BLASTX nr result

ID: Chrysanthemum22_contig00039224 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039224
         (857 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH96359.1| hypothetical protein Ccrd_001565 [Cynara carduncu...    60   4e-07

>gb|KVH96359.1| hypothetical protein Ccrd_001565 [Cynara cardunculus var. scolymus]
          Length = 216

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = -3

Query: 690 GKKDYVLNLATKASKILFWISFKHSPCYHHCRFTRCFHHLHPHFTSKPQTLPHTS*NNGP 511
           G +  V  ++TKA +I F +SFK +P YHH RFT  FHHLH    S  QT P     +  
Sbjct: 110 GMEYKVTRVSTKAREIPFRVSFKCTPRYHHRRFTGRFHHLHRRSCSATQTPPQAPEKSAD 169

Query: 510 KSKSSRQCVD----ADFDNRSNRPQQDSDYAYDEHTQELNN 400
             +++ + V+     + DNR N P+++S+   + H     N
Sbjct: 170 GGETTFENVENALKQESDNRKNAPKRESENGGEGHKHAAAN 210


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