LP GLQ+RVDAHL+EY S KA+ M GSQ+ L SKTN+NG+  +DE  FEL
Sbjct: 193  EVALPEGLQKRVDAHLKEYLSFKAESMKGSQDDLISKTNSNGNIGSDEGFFEL 245


>ref|XP_022006426.1| DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2
            [Helianthus annuus]
          Length = 1082

 Score = 64.3 bits (155), Expect = 3e-07
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 1040 QVSLPRGLQRRVDAHLREYQSHKAKFMNGSQNSLFSKTNNNGSNATDESLFE 1195
            +VSLP  LQ+RVDAHL EY SHKAK  NGS++SL+S T++NG+   DE LFE
Sbjct: 98   EVSLPPELQKRVDAHLEEYLSHKAKSNNGSRDSLYSTTSSNGN---DEGLFE 146


>ref|XP_022006425.1| DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
            [Helianthus annuus]
 gb|OTF99677.1| putative DEA(D/H)-box RNA helicase family protein [Helianthus annuus]
          Length = 1167

 Score = 64.3 bits (155), Expect = 3e-07
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 1040 QVSLPRGLQRRVDAHLREYQSHKAKFMNGSQNSLFSKTNNNGSNATDESLFE 1195
            +VSLP  LQ+RVDAHL EY SHKAK  NGS++SL+S T++NG+   DE LFE
Sbjct: 183  EVSLPPELQKRVDAHLEEYLSHKAKSNNGSRDSLYSTTSSNGN---DEGLFE 231


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