BLASTX nr result

ID: Chrysanthemum22_contig00039660 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039660
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023753108.1| helicase protein MOM1-like isoform X2 [Lactu...    56   1e-06
ref|XP_023753099.1| helicase protein MOM1-like isoform X1 [Lactu...    56   1e-06

>ref|XP_023753108.1| helicase protein MOM1-like isoform X2 [Lactuca sativa]
          Length = 1405

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 30/70 (42%), Positives = 41/70 (58%)
 Frame = +3

Query: 6    MPPISMSNTGLYSAPGGSLNLSQSALDLLMDVDKKAKFYQQPNTLPSQPEFSDVTEFGKK 185
            +P + +S TGLYS+   S + S   ++LLMDVDK+A F+Q+ N LP        +E   K
Sbjct: 1333 LPSVPVSQTGLYSSSSPSPSSSGGFMNLLMDVDKEAGFHQKDNVLPMPSPSPSPSEVFGK 1392

Query: 186  SGSSDPVCLS 215
             G  D VCLS
Sbjct: 1393 CGDGDLVCLS 1402


>ref|XP_023753099.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753100.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753101.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753102.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753103.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753104.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753105.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753106.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
 ref|XP_023753107.1| helicase protein MOM1-like isoform X1 [Lactuca sativa]
          Length = 1409

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 30/70 (42%), Positives = 41/70 (58%)
 Frame = +3

Query: 6    MPPISMSNTGLYSAPGGSLNLSQSALDLLMDVDKKAKFYQQPNTLPSQPEFSDVTEFGKK 185
            +P + +S TGLYS+   S + S   ++LLMDVDK+A F+Q+ N LP        +E   K
Sbjct: 1337 LPSVPVSQTGLYSSSSPSPSSSGGFMNLLMDVDKEAGFHQKDNVLPMPSPSPSPSEVFGK 1396

Query: 186  SGSSDPVCLS 215
             G  D VCLS
Sbjct: 1397 CGDGDLVCLS 1406


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