BLASTX nr result

ID: Chrysanthemum22_contig00039661 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039661
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022005830.1| chromodomain-helicase-DNA-binding protein 2-...    78   2e-13
gb|OTF99087.1| putative helicase [Helianthus annuus]                   78   2e-13
ref|XP_023753108.1| helicase protein MOM1-like isoform X2 [Lactu...    59   1e-06
ref|XP_023753099.1| helicase protein MOM1-like isoform X1 [Lactu...    59   1e-06

>ref|XP_022005830.1| chromodomain-helicase-DNA-binding protein 2-like [Helianthus annuus]
          Length = 1811

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 64/177 (36%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
 Frame = -1

Query: 534  IRPFTPSTSASPHNLXXXXXXXXXXXXXXXXXXXXXXXHLSPL--QTPPHLQTNHNGHPT 361
            +RPF   T ASPH+                           PL  QTPP L TNHN +PT
Sbjct: 1650 LRPFRHLTPASPHD------HRTMPSQRPSSSSSLSQTSAQPLTSQTPP-LPTNHNTNPT 1702

Query: 360  QNSPRTQPFXXXXXXXXXXXXXXXXXXXXXLYSWHSSEQHPPGSLPAMSSSLPQTSLPPM 181
            QNSPR  P                       +SWH     P G+ PA SSS  Q SLPPM
Sbjct: 1703 QNSPRGSPITSSQPVAPPASVQLSSS-----HSWH-----PLGTRPATSSSHSQVSLPPM 1752

Query: 180  PPISMSNTGLYSAPGGSLNLSQSALDLLMDIDKKAKLHQQPSTLPSQPEFSDVTEFG 10
            P +S+S++GLY           +  DL MD DK+  LH  P+T PS P  +D+ + G
Sbjct: 1753 PSVSISHSGLY---------KPTPPDLPMDNDKQDGLH-PPNTSPSPPVSTDLGKEG 1799


>gb|OTF99087.1| putative helicase [Helianthus annuus]
          Length = 1825

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 64/177 (36%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
 Frame = -1

Query: 534  IRPFTPSTSASPHNLXXXXXXXXXXXXXXXXXXXXXXXHLSPL--QTPPHLQTNHNGHPT 361
            +RPF   T ASPH+                           PL  QTPP L TNHN +PT
Sbjct: 1664 LRPFRHLTPASPHD------HRTMPSQRPSSSSSLSQTSAQPLTSQTPP-LPTNHNTNPT 1716

Query: 360  QNSPRTQPFXXXXXXXXXXXXXXXXXXXXXLYSWHSSEQHPPGSLPAMSSSLPQTSLPPM 181
            QNSPR  P                       +SWH     P G+ PA SSS  Q SLPPM
Sbjct: 1717 QNSPRGSPITSSQPVAPPASVQLSSS-----HSWH-----PLGTRPATSSSHSQVSLPPM 1766

Query: 180  PPISMSNTGLYSAPGGSLNLSQSALDLLMDIDKKAKLHQQPSTLPSQPEFSDVTEFG 10
            P +S+S++GLY           +  DL MD DK+  LH  P+T PS P  +D+ + G
Sbjct: 1767 PSVSISHSGLY---------KPTPPDLPMDNDKQDGLH-PPNTSPSPPVSTDLGKEG 1813


>ref|XP_023753108.1| helicase protein MOM1-like isoform X2 [Lactuca sativa]
          Length = 1405

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
 Frame = -1

Query: 411  PLQTPPHLQTNHNG-HPTQNSPRTQPFXXXXXXXXXXXXXXXXXXXXXLYSWHSSEQHPP 235
            PL  P    TNHN  HPTQ      P                          H+S    P
Sbjct: 1280 PLAPPSQTPTNHNNSHPTQPPSSQMPTN------------------------HNSHPAQP 1315

Query: 234  GSLPAMSSSLPQTSLPPMPPISMSNTGLYSAPGGSLNLSQSALDLLMDIDKKAKLHQQPS 55
              +       P TS   +P + +S TGLYS+   S + S   ++LLMD+DK+A  HQ+ +
Sbjct: 1316 QPVAPSEQHPPATSSSSLPSVPVSQTGLYSSSSPSPSSSGGFMNLLMDVDKEAGFHQKDN 1375

Query: 54   TLP-SQPEFSDVTEFGK 7
             LP   P  S    FGK
Sbjct: 1376 VLPMPSPSPSPSEVFGK 1392


>ref|XP_023753099.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753100.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753101.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753102.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753103.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753104.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753105.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753106.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753107.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
          Length = 1409

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
 Frame = -1

Query: 411  PLQTPPHLQTNHNG-HPTQNSPRTQPFXXXXXXXXXXXXXXXXXXXXXLYSWHSSEQHPP 235
            PL  P    TNHN  HPTQ      P                          H+S    P
Sbjct: 1284 PLAPPSQTPTNHNNSHPTQPPSSQMPTN------------------------HNSHPAQP 1319

Query: 234  GSLPAMSSSLPQTSLPPMPPISMSNTGLYSAPGGSLNLSQSALDLLMDIDKKAKLHQQPS 55
              +       P TS   +P + +S TGLYS+   S + S   ++LLMD+DK+A  HQ+ +
Sbjct: 1320 QPVAPSEQHPPATSSSSLPSVPVSQTGLYSSSSPSPSSSGGFMNLLMDVDKEAGFHQKDN 1379

Query: 54   TLP-SQPEFSDVTEFGK 7
             LP   P  S    FGK
Sbjct: 1380 VLPMPSPSPSPSEVFGK 1396


Top