BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039360
         (2513 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG13256.1| putative reverse transcriptase domain-containing ...  1163   0.0  
ref|XP_021991782.1| uncharacterized protein LOC110888571 [Helian...   977   0.0  
gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]     971   0.0  
gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum]     962   0.0  
gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]     953   0.0  
gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]     953   0.0  
gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]     952   0.0  
gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]     951   0.0  
gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]     933   0.0  
gb|PKU84723.1| putative mitochondrial protein [Dendrobium catena...   924   0.0  
ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprot...   910   0.0  
dbj|GAU49459.1| hypothetical protein TSUD_407480 [Trifolium subt...   909   0.0  
gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]          878   0.0  
gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhe...   876   0.0  
gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Ca...   884   0.0  
gb|PKU86468.1| RNA-directed DNA polymerase [Dendrobium catenatum]     871   0.0  
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 889   0.0  
gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   863   0.0  
gb|PNY17872.1| putative gag-pol polyprotein, partial [Trifolium ...   884   0.0  
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     892   0.0  

>gb|OTG13256.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1444

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 548/737 (74%), Positives = 630/737 (85%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFK  IG  VVVYFDDILV+S+D  QH
Sbjct: 700  KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKALIGHCVVVYFDDILVFSQDIRQH 759

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            LL L+QVF +LR+QKLYAN  KCHFL+ EV+FLGYL+S  GIRMD +K+EAIT+WPTPT+
Sbjct: 760  LLHLRQVFTILRDQKLYANRAKCHFLSPEVLFLGYLISENGIRMDESKVEAITAWPTPTS 819

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            IH++RSFHGLASFYRRFI+NFSS +AP+T C+KG  F WT  A  AF ELK+RVTQAPVL
Sbjct: 820  IHEVRSFHGLASFYRRFIKNFSSIVAPITNCLKGNNFAWTPAATIAFEELKKRVTQAPVL 879

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
            ALPNF   FQVECDASG GIGGVLSQ  RPIAFFSEK +EA++KYSTYDKEFYAI+RSL+
Sbjct: 880  ALPNFQLPFQVECDASGFGIGGVLSQANRPIAFFSEKLSEAKQKYSTYDKEFYAIIRSLE 939

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            YWRHYLL  EFVL+SDH+AL++INGQHKL+PRHAKWVE+LQ +SF IRHKAG++N VADA
Sbjct: 940  YWRHYLLPGEFVLYSDHQALRFINGQHKLNPRHAKWVEYLQEFSFVIRHKAGTSNTVADA 999

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR  L +SLQ+QV GFD FR LY +DPDF   W SC T P + +S Q+G+LF+  ++C
Sbjct: 1000 LSRRRALLTSLQLQVEGFDIFRGLYVDDPDFSEAWKSCQTAPTKGYSVQDGFLFRSNQLC 1059

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            +P CSLRD+IILESH GGLAGHFGR KTL  ++ RFYWPKM  D++R+I RCR CHVAKT
Sbjct: 1060 VPKCSLRDAIILESHQGGLAGHFGRGKTLKFVQERFYWPKMSTDVARVIDRCRTCHVAKT 1119

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
            QH+NAGLYTPLPVP  PWEDVSLDFV+GLPRTQR KDSIMVVVDRFSKM+HFVPCSKTYD
Sbjct: 1120 QHSNAGLYTPLPVPNGPWEDVSLDFVVGLPRTQRQKDSIMVVVDRFSKMSHFVPCSKTYD 1179

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            ASQVARLYFAEIV+LHGVPK+LTSDRDVKFV HFWRTLW R+GS+L FSS+HHPQ+DGQT
Sbjct: 1180 ASQVARLYFAEIVKLHGVPKSLTSDRDVKFVGHFWRTLWKRLGSRLHFSSAHHPQSDGQT 1239

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            EVTNRSLGNLLRSLVG+N +QWD+ LPQAEFAYNRS +R+TG SPF +VYGR P TPLDL
Sbjct: 1240 EVTNRSLGNLLRSLVGNNPRQWDIVLPQAEFAYNRSTHRSTGMSPFLVVYGRNPFTPLDL 1299

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
            AP+P  E  SVEG ++SAQIK +H QVR+ I  +   YQ +AN HR++V++ EGDLVWIH
Sbjct: 1300 APLPTTEHFSVEGEERSAQIKMIHKQVREQIENNNIVYQRRANVHRRRVVFNEGDLVWIH 1359

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGDSD 2162
            L K RFP GRFGKLQ RADGPFRVLKRINDNAYKI+LPGHYNVSATFNVADLSP+  + D
Sbjct: 1360 LSKARFPGGRFGKLQPRADGPFRVLKRINDNAYKIDLPGHYNVSATFNVADLSPFVPEED 1419

Query: 2163 DDLKSGVPLFQDGEDDA 2213
            D   S    F++GE+DA
Sbjct: 1420 DPFDSRASPFEEGENDA 1436


>ref|XP_021991782.1| uncharacterized protein LOC110888571 [Helianthus annuus]
          Length = 1323

 Score =  977 bits (2526), Expect = 0.0
 Identities = 467/690 (67%), Positives = 554/690 (80%)
 Frame = +3

Query: 132  VVYFDDILVYSRDTAQHLLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIR 311
            VVYFDDILV+S D  QHLL L+QVF +LR+QKLYAN++KCHFL++EV+FLGYL+S  GIR
Sbjct: 584  VVYFDDILVFSPDLQQHLLHLRQVFLILRDQKLYANSEKCHFLSSEVLFLGYLISGNGIR 643

Query: 312  MDATKIEAITSWPTPTTIHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEA 491
            MD +KIEAI +WPTPTT+ ++RSFHGLASFYRRFIRNFS+ +AP+T+ +KG  F+WT  A
Sbjct: 644  MDESKIEAILTWPTPTTLFEVRSFHGLASFYRRFIRNFSAIVAPITDFLKGKTFQWTPAA 703

Query: 492  DKAFAELKQRVTQAPVLALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARR 671
             KAF  LK+ VTQAPVLALPNF   FQVECDASG  +GGVLSQ+ RPIAFFSEK +EA++
Sbjct: 704  AKAFDCLKKCVTQAPVLALPNFQKAFQVECDASGFRVGGVLSQDGRPIAFFSEKLSEAKQ 763

Query: 672  KYSTYDKEFYAIVRSLDYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAY 851
            K+STYDKE YAIVRSL+YWRHYL+ AEF+LFSDH+AL+YI                 Q +
Sbjct: 764  KFSTYDKECYAIVRSLEYWRHYLIHAEFILFSDHQALRYI-----------------QEF 806

Query: 852  SFTIRHKAGSANVVADALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPF 1031
            SF IRHK+G+ N VADALSRR  L +SLQ++V  FD F  LY +DPDF  +W++C   P 
Sbjct: 807  SFVIRHKSGATNTVADALSRRRALLTSLQVRVEWFDNFCALYPDDPDFAELWNTCRVAPT 866

Query: 1032 RDFSKQNGYLFKGRRVCIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMER 1211
               S Q+G+LF G R+C+P CSLRDSIILE H G LAGHFGRDKTL LI+ RF+WPKM  
Sbjct: 867  LGHSLQDGFLFNGTRLCVPKCSLRDSIILEGHQGALAGHFGRDKTLKLIKERFFWPKMGA 926

Query: 1212 DISRIIARCRVCHVAKTQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVV 1391
            D++RI+ RC  CH+AKT  +NAGLYTPLPVP  PWEDVSLDFV+GLPRTQR KDSIMVVV
Sbjct: 927  DVNRIVDRCHTCHIAKTHKSNAGLYTPLPVPEGPWEDVSLDFVVGLPRTQRQKDSIMVVV 986

Query: 1392 DRFSKMAHFVPCSKTYDASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMG 1571
            DRFSKMAHF+PC+KTYDASQ+ARLYF E+VRLHG+P++LTSDRDVKFV HFWRTLW ++G
Sbjct: 987  DRFSKMAHFIPCAKTYDASQIARLYFEEVVRLHGIPRSLTSDRDVKFVGHFWRTLWKKLG 1046

Query: 1572 SKLQFSSSHHPQTDGQTEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGR 1751
            S L FSS+HHPQ+DGQTEVTNRSLGNLLRSLVG N KQWDL L QAEFAYNRS +R+TG 
Sbjct: 1047 SSLNFSSAHHPQSDGQTEVTNRSLGNLLRSLVGSNPKQWDLVLAQAEFAYNRSSHRSTGM 1106

Query: 1752 SPFFIVYGREPITPLDLAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQAN 1931
            SPF +VY R P TPLDLAP P +E  SVEG +++ QIK +H QVR+ I+ H   YQ +AN
Sbjct: 1107 SPFLVVYCRNPFTPLDLAPSPTVEHYSVEGDERANQIKSIHEQVRNAIVNHNLVYQRRAN 1166

Query: 1932 THRKQVLYKEGDLVWIHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNV 2111
              RKQV+++ GDLVW+HL KERFP G+  KL  RADGPFRVL+RINDNAYKIELPGHYNV
Sbjct: 1167 EKRKQVVFQAGDLVWVHLSKERFPGGKASKLNPRADGPFRVLERINDNAYKIELPGHYNV 1226

Query: 2112 SATFNVADLSPYEGDSDDDLKSGVPLFQDG 2201
            SATFNVADLSP+  + DD   S     ++G
Sbjct: 1227 SATFNVADLSPFVAELDDPFDSRTSPSEEG 1256


>gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1277

 Score =  971 bits (2511), Expect = 0.0
 Identities = 456/715 (63%), Positives = 562/715 (78%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFK RDGL+EW+VMPFGLSNAPSTFMRLMN +F+PF+ +FV++YFDDILVYS D   H
Sbjct: 552  KTAFKVRDGLFEWLVMPFGLSNAPSTFMRLMNQIFQPFLCKFVIIYFDDILVYSSDCHSH 611

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+QVF VL+EQ+LY + +KCHFL   + FLG+++S  GI +D  KIEAI SWPTP +
Sbjct: 612  LQHLRQVFQVLKEQRLYCHPQKCHFLGKRIKFLGFILSVAGIEVDPEKIEAIVSWPTPQS 671

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
              D+R FHGLASFYRRFI+NFS+  AP+TE +K  KF WTKEA+ +F  LK++VT  PVL
Sbjct: 672  FTDVRRFHGLASFYRRFIQNFSTLAAPLTELLKTDKFLWTKEAEFSFEHLKEKVTTTPVL 731

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+F+ +FQV+CDAS +GIG VLSQ  +P+A+FSEK N++R+KYSTYDKEFYAIVR+L 
Sbjct: 732  RLPDFNKLFQVDCDASNVGIGAVLSQEDQPVAYFSEKLNDSRQKYSTYDKEFYAIVRALH 791

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLLS EF+LF+DH ALK++N Q KL  RHA W E L A+ F ++HK+G  N VADA
Sbjct: 792  HWSHYLLSKEFILFTDHAALKFLNSQKKLRGRHAMWAESLAAFHFVLKHKSGKQNQVADA 851

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRRHVL   +Q ++ GFD  R++Y ED DFR IW  C +  ++ +  ++G+LF    +C
Sbjct: 852  LSRRHVLVQEIQAKLTGFDYIREMYAEDVDFRDIWEKCQSQAYQFYQIRDGFLFFHNCIC 911

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            +P  S+R ++I E H GGLAGHFGRDKTLAL++ +FYWP M +D+ R +  CR+C  AKT
Sbjct: 912  VPRGSIRIALISECHDGGLAGHFGRDKTLALVKEKFYWPAMPKDVGRYVKGCRICRQAKT 971

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
              TNAGLY PLPVP  PWEDVS+DFV+GLPRTQR+KDSIMVVVDRFSKMAHFV C+KT D
Sbjct: 972  TGTNAGLYLPLPVPQNPWEDVSMDFVLGLPRTQRNKDSIMVVVDRFSKMAHFVACNKTLD 1031

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            A+ +  LYF EIVRLHG+PKT+TSDRDVKF+SHFW+TLW ++G++LQFSS  HPQTDGQT
Sbjct: 1032 ATHIGDLYFQEIVRLHGIPKTITSDRDVKFLSHFWKTLWGKLGTRLQFSSVAHPQTDGQT 1091

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG NL+QWDL L Q EFA+NRS N TT RSPF IVYG  P+TPLDL
Sbjct: 1092 ENVNRSLGNLLRCFVGKNLRQWDLILGQVEFAFNRSPNNTTRRSPFEIVYGSNPLTPLDL 1151

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             PI      S++G  +S +IKELH QV+  IIK   KYQ +AN HRK V + EGDLVWI 
Sbjct: 1152 IPILNSSSYSLDGEQRSIEIKELHKQVQAEIIKQNSKYQTRANKHRKSVQFNEGDLVWIR 1211

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
            LRKERFP G FGKL+ +A+GPFRV+K+INDNAY+I+LPG YNVSA FNVADL+P+
Sbjct: 1212 LRKERFPPGSFGKLKPKAEGPFRVIKKINDNAYQIDLPGDYNVSAVFNVADLTPH 1266


>gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1268

 Score =  962 bits (2486), Expect = 0.0
 Identities = 445/715 (62%), Positives = 557/715 (77%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFK RDGLYEW+VM FGLSNAPSTFMRLMN +F+PF+ +FV+VYFDDILVYS D   H
Sbjct: 542  KTAFKVRDGLYEWLVMSFGLSNAPSTFMRLMNQIFQPFLSKFVIVYFDDILVYSPDVQSH 601

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+ VF +L+EQKLY + KKC FL   + FLG++VSAEG+ +D+ K+EAI SWP P +
Sbjct: 602  LQHLRHVFQILKEQKLYCHKKKCQFLDQRIRFLGFIVSAEGVEVDSDKVEAILSWPNPCS 661

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
              D+R FHGLASFYRRFI NFS+  A +TE +K     WT  A  +F ELK+ +T APVL
Sbjct: 662  FTDVRRFHGLASFYRRFIANFSTIAALLTELLKEDSSHWTAAAQLSFDELKKNMTSAPVL 721

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+F  +FQV+CDAS +G+G VLSQ  RP+A+FSEK NE R++YSTYDKEFYAIVR+L 
Sbjct: 722  RLPDFSKIFQVDCDASNVGVGAVLSQEGRPVAYFSEKLNETRQRYSTYDKEFYAIVRALH 781

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL  EFVLF+DH ALK+I  Q KL  RHA W EFL A+ F ++HK+G+ N VADA
Sbjct: 782  HWSHYLLPKEFVLFTDHAALKFIESQKKLKGRHASWSEFLAAFQFVLQHKSGTLNQVADA 841

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR++L  +L  ++ GF+T RDLY  D DF+ +W  C  +P + F ++ GYLF G R+C
Sbjct: 842  LSRRYILLQALHTRLTGFETIRDLYATDTDFKEVWVLCQDSPHKLFHRKEGYLFLGTRIC 901

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP CS+R +++ E H GG++GHFGRDKTL L++ RF+WP M+RD+ R +  C+VC  AKT
Sbjct: 902  IPNCSVRLALVAECHDGGMSGHFGRDKTLTLLKERFHWPSMQRDVLRYVQSCQVCKRAKT 961

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
              TNAGLY+PLPVP  PWEDVS+DF++GLPRTQR+KDS+MV+VDRFSKMAHFV C+KT D
Sbjct: 962  SLTNAGLYSPLPVPVGPWEDVSMDFILGLPRTQRNKDSVMVIVDRFSKMAHFVACNKTMD 1021

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            A+ +A LYF E+VRLHG+PKT+TSDRDVKF+SHFWRTLW+++ ++LQ+SS+ HPQTDGQT
Sbjct: 1022 ATHIADLYFKEVVRLHGIPKTITSDRDVKFLSHFWRTLWSKLCTRLQYSSTAHPQTDGQT 1081

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  +G ++KQWDL L Q EFA+NRS N+TTG  PF IVYG  P+TPLDL
Sbjct: 1082 ETINRSLGNLLRCFIGKHIKQWDLILAQVEFAFNRSTNQTTGHIPFEIVYGTNPLTPLDL 1141

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             P   +  +S EG  +S +IK+LH QVR+ I+K   KYQ QAN HRK   ++ GD VWI 
Sbjct: 1142 MPSATLTAVSKEGEQRSKEIKKLHQQVREHIVKQNTKYQKQANKHRKLQQFQVGDKVWIK 1201

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
            LRKERFP G FGKL+ +ADGPFR+ KRINDNAY+I+LPG YNVSA FNVADL+P+
Sbjct: 1202 LRKERFPPGSFGKLKPKADGPFRITKRINDNAYEIDLPGDYNVSAVFNVADLTPH 1256


>gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 944

 Score =  953 bits (2464), Expect = 0.0
 Identities = 456/720 (63%), Positives = 565/720 (78%), Gaps = 1/720 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFK RDGLYEW VMPFGLSNAPSTF RLMN VF+PF+ +FVVVYFDDIL++S +  +H
Sbjct: 219  KTAFKVRDGLYEWTVMPFGLSNAPSTFTRLMNQVFQPFLCKFVVVYFDDILIFSENIEEH 278

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  ++ V C LREQKLY +  K  FL +++ FL ++VS  GI  D  KIEAI SWPTP +
Sbjct: 279  LQHIRLVLCKLREQKLYGHIGKSKFLDSKIEFLCFVVSVSGIEADPRKIEAIVSWPTPQS 338

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
              ++R FHGLASFYRRFI+NFSS  AP+TE +K   F W+  A  +F  LK+ VT +PVL
Sbjct: 339  FTEVRRFHGLASFYRRFIKNFSSIAAPITESLKSESFVWSSSAQSSFELLKKAVTTSPVL 398

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+F+ VF+VECDAS +GIG VLSQ+  PIAFFSEK NEAR+KYSTYDKEFYA+VR+L 
Sbjct: 399  NLPDFNKVFEVECDASNVGIGAVLSQDGHPIAFFSEKLNEARQKYSTYDKEFYALVRALH 458

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL+ +FVL++DHEAL+Y+N Q KL  RHA W EFL ++++ I+HKAG  N  ADA
Sbjct: 459  HWNHYLLAKDFVLYTDHEALRYLNSQKKLKGRHAAWSEFLASFNYVIKHKAGHLNQAADA 518

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSR H+L  +LQ +V G + F+DLY  D DF+ IW+ C   P++ F  ++GYLF G  +C
Sbjct: 519  LSRCHLLLQTLQTKVLGMENFKDLYSVDADFKLIWNQCLHQPYKLFHIKDGYLFHGHSLC 578

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP  S R +II E H GGL GHFGRDKTL LI+ +FYWP + RD+ R +  CRVC +AKT
Sbjct: 579  IPRGSNRLAIITEFHEGGLMGHFGRDKTLNLIQEKFYWPLLSRDVGRYVQGCRVCRMAKT 638

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
            Q TNAGLY+PLPVP APWEDVSLDFV+GLPRTQR+KDSIMVVV+RFSKMAHFV C KT D
Sbjct: 639  QGTNAGLYSPLPVPKAPWEDVSLDFVLGLPRTQRNKDSIMVVVNRFSKMAHFVACHKTLD 698

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            AS +A LY  EIVR++G+P T+TSDRD+KF+S+FW+TLW+++G++LQ+SS+ HPQTDGQT
Sbjct: 699  ASHIANLYLKEIVRIYGIPMTITSDRDIKFMSYFWKTLWSKLGTRLQYSSAAHPQTDGQT 758

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            EV NRSLGNLLR  V  N+KQWDL L Q EFA+NRS+N++T RSPF IVYGR P+TPLDL
Sbjct: 759  EVVNRSLGNLLRCFVRRNIKQWDLILAQIEFAFNRSVNQSTRRSPFEIVYGRNPLTPLDL 818

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             PI      +++G  +S +I++LH QV+D IIK  EKY+AQAN HRK+V+Y+EGDLVWI 
Sbjct: 819  IPIVQQTAYNLDGEQRSKEIQKLHQQVQDEIIKQNEKYRAQANRHRKKVIYQEGDLVWIR 878

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSP-YEGDS 2159
            LRKERFPA  F KL+ RADGPFRV+KRINDNAY I+LPG YN+ A FNVADL+P YE ++
Sbjct: 879  LRKERFPAKAFSKLKPRADGPFRVVKRINDNAYLIDLPGDYNILAVFNVADLTPHYENEA 938


>gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1164

 Score =  953 bits (2463), Expect = 0.0
 Identities = 442/715 (61%), Positives = 557/715 (77%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFK RDGLYEW+VMPFGLSNAPSTFMRLMN +F+P +   V+VYFDDIL+YS+D   H
Sbjct: 429  KTAFKVRDGLYEWLVMPFGLSNAPSTFMRLMNQIFQPLLSHCVIVYFDDILIYSKDLQSH 488

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  L+QV  +L+EQ+LY + +KCHFL + + FLG+++SAEGI +D  KI AI +WP P +
Sbjct: 489  MQHLKQVLQILKEQRLYCHPRKCHFLDSWIQFLGFILSAEGIEVDPEKIRAIVTWPIPCS 548

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
              D+R FHGLASFYRRFI  FS+  AP+TE +K   F W +EA  +F ELK+++T  PVL
Sbjct: 549  FTDVRRFHGLASFYRRFIARFSTIAAPLTELLKASTFCWNQEAQGSFDELKRQMTSTPVL 608

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+FD +FQVECDAS +GIG VLSQ  +PIA+FSEK NE R++YSTYDKEFYAIVR+L 
Sbjct: 609  RLPDFDKLFQVECDASNIGIGAVLSQEGKPIAYFSEKLNEVRQRYSTYDKEFYAIVRTLH 668

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL  EF+LF+DH ALK+++ + KL  RHA W EFL A+ F ++HK+G  N VADA
Sbjct: 669  HWSHYLLCKEFILFTDHAALKFLDSKKKLRGRHATWAEFLSAFQFVLKHKSGKDNQVADA 728

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR+ L  ++Q Q+ GFD  +++Y  DPDF  IW  C   P++ F  +  +LFK   +C
Sbjct: 729  LSRRYALLQTVQAQLVGFDAIKEMYAADPDFGEIWRKCQQAPYQLFYLKEDFLFKSLSIC 788

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP CSLR ++I E H GGL+GHFGRDKTL L R +F+WP ++RD++R I  C+VC  AKT
Sbjct: 789  IPDCSLRLAVIAECHDGGLSGHFGRDKTLFLTREKFFWPNIKRDVTRYIRSCQVCRRAKT 848

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
              TNAGLY+PLP+P  PW+DVS+DFV+GLPRTQR+KDSIMVVVDRFSKM+HF+ C KT D
Sbjct: 849  TLTNAGLYSPLPIPLRPWDDVSMDFVVGLPRTQRNKDSIMVVVDRFSKMSHFIACHKTLD 908

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            A+ ++ LYF EIVRLHG+P+T+ SDRDVKF+SHFWRTLW ++G++LQFSS+ HPQTDGQT
Sbjct: 909  ATHISDLYFKEIVRLHGIPRTIVSDRDVKFLSHFWRTLWGKLGTRLQFSSAAHPQTDGQT 968

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG NLKQWDL LPQ EFA+NRSIN+TTG +PF +VYG  P+TPLDL
Sbjct: 969  ETVNRSLGNLLRCFVGKNLKQWDLVLPQIEFAFNRSINQTTGHTPFELVYGNNPLTPLDL 1028

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             P   +   S +G  +S +IK+LH QVRD I +   +YQ QAN HR+ V+++ GD+VWI 
Sbjct: 1029 LPALSVSVYSQDGERRSEEIKKLHQQVRDKIAQQNTRYQKQANKHRRSVVFQVGDMVWIK 1088

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
            LRKERFP G FGKL+ +ADGPFR LKRINDNAY+IELPG YNVSA FNV+DL+P+
Sbjct: 1089 LRKERFPPGPFGKLKPKADGPFRGLKRINDNAYEIELPGDYNVSAVFNVSDLTPH 1143


>gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1207

 Score =  952 bits (2460), Expect = 0.0
 Identities = 441/715 (61%), Positives = 555/715 (77%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT++GLYEW VMPFG+SNAPSTFMRLMN +F+P I + VVVYFDDIL+YS     H
Sbjct: 482  KTAFKTKEGLYEWTVMPFGVSNAPSTFMRLMNQIFQPLINKCVVVYFDDILIYSTTLESH 541

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            LL L+ VF +LR Q+L+ + KKC +L N + FLG+++SAEG+  D  K+EAI  WP P T
Sbjct: 542  LLHLRDVFEILRTQRLFVHPKKCQYLTNSISFLGFIISAEGVNADPAKVEAIIQWPIPQT 601

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            I ++R FHGLASFYRRFI+NFS+  AP+TE +KG +F WT EAD  F +LKQ ++ APVL
Sbjct: 602  ITEVRQFHGLASFYRRFIQNFSTIAAPITELLKGDRFVWTAEADNRFKQLKQVISTAPVL 661

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
            ALPNF++VF+V+CDAS +GIG VLSQ   PIAFFSEK N+ R+KYS YDKEFYA+V++L 
Sbjct: 662  ALPNFNEVFEVDCDASNVGIGAVLSQRGHPIAFFSEKLNDVRQKYSVYDKEFYAVVQALR 721

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL  EF+LF+DHEAL+++N Q KL  RHA WVE+L A+ F ++HK+G  N VADA
Sbjct: 722  HWEHYLLPHEFILFTDHEALRFLNTQQKLKGRHAAWVEYLGAFHFVLKHKSGKLNQVADA 781

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR +L  +LQ +V GF+  ++LY +DPDF  +WS C  TP++ + +Q  +LF G R+C
Sbjct: 782  LSRRVILLQTLQTKVTGFEILKELYPQDPDFGELWSKCLETPYKFYHRQQEHLFYGNRLC 841

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            +P  S R  II E H   +AGHFGRDKTLAL++  F+WP + RD+ R I RCR+C +AKT
Sbjct: 842  VPQGSTRLVIIRECHESSIAGHFGRDKTLALVQEHFFWPSLNRDVDRFIKRCRICVIAKT 901

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
            Q    GLY PLPVP  PW DVSLDFV+GLPRTQR+KDSIMVVVDRFSKM+HF+ C+KT D
Sbjct: 902  QSKKLGLYIPLPVPDGPWTDVSLDFVLGLPRTQRNKDSIMVVVDRFSKMSHFIACNKTLD 961

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            AS +A LYF EIVRLHG+P+T+TSDRDVKF+SHFWRTLW ++G+KLQFSS+ HPQTDGQT
Sbjct: 962  ASHIADLYFKEIVRLHGIPRTITSDRDVKFLSHFWRTLWAKLGTKLQFSSTAHPQTDGQT 1021

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG NLK WDL LPQ EFA+NRS+++ TG SPF + YG  P++PLDL
Sbjct: 1022 ETVNRSLGNLLRCFVGKNLKSWDLILPQVEFAFNRSVSQATGHSPFQVAYGCVPLSPLDL 1081

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             P    +R S +GA +S +++ LH +V++ I KH +K Q QAN  R+ V ++EGD VWI 
Sbjct: 1082 IPQVQTDRYSEDGAIRSQEVQNLHRKVKELITKHNDKCQKQANRKRRDVKFQEGDRVWIR 1141

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
            LRKERFP G FGKL+ +ADGPFRV++++ DNAY+IELP  YNVSATFNVA L PY
Sbjct: 1142 LRKERFPPGAFGKLKPKADGPFRVVRKLGDNAYQIELPSEYNVSATFNVAYLVPY 1196


>gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1278

 Score =  951 bits (2457), Expect = 0.0
 Identities = 455/743 (61%), Positives = 567/743 (76%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFK RDGL+EWMVMPFGLSNAPSTFMRLMN +F+ ++G+FV+VYFDDILVYS D   H
Sbjct: 541  KTAFKVRDGLFEWMVMPFGLSNAPSTFMRLMNQIFQSYLGKFVIVYFDDILVYSPDFRSH 600

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+QV  +LR+Q LY + KKC FL +++ FLG+++SA GI +D  K+ AI SWP P +
Sbjct: 601  LQHLRQVMEILRQQTLYCHPKKCQFLNHKIQFLGFVLSANGIEVDPEKVTAIVSWPVPHS 660

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            + D+R FHGLASFYRRFI NFS+  APMTE +K   F WTK A  +F +LK+++T APVL
Sbjct: 661  LTDVRRFHGLASFYRRFIANFSTVAAPMTELLKSDSFCWTKTAQNSFEQLKEKMTTAPVL 720

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+F +VFQV+CDAS +GIG VLSQ  +P+A+FSEK NEAR+KYSTYDKEFYAIVR+L 
Sbjct: 721  RLPDFHNVFQVDCDASNVGIGAVLSQEGQPVAYFSEKLNEARQKYSTYDKEFYAIVRALH 780

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL  EFVLF+DH ALK+++ Q KL  RHA W E L A+ F ++HK+G  N VADA
Sbjct: 781  HWSHYLLCREFVLFTDHAALKFLDSQKKLRGRHATWSESLAAFQFVLKHKSGKLNQVADA 840

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRRHVL   LQ +V GF+  +++Y  D DF+ +W  C  +    +  ++G+LF    +C
Sbjct: 841  LSRRHVLLQVLQSKVIGFENIKEMYATDVDFQGVWKLCQDSSHLQYHIKDGFLFFRTCLC 900

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP  S+R  +I E H  G+AGHFGRDKTL+LI+ +FYWP + +D++R +  CR+C  AKT
Sbjct: 901  IPRGSIRLVLISECHDSGMAGHFGRDKTLSLIKEKFYWPAIHKDVNRYVRGCRICKRAKT 960

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
              TNAGLY PLPVP+ PWEDVS+DFV+GLP TQR+KDSIMVVVDRFSKMAHFV C+KT D
Sbjct: 961  PGTNAGLYLPLPVPSGPWEDVSMDFVLGLPHTQRNKDSIMVVVDRFSKMAHFVACNKTLD 1020

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            A+ +  LYF EIVRLHG+PKT+TSDRDVKF+SHFW+TLW ++G++LQFSS  HPQTDGQT
Sbjct: 1021 ATHIGDLYFREIVRLHGIPKTITSDRDVKFLSHFWKTLWGKLGTRLQFSSVAHPQTDGQT 1080

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG N++QWDL L Q EFA+NRSIN TTGRSPF IVYG  P++P+DL
Sbjct: 1081 ETINRSLGNLLRCFVGKNVRQWDLILAQVEFAFNRSINHTTGRSPFEIVYGHNPLSPIDL 1140

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             PI  +   S +G  +S +IK LH QV++ I +   KYQ QAN HRK V +KEGDLVWI 
Sbjct: 1141 IPIANVSAYSTDGEQRSVEIKNLHKQVQEEIARQNAKYQRQANKHRKFVQFKEGDLVWIR 1200

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGDSD 2162
            LRKERFP G FGKL+ +ADGPFR+LK+INDNAY+I+LPG YNVSA FNVADL+P+     
Sbjct: 1201 LRKERFPPGPFGKLKPKADGPFRILKKINDNAYQIDLPGDYNVSAVFNVADLTPHY---- 1256

Query: 2163 DDLKSGVPLFQDGEDDAGASHAT 2231
             D++   P      DDAGA+  T
Sbjct: 1257 -DIEESSP---PRLDDAGATEQT 1275


>gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1459

 Score =  933 bits (2411), Expect = 0.0
 Identities = 441/751 (58%), Positives = 567/751 (75%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKTRDGLYEW VMPFGLSNAPSTFMRLMN VF+ ++ +F+V+YFDDIL+YS++  +H
Sbjct: 711  KTAFKTRDGLYEWTVMPFGLSNAPSTFMRLMNQVFRSYLNKFLVIYFDDILIYSQNMEEH 770

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+QVF VL EQ L+AN  KC FL + + FLG+++S  G+ MD  K++AI  WPTPT+
Sbjct: 771  LQHLKQVFLVLLEQHLFANTTKCEFLVDTIKFLGFVISPTGLEMDFDKVKAIHGWPTPTS 830

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            I+D+R FHGLASFYRRFI+NFS   AP+TE +K  +F+WTK A ++F +LK  + +APVL
Sbjct: 831  INDVRRFHGLASFYRRFIQNFSMVAAPLTEILKRPQFEWTKAAQESFDQLKDLMQRAPVL 890

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LPNF  VF+VECDAS  GIG VLSQ   P+A+FSEK NE+R+KYS YDKEFYAIVR+L 
Sbjct: 891  TLPNFSKVFEVECDASQNGIGAVLSQEGHPVAYFSEKLNESRQKYSIYDKEFYAIVRALQ 950

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            YW HYLL  EF+LF+DH++LK++  Q KL+ RHAKWVE+L ++ +++++K+G+ N VADA
Sbjct: 951  YWSHYLLGQEFILFTDHQSLKHLQYQSKLNTRHAKWVEYLSSFHYSLKYKSGTTNQVADA 1010

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRRH+L ++LQ++  GF+  +DLY++DPDF  IW  C   P++ F  +  YLFKG ++C
Sbjct: 1011 LSRRHMLLNTLQVKTVGFEIIKDLYEKDPDFAKIWQLCLLKPYKFFHLEQKYLFKGNKLC 1070

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP  SLR++II E+H GGLAGHFGRDKTLALI   FYWP +E+D++R I RC +C +AKT
Sbjct: 1071 IPQGSLREAIIFENHNGGLAGHFGRDKTLALIHENFYWPSLEKDVTRHIKRCHICKMAKT 1130

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
               N GLY PLPVP +PW DVS+DFV+GLP TQR  D+IMVVVDRFSKMAHF+PC KT D
Sbjct: 1131 TQHNTGLYLPLPVPESPWIDVSMDFVLGLPITQRKNDAIMVVVDRFSKMAHFIPCHKTSD 1190

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            AS +ARLYF E+VRLHG+PKT+TSDRDVKF+SHFWRTLW+++G+KLQFSS+ HPQTDGQT
Sbjct: 1191 ASHIARLYFHEVVRLHGIPKTITSDRDVKFLSHFWRTLWSKLGTKLQFSSTAHPQTDGQT 1250

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG +++ WD  L Q EFAYN+S N+TTGRSPF IVYG+ P  PL+L
Sbjct: 1251 ESVNRSLGNLLRCFVGKSIRSWDEILGQVEFAYNKSRNQTTGRSPFEIVYGQNPTGPLEL 1310

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             P+      S++   +  +I++LH Q++  I K   KYQ QAN  R+   +KEGDLVWI 
Sbjct: 1311 TPLLSSTAHSLDADTRVKEIQQLHKQIQQHIQKQNTKYQQQANKSRRGETFKEGDLVWIR 1370

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGDSD 2162
            L KERFP  R+ KLQ +A GPFR+L+RINDNA++IEL  +  +S  FN++DLS +     
Sbjct: 1371 LSKERFPNRRYNKLQPKAKGPFRILRRINDNAFQIELLDNLQISPVFNISDLSHH----- 1425

Query: 2163 DDLKSGVPLFQDGEDDAGASHATNNLVEYLE 2255
                  + L    ED A    A N   E++E
Sbjct: 1426 ----YPMELTDQAEDIAQPQQANNGHTEHVE 1452


>gb|PKU84723.1| putative mitochondrial protein [Dendrobium catenatum]
          Length = 1067

 Score =  924 bits (2388), Expect = 0.0
 Identities = 436/715 (60%), Positives = 543/715 (75%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKTR+GLYEW VMPFG+SNAPSTFMRLMN VF+P + + VV+YFDDILVYS     H
Sbjct: 342  KTAFKTREGLYEWTVMPFGVSNAPSTFMRLMNQVFRPLMNKCVVIYFDDILVYSSSVDLH 401

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+ V  +LREQ+L+AN KKC +L +++ FLG+++S+ GI  D  KIEAI  WPTP +
Sbjct: 402  LEHLRSVLDLLREQQLFANPKKCQYLTDKISFLGFIISSAGIEADPHKIEAIVQWPTPRS 461

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            + ++R FHGLASFYRRFIRNFSS  AP+TE +K   F+W   A + F  LK+ ++ APVL
Sbjct: 462  MTEVRQFHGLASFYRRFIRNFSSVAAPLTELLKSEPFQWNPSAKEGFERLKEAISTAPVL 521

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
            ALP+F+  F+++CDAS +GIG VLSQ+  PIAFFSEKFN++RRKYS YDKE YA+VR+L 
Sbjct: 522  ALPDFNKAFEIDCDASNVGIGAVLSQHGHPIAFFSEKFNDSRRKYSVYDKELYAVVRALH 581

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYLL  EF+L+SDHEAL ++N Q KL  RHA WVEFL A+ + ++HK+G  N VADA
Sbjct: 582  HWSHYLLPHEFILYSDHEALCFLNSQKKLKGRHAAWVEFLGAFHYVLKHKSGKCNQVADA 641

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR  L   LQ +V  F+  ++LY  D DF  IWS C   P++ +  Q G+LF G ++C
Sbjct: 642  LSRRTALIQVLQTKVIEFELLKELYPADSDFGEIWSKCQEKPYKLYHCQQGHLFHGNKLC 701

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP  S R +II E H   +A HFGRDKTLALI+  F+WP + RD+ R + RCRVC +AKT
Sbjct: 702  IPQGSTRLAIIRECHESSIADHFGRDKTLALIQEHFFWPLLSRDVDRFLRRCRVCVLAKT 761

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
                 GLYTPLPVP  PW +VSLDFV+GLPRTQR+KDSIMVVVDRFSKM HF+ C+KT D
Sbjct: 762  HSQKLGLYTPLPVPEGPWLEVSLDFVLGLPRTQRNKDSIMVVVDRFSKMTHFIACNKTLD 821

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            AS VA LYF EIVRLHG+PKT+TSDRDVKF+SHFWRT+W ++G+KL FSS+ HPQTDGQT
Sbjct: 822  ASHVADLYFKEIVRLHGIPKTITSDRDVKFLSHFWRTIWAKLGTKLLFSSTAHPQTDGQT 881

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            E  NRSLGNLLR  VG NLKQWDL LPQ EFA+NRSIN+ TG SPF +VYG  P++PL+L
Sbjct: 882  ETVNRSLGNLLRCFVGKNLKQWDLILPQIEFAFNRSINQATGHSPFQVVYGNNPLSPLEL 941

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
             P    ++ S +G  +S +I+ LH +V+D I KH  K Q  AN  R+ + ++ GD VWI 
Sbjct: 942  IPQLPTQKFSTDGVQRSKEIQRLHKEVQDLIQKHNSKCQKLANRSRRAMHFEVGDQVWIR 1001

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
            LRKERFP G F KL+ +ADGPFR++K+I DNAY+I+LPG YN+SATFNVADLSPY
Sbjct: 1002 LRKERFPQGAFSKLKPKADGPFRIVKKIGDNAYQIDLPGDYNISATFNVADLSPY 1056


>ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
            carota subsp. sativus]
          Length = 1415

 Score =  910 bits (2351), Expect = 0.0
 Identities = 432/722 (59%), Positives = 550/722 (76%), Gaps = 1/722 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKTRDGLYEW+VMPFGLSNAPSTFMR+MNHV KPF+ R VVVYFDDIL+YS     H
Sbjct: 697  KTAFKTRDGLYEWLVMPFGLSNAPSTFMRVMNHVLKPFLRRCVVVYFDDILIYSPTLEAH 756

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
              DL++VF  LR++KLY N KKC+F  + V+FLGY++S +G+++D TK++AI  WPTP T
Sbjct: 757  KQDLKEVFESLRQEKLYINLKKCNFAVHNVLFLGYIISDQGVKVDQTKVQAILDWPTPRT 816

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGK-FKWTKEADKAFAELKQRVTQAPV 539
            IH++RSFHGLASFYRRFIRNFSS +AP+T+C+K  K   WT+EA+++F  +K++++ APV
Sbjct: 817  IHEVRSFHGLASFYRRFIRNFSSLVAPITDCIKSVKTLSWTQEAEESFQLIKRKISAAPV 876

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            LALP+FD VF+V+CDAS +GIG VLSQ  RPIAF+SEK   +R  YSTYD EFYAI+++L
Sbjct: 877  LALPDFDKVFEVDCDASKVGIGAVLSQEGRPIAFYSEKLTGSRCHYSTYDAEFYAIIQAL 936

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
             +W HYL+  EF+L SDHEALK+IN Q  LS RHAKWV FLQ ++FTIRHKAG  N VAD
Sbjct: 937  KHWEHYLVQREFILNSDHEALKFINSQQHLSQRHAKWVSFLQRFTFTIRHKAGIQNKVAD 996

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRV 1079
            ALSR+    + ++++V GFDTF+DLY +D  F  I+ +       ++  Q G+LFKG ++
Sbjct: 997  ALSRKASFLTEMRVEVEGFDTFKDLYADDKFFGPIFQAILQGEHSEYQLQEGFLFKGLQL 1056

Query: 1080 CIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAK 1259
            CIP CSLR+ I++E HA    GHFGRDKT+ALI  +++WPK++RD++R + RC  C  +K
Sbjct: 1057 CIPECSLREKIVMEKHA---LGHFGRDKTVALIENKYFWPKLKRDVTRHVERCHTCQRSK 1113

Query: 1260 TQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTY 1439
               TNAGLYTPLP+P+ PW DVS+DFV+GLPRTQ+  DS+MVVVDR+SKMAHFVPC K  
Sbjct: 1114 GGSTNAGLYTPLPIPSFPWNDVSMDFVVGLPRTQKRTDSVMVVVDRYSKMAHFVPCRKAM 1173

Query: 1440 DASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQ 1619
            DAS VA LYF EI RLHGVP+++TSDRD KF+ HFWRTLW ++G++L+FS+++HP+TDGQ
Sbjct: 1174 DASHVAELYFKEIFRLHGVPRSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQ 1233

Query: 1620 TEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLD 1799
            TEV NRSLGNLLR   GD  KQWDL LP AEFAYN S NRTT  SPF +V G  P T LD
Sbjct: 1234 TEVVNRSLGNLLRCFAGDKPKQWDLVLPFAEFAYNNSKNRTTQLSPFEVVGGLSPNTVLD 1293

Query: 1800 LAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWI 1979
            LAPIP  ++ S +  +   +IKE+H QVRD I     KY+A A+ HR++V++KEGD VW 
Sbjct: 1294 LAPIPNPKKASAKAEEMVERIKEIHEQVRDHIEASNLKYKAAADIHRRKVIFKEGDNVWA 1353

Query: 1980 HLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGDS 2159
             L K+RF  G   KL  R  GP ++LKR+NDNAY+++LP H   S  FNV  L PY+GD 
Sbjct: 1354 VLTKDRFLPGENHKLHDRKVGPCKILKRVNDNAYQLKLPSHIKSSDVFNVKHLLPYKGDV 1413

Query: 2160 DD 2165
             D
Sbjct: 1414 SD 1415


>dbj|GAU49459.1| hypothetical protein TSUD_407480 [Trifolium subterraneum]
          Length = 1464

 Score =  909 bits (2350), Expect = 0.0
 Identities = 443/747 (59%), Positives = 551/747 (73%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMN V KPF+G+FVVVY DDILVYS+   +H
Sbjct: 533  KTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNEVLKPFLGKFVVVYLDDILVYSKAIEEH 592

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
               L+Q+F  LR QKLY   +KC FL   V+FLGY+VS +G+ +D TK++AI +WP+PTT
Sbjct: 593  FTHLKQIFETLRAQKLYGKKEKCDFLVESVVFLGYVVSKDGVSVDQTKVDAIKTWPSPTT 652

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            + ++RSF GLASFYRRFI+NFS+  +PMTEC+K G F W ++A KAF  +K ++ +APVL
Sbjct: 653  VSEVRSFLGLASFYRRFIQNFSTIASPMTECLKKGAFGWNEQAQKAFELIKLKLCEAPVL 712

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
            ALP+F   F+VECDASG+GIG VL QN+RPIA+FSEK   AR  Y TYDKEFYAIVR+LD
Sbjct: 713  ALPDFTQPFEVECDASGVGIGAVLIQNKRPIAYFSEKLGGARLNYCTYDKEFYAIVRALD 772

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            YW HYL S  F+L SDHE+LKYINGQ KLSPRHAKWVEFLQ+++F+ ++K G +NVVADA
Sbjct: 773  YWSHYLRSNHFILHSDHESLKYINGQQKLSPRHAKWVEFLQSFNFSSKYKDGKSNVVADA 832

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRVC 1082
            LSRR+ L S L+ ++ GF+T +D Y+ED DF  I+S+C    F  +  Q G+LFK  R+C
Sbjct: 833  LSRRYALISILETRLLGFETLKDYYKEDVDFGEIYSNCENGAFGKYIVQGGFLFKENRLC 892

Query: 1083 IPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAKT 1262
            IP  S+R+ ++ E+H GGLAGHFG  KTL +++  F+WPKM  D+ ++I++C  CH+AK+
Sbjct: 893  IPRHSIRELLVREAHGGGLAGHFGITKTLEILKEHFHWPKMLGDVQKVISKCVTCHMAKS 952

Query: 1263 QHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTYD 1442
                 G YTPLP P+ PW DVS+DF++ LPRTQR KD+IMVVVDRFSKMAHFV C KT D
Sbjct: 953  SF-KPGAYTPLPTPSGPWMDVSMDFIVALPRTQRGKDAIMVVVDRFSKMAHFVACHKTDD 1011

Query: 1443 ASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQT 1622
            AS VA LYF EIVRLHGVPKT+ SDRD KF+S+FW TLW ++G+KL FS+SHHPQTDGQT
Sbjct: 1012 ASNVADLYFREIVRLHGVPKTIVSDRDSKFLSYFWNTLWRKLGTKLLFSTSHHPQTDGQT 1071

Query: 1623 EVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLDL 1802
            EVTNR+LG LLR LV    K WDL L  AEFAYNRS    T  SPF +VYG  P  PLDL
Sbjct: 1072 EVTNRTLGTLLRGLVSKTQKDWDLKLAHAEFAYNRSPTYATNHSPFEVVYGVNPYLPLDL 1131

Query: 1803 APIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWIH 1982
              +P  E +  +   +   + +LH QV++ I    E Y+ Q + ++K  L+ EGDLVW+H
Sbjct: 1132 ITMPKEELVHPDAEAKLKSMIKLHEQVQERIKAVNEVYK-QRSKNKKPKLFNEGDLVWVH 1190

Query: 1983 LRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGDSD 2162
            LRKERFP  R  KL  RADGPF+V+ +INDNAYKIELPG Y V ATFNV DLSPY  D  
Sbjct: 1191 LRKERFPGKRKNKLMPRADGPFKVISKINDNAYKIELPGEYGVHATFNVGDLSPYLDDDG 1250

Query: 2163 DDLKSGVPLFQDGEDDAGASHATNNLV 2243
                S   LF   E D    ++T   V
Sbjct: 1251 IQELSITVLFFAKEGDGCVLNSTKENV 1277


>gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 839

 Score =  878 bits (2269), Expect = 0.0
 Identities = 421/749 (56%), Positives = 556/749 (74%), Gaps = 7/749 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMNH  +  IG+FVVVYFDDIL+YS+  + H
Sbjct: 56   KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHALRDCIGKFVVVYFDDILIYSKSLSDH 115

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  L+QV  VLR+  L+AN  KC F  + VIFLG++VS  G+ +D  KI+AI  WP PT 
Sbjct: 116  VDHLRQVLLVLRDNHLFANVDKCTFCVDNVIFLGFVVSKNGVHVDPEKIKAIQEWPIPTN 175

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGK-FKWTKEADKAFAELKQRVTQAPV 539
            + ++RSFHGLASFYRRF+ NFS+  +P+ E +K    F+W ++ + AF +LK ++TQAPV
Sbjct: 176  VSEVRSFHGLASFYRRFVPNFSTLASPLNELVKKDVVFEWKEKHNLAFQDLKHKLTQAPV 235

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            LALP+F   F++ECDASGLGIG VL Q   PIA+FSEK + A   Y TYDKE YA+VR+L
Sbjct: 236  LALPDFSKTFELECDASGLGIGAVLLQGGHPIAYFSEKLHGAALNYPTYDKELYALVRAL 295

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
              W HYL++ EFV+ SDHE+LKY+ GQHKL+ RHAKWVE+L+ + + I++K GS NVVAD
Sbjct: 296  QTWEHYLVTKEFVIHSDHESLKYLKGQHKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVAD 355

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRV 1079
            ALSRRHVL ++L  Q+ GFD  ++LY++D DF   +S C   P++ +    G+LFK  ++
Sbjct: 356  ALSRRHVLLNTLGSQILGFDDIKELYEKDLDFANFYSLCIQKPYQGYYISEGFLFKENKL 415

Query: 1080 CIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAK 1259
            CIP  S+R  ++ ESH GGL GHFG +KTL+L+R +F+WP M+RD+ R  + C  C  AK
Sbjct: 416  CIPQGSIRKLLVRESHEGGLMGHFGIEKTLSLLREKFFWPHMKRDVQRFCSSCIACLQAK 475

Query: 1260 TQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTY 1439
            +     GLYTPLP+ ++PW D+S+DF++GLPRTQR KDSI VVVDRFSKMAHF+PC K  
Sbjct: 476  STTKPHGLYTPLPISSSPWVDISMDFILGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVD 535

Query: 1440 DASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQ 1619
            DAS +A+L+F EIVRLHG+PKT+ SDRDVKF+SHFW+TLW R+G+KL FS++ HPQTDGQ
Sbjct: 536  DASNIAKLFFQEIVRLHGLPKTIVSDRDVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQ 595

Query: 1620 TEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLD 1799
            TEV NRSLG +LR+++  N K WD  LP  EFAYNR +++TT  SPF IVYG  P+TPLD
Sbjct: 596  TEVVNRSLGTMLRAILKGNKKSWDDYLPHVEFAYNRVVHKTTNMSPFEIVYGFNPLTPLD 655

Query: 1800 LAPIP-IMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVW 1976
            L P+P +   I  EG  ++  +K+LH +VRD I   TEKYQ  +N  RK+V++KEGD VW
Sbjct: 656  LLPLPDVASFIHKEGTSRAEFVKKLHERVRDHIQSQTEKYQKYSNKGRKEVVFKEGDWVW 715

Query: 1977 IHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEG- 2153
            +HLRK+RF + R  KL  R DGPF++L++IN+NAY ++LP  Y VS +FNV+DLS + G 
Sbjct: 716  LHLRKDRFLSKRKSKLSPRGDGPFQILRKINNNAYVLDLPSEYGVSPSFNVSDLSLFTGL 775

Query: 2154 ----DSDDDLKSGVPLFQDGEDDAGASHA 2228
                ++  DL++  PL Q+G DD G+  A
Sbjct: 776  ATQEEAPLDLRTN-PL-QEGGDDGGSPWA 802


>gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 829

 Score =  876 bits (2264), Expect = 0.0
 Identities = 408/718 (56%), Positives = 538/718 (74%), Gaps = 3/718 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+DGLYEW+VMPFG SNAPSTFMR+M  + +PFIG F++VYFDDIL+Y+R   +H
Sbjct: 29   KTAFKTKDGLYEWLVMPFGFSNAPSTFMRVMTQILRPFIGVFLIVYFDDILIYTRSMKEH 88

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L++VF VLR +KLY N KKCHF+ + + FLG++VS +G+  D +KI AI  WPTP +
Sbjct: 89   LDHLREVFVVLRREKLYVNLKKCHFMTDSICFLGFIVSCKGVSADPSKISAIQEWPTPKS 148

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            IHD+RSFHGLA+FYRRFI+ FSS  AP+T+C+KG +F+W   AD+AF E+K R+T+APVL
Sbjct: 149  IHDVRSFHGLATFYRRFIKGFSSITAPLTDCLKGKEFQWASAADRAFREIKARLTEAPVL 208

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+F  VF+V CDASG+GIGGVLSQ   PIA+FSEK NEAR++YSTYDKEFYA+V++L 
Sbjct: 209  RLPDFGKVFEVACDASGVGIGGVLSQEGHPIAYFSEKLNEARQRYSTYDKEFYAVVQTLR 268

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            YWRHYL++AEFVL+SDH+ALKY+N Q  LS RHAKW  FLQ Y+F ++HKAG  N  ADA
Sbjct: 269  YWRHYLIAAEFVLYSDHQALKYLNSQKNLSARHAKWAAFLQEYTFVLKHKAGIDNKPADA 328

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFR---DFSKQNGYLFKGR 1073
            LSR  V+  ++++QV GFD  +  Y +  DF + ++     P +   D+  + GYLF+G 
Sbjct: 329  LSRMTVILHAMRVQVIGFDVMKSEYVDCKDFGSTYTRLLKVPSQSDSDYLIREGYLFRGP 388

Query: 1074 RVCIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHV 1253
            R+CIP  SLR+ +I E H+ G AGHFGRDKT AL+  R+YWP+  +D++R+++RCR C V
Sbjct: 389  RLCIPDSSLREFLIQELHSSGAAGHFGRDKTAALVSDRYYWPRQLKDVTRVVSRCRTCQV 448

Query: 1254 AKTQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSK 1433
            AK    N GLYTPLP+P  PWED+S+DFV+GLPRT R    I+VVVDRFSKMAHF+PCSK
Sbjct: 449  AKGGKQNTGLYTPLPIPDRPWEDLSMDFVLGLPRTSRRHGCILVVVDRFSKMAHFIPCSK 508

Query: 1434 TYDASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTD 1613
            T DAS +A L+ AEIVRLHG+PK++ SDRDVKF+S+FW+TLW ++G+KL +S+++HPQTD
Sbjct: 509  TSDASHIATLFVAEIVRLHGLPKSMVSDRDVKFMSYFWKTLWKKLGTKLLYSTAYHPQTD 568

Query: 1614 GQTEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITP 1793
            GQTEV NRSLGNLLR LVG+    WDL L  AEF YN S+NR+TG SPF +V G +P  P
Sbjct: 569  GQTEVVNRSLGNLLRCLVGERPSSWDLILHVAEFTYNNSVNRSTGMSPFRVVTGYDPRLP 628

Query: 1794 LDLAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLV 1973
            +DL  +P+  R +   +  ++ + ELH  +R  +    +K +A+ + HR+   ++ G  V
Sbjct: 629  IDLVDLPLTYRTNELASTFASHLHELHEDIRRKLALQYDKVKAEVDRHRRFTHFEVGSEV 688

Query: 1974 WIHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPY 2147
             I +   RFP G   KL AR  GPF+VLK+I +NAY+++LP    +S  FNV+DLSPY
Sbjct: 689  MIRVHPGRFPMGAQKKLAARRMGPFKVLKKIGENAYELDLPLEMGISPIFNVSDLSPY 746


>gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Cajanus cajan]
          Length = 1060

 Score =  884 bits (2284), Expect = 0.0
 Identities = 424/749 (56%), Positives = 556/749 (74%), Gaps = 7/749 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMNH  +  IG+FVVVYFDDIL+YS+  + H
Sbjct: 279  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHALRDCIGKFVVVYFDDILIYSQSLSDH 338

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  L+QVF VLR+  L+AN  KC F  + VIFLG++VS  G+ +D  KI+AI  WP PT 
Sbjct: 339  VDHLRQVFLVLRDNHLFANVDKCTFCVDNVIFLGFVVSKNGVHVDPEKIKAIQEWPIPTN 398

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGK-FKWTKEADKAFAELKQRVTQAPV 539
            + ++RSFHGLASFYRRF+ NFS+  +P+ E +K    F+W ++ + AF +LK ++TQAPV
Sbjct: 399  VSEVRSFHGLASFYRRFVPNFSTLASPLNELVKKDVVFEWKEKHNLAFQDLKHKLTQAPV 458

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            LALP+F   F++ECDASGLGIG VL Q   PIA+FSEK + A   Y TYDKE YA+VR+L
Sbjct: 459  LALPDFSKTFELECDASGLGIGAVLLQGGHPIAYFSEKLHGATLNYPTYDKELYALVRAL 518

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
              W HYL++ EFV+ SDHE+LKY+ GQHKL+ RHAKWVE+L+ + + I++K GS NVVAD
Sbjct: 519  QTWEHYLVTKEFVIHSDHESLKYLKGQHKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVAD 578

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRV 1079
            ALSRRHVL ++L  Q+ GFD  ++LY++D DF   +S C   P++ +    G+LFK  ++
Sbjct: 579  ALSRRHVLLNTLGSQILGFDDIKELYEKDLDFANFYSLCIQKPYQGYYISEGFLFKENKL 638

Query: 1080 CIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAK 1259
            CIP  S+R  ++ ESH GGL GHFG +KTL+L+R +F+WP M+RD+ R  + C  C  AK
Sbjct: 639  CIPQGSIRKLLVRESHEGGLMGHFGIEKTLSLLREKFFWPHMKRDVQRFCSSCIACLQAK 698

Query: 1260 TQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTY 1439
            +     GLYTPLP+ ++PW D+S+DF++GLPRTQR KDSI VVVDRFSKMAHF+PC K  
Sbjct: 699  STTKPHGLYTPLPISSSPWVDISMDFILGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVD 758

Query: 1440 DASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQ 1619
            DAS +A+L+F EIVRLHG+PKT+ SDRDVKF+SHFW+TLW R+G+KL FS++ HPQTDGQ
Sbjct: 759  DASNIAKLFFQEIVRLHGLPKTIVSDRDVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQ 818

Query: 1620 TEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLD 1799
            TEV NRSLG +LR+++  N K WD  LP  EFAYNR +++TT  SPF IVYG  P+TPLD
Sbjct: 819  TEVVNRSLGTMLRAILKGNKKSWDDYLPHVEFAYNRVVHKTTNMSPFEIVYGFNPLTPLD 878

Query: 1800 LAPIP-IMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVW 1976
            L P+P +   I  EG  ++  +K+LH +VRD I   TEKYQ   N  RK+V++KEGD VW
Sbjct: 879  LLPLPDVASFIHKEGTSRAEFVKKLHERVRDHIQSQTEKYQKYNNKGRKEVIFKEGDWVW 938

Query: 1977 IHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEG- 2153
            +HLRK+RFP+ R  KL  R DGPF++L++IN+NAY ++LP  Y VS++FNV+DLS + G 
Sbjct: 939  LHLRKDRFPSKRKSKLSPRGDGPFQILRKINNNAYVLDLPSEYGVSSSFNVSDLSLFTGL 998

Query: 2154 ----DSDDDLKSGVPLFQDGEDDAGASHA 2228
                +   DL+S  PL Q+G DD G   A
Sbjct: 999  ATLEEDALDLRSN-PL-QEGGDDGGGPWA 1025


>gb|PKU86468.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 905

 Score =  871 bits (2250), Expect = 0.0
 Identities = 417/666 (62%), Positives = 515/666 (77%), Gaps = 2/666 (0%)
 Frame = +3

Query: 3    KTAF--KTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTA 176
            KTAF  K RDGLYEW VMPFGLSNAPSTFMRLMN VF+PF+ +FVVVYFDDIL+Y     
Sbjct: 232  KTAFIFKVRDGLYEWTVMPFGLSNAPSTFMRLMNQVFQPFLCKFVVVYFDDILIYIGSLE 291

Query: 177  QHLLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTP 356
            +HL  L+ V   LREQKLY + +KC FL N + FLG+++SA  I  D  KIEAI +WP P
Sbjct: 292  EHLQHLRLVLGKLREQKLYGHIEKCKFLDNRIEFLGFIISAAEIEADPKKIEAIENWPIP 351

Query: 357  TTIHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAP 536
             +  DIR FHGLASFYRRFIRNFSS  AP+TE +K   F W+      F  LK+ +T +P
Sbjct: 352  QSFTDIRRFHGLASFYRRFIRNFSSIAAPITEILKSEPFTWSSGVQYNFELLKKALTSSP 411

Query: 537  VLALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRS 716
            VL LP+F  VF+VECDAS +GIG VLSQ   PIAFFSEK NEAR+KYSTYDKEFYA+VR+
Sbjct: 412  VLRLPDFSKVFEVECDASYVGIGAVLSQEGHPIAFFSEKLNEARQKYSTYDKEFYALVRA 471

Query: 717  LDYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVA 896
            L +W HYLL+ +FVL++DHEAL+++N Q KL  RHA W+EFL  ++F I+HKAG  N  A
Sbjct: 472  LHHWNHYLLAKDFVLYTDHEALRFLNSQKKLKGRHATWLEFLATFNFVIKHKAGRLNQPA 531

Query: 897  DALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRR 1076
            DALSR H+L  +LQ +V G +TF+DLY  D DF+TIWS C T P++ F  + GYLF G  
Sbjct: 532  DALSRCHLLLQTLQNKVLGMETFKDLYATDADFQTIWSKCLTQPYKLFHIKEGYLFHGPC 591

Query: 1077 VCIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVA 1256
            +C+P  S+R +I+ E H GGL GHFGRDKTL+LI+ +FYWP + RD+ + +  CRVC +A
Sbjct: 592  LCVPRGSIRLAIVSECHDGGLMGHFGRDKTLSLIQEKFYWPALSRDVGKYVQSCRVCRIA 651

Query: 1257 KTQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKT 1436
            KTQ TNAGLY+PLPVP APWEDVSLDFV+GLPRTQR+KDSIMVVVDRFSKMAHFV C KT
Sbjct: 652  KTQGTNAGLYSPLPVPKAPWEDVSLDFVLGLPRTQRNKDSIMVVVDRFSKMAHFVACHKT 711

Query: 1437 YDASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDG 1616
             DAS +A LY  EIVR+HG+P T+TSDRDVKF+S+FW+TLW+++G++LQ+SS+ HPQTDG
Sbjct: 712  MDASHIADLYLKEIVRIHGIPLTITSDRDVKFMSYFWKTLWSKLGTRLQYSSAAHPQTDG 771

Query: 1617 QTEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPL 1796
            QTEV NRSLGNLLR  VG NLKQWDL L Q EFA+NRS+N++T +SPF IVYGR P+TP+
Sbjct: 772  QTEVVNRSLGNLLRCFVGKNLKQWDLVLAQIEFAFNRSVNQSTHKSPFEIVYGRNPLTPV 831

Query: 1797 DLAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVW 1976
            DL PI      + +G  +S +I++LH QV D I+K  ++Y+ QAN HRK+V+Y+EGDLVW
Sbjct: 832  DLIPIVQHTTFNSDGEQRSKEIQKLHQQVHDEIVKQNDRYRNQANKHRKKVVYQEGDLVW 891

Query: 1977 IHLRKE 1994
            I LR +
Sbjct: 892  IRLRSD 897


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  889 bits (2298), Expect = 0.0
 Identities = 430/753 (57%), Positives = 556/753 (73%), Gaps = 5/753 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGLSNAPSTFMRLM  V +P +G+F VVYFDDILVYS+   +H
Sbjct: 723  KTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTKGEH 782

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            L  L+ VF +LREQKLY   +KC F+  EV FLGYL+S  GI +D   I A+ SWPTPTT
Sbjct: 783  LKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPTPTT 842

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGKFKWTKEADKAFAELKQRVTQAPVL 542
            + ++RSFHGLASFYRRFI+NFS+ +AP+TECM+ G+F+WT++A ++F ++KQ +   P+L
Sbjct: 843  VTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMCNTPIL 902

Query: 543  ALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSLD 722
             LP+FD +F+VECDASG+GIG VL Q+Q+P+A+FSEK N A+ KYSTYDKEFYAI+R+L 
Sbjct: 903  KLPDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRALM 962

Query: 723  YWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVADA 902
            +W HYL    FVL SDHEALKYINGQHKL+ RHAKWVEFLQ+++F+ ++K G  NVVADA
Sbjct: 963  HWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGKKNVVADA 1022

Query: 903  LSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSK---QNGYLFKGR 1073
            LSRRH L S +  +V GF+  ++LY+EDPDF   W +         SK   Q G+LF+G 
Sbjct: 1023 LSRRHSLLSVMSNRVLGFEFMKELYKEDPDFSEEWITQTEGHKNQGSKYLLQEGFLFQGN 1082

Query: 1074 RVCIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHV 1253
            ++C+P  S RD +I E H+GG+ GHFG  KTL +++ +FYWP+M  D+  I+ RC  C +
Sbjct: 1083 KLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRMMGDVQIILRRCSKCQL 1142

Query: 1254 AKTQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSK 1433
            +K+     G YTPLPVP+ PWED+S+DF++ LPRTQR KDS+MVVVDRFSKMAHFV C K
Sbjct: 1143 SKSSF-QPGPYTPLPVPSKPWEDLSMDFIVALPRTQRGKDSVMVVVDRFSKMAHFVACKK 1201

Query: 1434 TYDASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTD 1613
            T DA  VA L+  EIVRLHGVPKT+ SDRD KF+ +FW+TLW  + +KL FS+SHHPQTD
Sbjct: 1202 TEDAVSVAELFLKEIVRLHGVPKTIVSDRDTKFMGYFWKTLWKLLKTKLLFSTSHHPQTD 1261

Query: 1614 GQTEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITP 1793
            GQTEVTNR+LG +LR LV  +LK WDL L  AEFA+NR+ +  TG SPF +VYG  P+ P
Sbjct: 1262 GQTEVTNRTLGRILRCLVSKSLKDWDLKLAAAEFAFNRAPSTATGHSPFEVVYGVNPLMP 1321

Query: 1794 LDLAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLV 1973
            LDL+ +P  E I+++   ++ Q+ +LH  V+  I +  E+YQ      + +  ++ GDLV
Sbjct: 1322 LDLSSVP-KENINLDAMKRAEQLLKLHETVKRQIERTNEQYQKHLKVPKGKKEFEPGDLV 1380

Query: 1974 WIHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEG 2153
            WIHLRKERFPA R  KL  R+DGPF V+++I  +AYKI+LPG Y V  TFNV DLSPY  
Sbjct: 1381 WIHLRKERFPAKRKNKLMPRSDGPFEVVEKIGPSAYKIDLPGDYGVHGTFNVGDLSPYYE 1440

Query: 2154 DSDDDLKSGVPL--FQDGEDDAGASHATNNLVE 2246
            DS D+  +G+     Q G  DAGAS+  N + +
Sbjct: 1441 DSGDEEVTGLRTSPVQPGGVDAGASNQGNQIFQ 1473


>gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 797

 Score =  863 bits (2231), Expect = 0.0
 Identities = 414/739 (56%), Positives = 545/739 (73%), Gaps = 3/739 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMNHV K F+G+ VVVYFDDIL+YS +   H
Sbjct: 56   KTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLKEFLGKCVVVYFDDILIYSTNFDLH 115

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  L  V  VLR++KL+AN +KC F  + V+FLG++VS++G+++D  KI AI  WPTP  
Sbjct: 116  VEHLSAVMNVLRKEKLFANIEKCTFCTDHVVFLGFVVSSKGVQVDEEKIRAIQEWPTPKN 175

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGK-FKWTKEADKAFAELKQRVTQAPV 539
            + ++RSFHGLASFYRRF+++FS+  AP+ E +K    FKW ++ +KAF+ELK ++T AP+
Sbjct: 176  VSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVKKHVGFKWGEKQEKAFSELKHKLTNAPI 235

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            LALPNF   F++ECDAS +GIG VL Q   PIA+FSEK N A   Y TYDKE YA+VR+L
Sbjct: 236  LALPNFAKSFEIECDASNVGIGAVLMQEGHPIAYFSEKLNGAALNYPTYDKELYALVRAL 295

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
              W+HYLL  EFV+ SDHE+LKY+ GQ KL+ RHAKWVEFL+ + + I+HK G  NVVAD
Sbjct: 296  RTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNVVAD 355

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRV 1079
            ALSRRH L S L+ ++ G ++ +D+Y  D DF   +++C       + + NG+LFK  R+
Sbjct: 356  ALSRRHNLLSMLETKLFGLESLKDMYMHDVDFAENFAACEKFSENGYYRHNGFLFKANRL 415

Query: 1080 CIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAK 1259
            C+P CS+R+ ++ ESH GGL GHFG  KTL +++  FYWP M+ D+ +    C VC  AK
Sbjct: 416  CVPKCSIRELLVSESHEGGLMGHFGVQKTLEILQEHFYWPHMKHDVHKFCDHCIVCKKAK 475

Query: 1260 TQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTY 1439
            ++    GLYTPLPVP  PW D+S+DFV+GLPRT+  KDSI VVVDRFSKMAHF+PC K  
Sbjct: 476  SKVKPHGLYTPLPVPDFPWIDISMDFVLGLPRTKNGKDSIFVVVDRFSKMAHFIPCKKVN 535

Query: 1440 DASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQ 1619
            DA  VA L+F E+VRLHG+P+++ SDRD KF+SHFWRTLW ++G+KL FS++ HPQTDGQ
Sbjct: 536  DACHVADLFFREVVRLHGLPRSIVSDRDTKFLSHFWRTLWGKLGTKLLFSTTCHPQTDGQ 595

Query: 1620 TEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLD 1799
            TEV NR+LG LLR+++  N+K W+  LP  EFAYNR+++ TT  SPF IVYG  P+TPLD
Sbjct: 596  TEVVNRTLGTLLRTVLKKNIKFWEEHLPHVEFAYNRAVHSTTKCSPFEIVYGFNPLTPLD 655

Query: 1800 LAPIPIMERISVEGADQSAQ-IKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVW 1976
            L P+P +     + A   A+ +K+LH QV+  I K  E Y  QAN  RK+V+++ GD VW
Sbjct: 656  LLPMPNISEFKHKDAQAKAEYVKKLHEQVKAQIEKKIESYVKQANKGRKKVIFEPGDWVW 715

Query: 1977 IHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYE-G 2153
            +H+RKERFP  R  KLQ R DGPF+VL++INDNAYKI+LPG Y VS++FNVADL+ ++ G
Sbjct: 716  VHMRKERFPEQRKSKLQPRGDGPFQVLEKINDNAYKIDLPGEYGVSSSFNVADLTHFDAG 775

Query: 2154 DSDDDLKSGVPLFQDGEDD 2210
            D    L+  V   Q+GE+D
Sbjct: 776  DEFIALRKNVA--QEGEND 792


>gb|PNY17872.1| putative gag-pol polyprotein, partial [Trifolium pratense]
          Length = 1414

 Score =  884 bits (2283), Expect = 0.0
 Identities = 419/738 (56%), Positives = 551/738 (74%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMNHV + FIG+FVVVYFDDIL+YS+  ++H
Sbjct: 658  KTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRSFIGKFVVVYFDDILIYSKTLSEH 717

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  LQ V  VLRE KLYAN KKC F    V+FLG+++S++G+ +D  K++AI  WP P  
Sbjct: 718  VDHLQAVLKVLRENKLYANLKKCSFCLESVVFLGFVISSKGVSVDEEKVKAIREWPVPKN 777

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGGK-FKWTKEADKAFAELKQRVTQAPV 539
              ++RSFHGLA FYRRF+++FSS  AP+TE +K    FKW+   +KAF  LK R+T AP+
Sbjct: 778  AGEVRSFHGLAGFYRRFVKDFSSIAAPLTELVKKNVVFKWSDVHEKAFNLLKDRLTNAPL 837

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            L LPNFD  F+++CDASG+GIG VL Q+ +PIAFFSEK N A   YSTYDKE YA+VR+L
Sbjct: 838  LCLPNFDKAFEIQCDASGVGIGAVLMQDSKPIAFFSEKLNGAALNYSTYDKELYALVRAL 897

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
              W+HYL + EFV+ +DH++LK++  Q KL  RHAKW+EF++ + + I++K G  NVVAD
Sbjct: 898  QIWQHYLWTREFVIHTDHQSLKFLKSQGKLQKRHAKWLEFIEMFPYVIKYKDGKENVVAD 957

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSCATTPFRDFSKQNGYLFKGRRV 1079
            ALSRR+ L +SLQ ++ GF+  +DLY  D DF  I  SC+   F D+   +GYLFK  ++
Sbjct: 958  ALSRRYALLTSLQTKLLGFEFVKDLYSNDSDFGNICESCSKHAFGDYYMHDGYLFKKNKL 1017

Query: 1080 CIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVAK 1259
            C+PVCSLR+ ++ ESH GGL GHFG  KTL +++  FYWPKM +D+  +  +C  C  AK
Sbjct: 1018 CVPVCSLREMLVRESHGGGLMGHFGVKKTLEILQEHFYWPKMMQDVQSVCVKCVPCKQAK 1077

Query: 1260 TQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKTY 1439
            ++    GLYTPL VP+ PW DVS+DFV+GLPR+Q  KDSI VVVDRFSKMAHF+ CSKT 
Sbjct: 1078 SKIMPHGLYTPLHVPSQPWTDVSMDFVLGLPRSQGGKDSIFVVVDRFSKMAHFIACSKTN 1137

Query: 1440 DASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDGQ 1619
            DA+ +A L+F E+VRLHG+PKT+ SDRDVKF+SHFWRTLW ++G+KL FS+  HPQTDGQ
Sbjct: 1138 DATHIADLFFKEVVRLHGLPKTIVSDRDVKFLSHFWRTLWNKLGTKLLFSTVAHPQTDGQ 1197

Query: 1620 TEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPLD 1799
            TEV NR+L  LLRS++  NLK W+  LP  EFAYNR+ + TT  SPF IVYG  P+TPLD
Sbjct: 1198 TEVVNRTLTALLRSIIQKNLKNWENCLPHVEFAYNRTFHSTTSFSPFEIVYGFNPMTPLD 1257

Query: 1800 LAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVWI 1979
            + P+P  E ++++G  ++  ++ELHAQVR  I K  E+Y  QAN  R +V ++ GD VW+
Sbjct: 1258 ILPLPTNEFVNLDGKKKADFVRELHAQVRANIEKKNEQYARQANKGRVKVTFEPGDWVWV 1317

Query: 1980 HLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHY-NVSATFNVADLSPYEGD 2156
            H+RKERFP  R  KLQ R DGPF+V+++INDNAYK++LP  Y N+SATFNVADLS ++  
Sbjct: 1318 HMRKERFPNQRKSKLQPRGDGPFQVVEKINDNAYKLDLPSEYENISATFNVADLSLFDVG 1377

Query: 2157 SDDDLKSGVPLFQDGEDD 2210
            +  D ++    F++GE+D
Sbjct: 1378 NGSDSRTNP--FEEGEND 1393


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  892 bits (2304), Expect = 0.0
 Identities = 412/749 (55%), Positives = 566/749 (75%), Gaps = 4/749 (0%)
 Frame = +3

Query: 3    KTAFKTRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKPFIGRFVVVYFDDILVYSRDTAQH 182
            KTAFKT+ GLYEW+VMPFGL+NAPSTFMRLMNHV + FIG+FVVVYFDDIL+YS+   +H
Sbjct: 828  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEH 887

Query: 183  LLDLQQVFCVLREQKLYANNKKCHFLANEVIFLGYLVSAEGIRMDATKIEAITSWPTPTT 362
            +  +QQV  VLR+++LYAN +KC F  ++V+FLG++VS  GI++D +K++AI  WPTP  
Sbjct: 888  VAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPEN 947

Query: 363  IHDIRSFHGLASFYRRFIRNFSSTIAPMTECMKGG-KFKWTKEADKAFAELKQRVTQAPV 539
            +  ++SF GLA FYRRF+R FS+  AP+ E  K G  F+W +  +KAF ELK+R+++ P+
Sbjct: 948  VSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGPL 1007

Query: 540  LALPNFDDVFQVECDASGLGIGGVLSQNQRPIAFFSEKFNEARRKYSTYDKEFYAIVRSL 719
            L LP+F   F+VECDASG+GIGGVL QN +P+A+FSEK   A+  YS YDKE YA+VR+L
Sbjct: 1008 LVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRAL 1067

Query: 720  DYWRHYLLSAEFVLFSDHEALKYINGQHKLSPRHAKWVEFLQAYSFTIRHKAGSANVVAD 899
            + W+HYL   EFV+ SDHEALKY+ GQ KL+ RHAKWVEF++ + + +++K G  N+VAD
Sbjct: 1068 ETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVAD 1127

Query: 900  ALSRRHVLTSSLQIQVPGFDTFRDLYQEDPDFRTIWSSC-ATTPFRDFSKQNGYLFKGRR 1076
            ALSR++VL + L+++V G ++ ++LY  D DF   ++ C A   +  +   +G+LF+  +
Sbjct: 1128 ALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFLFRANK 1187

Query: 1077 VCIPVCSLRDSIILESHAGGLAGHFGRDKTLALIRGRFYWPKMERDISRIIARCRVCHVA 1256
            +C+P CS+R  ++ E+HAGGL GHFG  KT  ++   FYWPKM RD+ R++ RC  CH A
Sbjct: 1188 LCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKA 1247

Query: 1257 KTQHTNAGLYTPLPVPAAPWEDVSLDFVMGLPRTQRHKDSIMVVVDRFSKMAHFVPCSKT 1436
            K++    GLYTPLPVP+APWED+S+DFV+GLPRT+R +DSI VVVDRFSKMAHF+PC K+
Sbjct: 1248 KSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 1307

Query: 1437 YDASQVARLYFAEIVRLHGVPKTLTSDRDVKFVSHFWRTLWTRMGSKLQFSSSHHPQTDG 1616
             DAS +A L+F+EIVRLHG+PKT+ SDRD KF+S+FW+TLW ++G++L FS++ HPQTDG
Sbjct: 1308 DDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDG 1367

Query: 1617 QTEVTNRSLGNLLRSLVGDNLKQWDLTLPQAEFAYNRSINRTTGRSPFFIVYGREPITPL 1796
            QTEV NR+L  LLR+L+  NLK+W+  LP  EFAYNR+++ TT   PF +VYG +P++P+
Sbjct: 1368 QTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPI 1427

Query: 1797 DLAPIPIMERISVEGADQSAQIKELHAQVRDTIIKHTEKYQAQANTHRKQVLYKEGDLVW 1976
            DL P+P+ ER  +E + ++  +K++H + ++ I K ++ Y A AN +RK+V ++ GDLVW
Sbjct: 1428 DLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVW 1487

Query: 1977 IHLRKERFPAGRFGKLQARADGPFRVLKRINDNAYKIELPGHYNVSATFNVADLSPYEGD 2156
            +HLRK+RFP  R  KL  R DGPFRVL +INDNAYKIELP  Y VS+TFNVADL+P+ G 
Sbjct: 1488 VHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPFFGL 1547

Query: 2157 SDDDLKSGVPLFQDGEDDAG--ASHATNN 2237
             D +     P FQ+GEDD      HAT++
Sbjct: 1548 EDSESSRSTP-FQEGEDDEDIPTVHATSS 1575