BLASTX nr result

ID: Chrysanthemum22_contig00039670 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039670
         (1037 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021992808.1| replication protein A 70 kDa DNA-binding sub...    63   3e-07
gb|OTG07168.1| putative nucleic acid-binding, OB-fold protein [H...    63   3e-07

>ref|XP_021992808.1| replication protein A 70 kDa DNA-binding subunit B-like [Helianthus
           annuus]
          Length = 504

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
 Frame = +2

Query: 146 RFTVIATILQIIERTPWYFLQCPDCRRKIFDNFLHA*FQPPTPEGANDYKLKQRHCSNHE 325
           +FT +A+I+   +   WY+  C  C +K+            TP+ A         C NH 
Sbjct: 263 KFTCVASIISFTQGRTWYYKGCVKCNKKL------------TPKSA------ALACENHP 304

Query: 326 HKHAI*FTIFASSD*RKFFPVCRYRFQVVISDNSGRLTLTCFSDEAHSMV-TECNKVVSE 502
                              P   Y     I+D +G  T+T F +  +S+V T C +++ +
Sbjct: 305 DVEQ---------------PKLLYCLCATIADTTGTATVTLFDEAMNSLVQTRCEELIIQ 349

Query: 503 QGHADPYTLPPVLTALQGTIHIFQLHFEMESTNEM*IYIVDTIME 637
           QG+ DPY +P  + A +G    F L F     +    YIV+ + +
Sbjct: 350 QGYTDPYVIPDKIEAFKGVTKTFHLQFNNRPQSGSSQYIVNNVSD 394


>gb|OTG07168.1| putative nucleic acid-binding, OB-fold protein [Helianthus annuus]
          Length = 538

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
 Frame = +2

Query: 146 RFTVIATILQIIERTPWYFLQCPDCRRKIFDNFLHA*FQPPTPEGANDYKLKQRHCSNHE 325
           +FT +A+I+   +   WY+  C  C +K+            TP+ A         C NH 
Sbjct: 297 KFTCVASIISFTQGRTWYYKGCVKCNKKL------------TPKSA------ALACENHP 338

Query: 326 HKHAI*FTIFASSD*RKFFPVCRYRFQVVISDNSGRLTLTCFSDEAHSMV-TECNKVVSE 502
                              P   Y     I+D +G  T+T F +  +S+V T C +++ +
Sbjct: 339 DVEQ---------------PKLLYCLCATIADTTGTATVTLFDEAMNSLVQTRCEELIIQ 383

Query: 503 QGHADPYTLPPVLTALQGTIHIFQLHFEMESTNEM*IYIVDTIME 637
           QG+ DPY +P  + A +G    F L F     +    YIV+ + +
Sbjct: 384 QGYTDPYVIPDKIEAFKGVTKTFHLQFNNRPQSGSSQYIVNNVSD 428