BLASTX nr result

ID: Chrysanthemum22_contig00039085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00039085
         (601 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023762356.1| uncharacterized protein LOC111910762 [Lactuc...    57   4e-07
ref|XP_023768259.1| uncharacterized protein LOC111916835 [Lactuc...    54   1e-05

>ref|XP_023762356.1| uncharacterized protein LOC111910762 [Lactuca sativa]
 gb|PLY98553.1| hypothetical protein LSAT_1X30700 [Lactuca sativa]
          Length = 131

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/97 (30%), Positives = 42/97 (43%)
 Frame = -2

Query: 498 THCYCGIRLAKRVSWTERNPCRRFLVCPKPSVCFSSMFTYYKSSICFK*IFLQFCPDKCD 319
           THC CG  + +  SW  RNP RRF+ CP            Y+ S              C 
Sbjct: 21  THCDCGDLVGRWTSWKTRNPGRRFIGCPN-----------YRDS-----------SKDCK 58

Query: 318 AFYWIDGELKGAWYKNAMYEMYLSMNGDQRDVFAEEI 208
            FYW+D  L   WYK+ + +++   NGD  +   E +
Sbjct: 59  FFYWVDPPLPNQWYKDLLLQLHNGWNGDVVEQMEEAV 95


>ref|XP_023768259.1| uncharacterized protein LOC111916835 [Lactuca sativa]
 ref|XP_023743169.1| uncharacterized protein LOC111891350 [Lactuca sativa]
 gb|PLY74300.1| hypothetical protein LSAT_1X123660 [Lactuca sativa]
 gb|PLY78924.1| hypothetical protein LSAT_8X440 [Lactuca sativa]
 gb|PLY82081.1| hypothetical protein LSAT_8X39100 [Lactuca sativa]
          Length = 131

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 29/97 (29%), Positives = 41/97 (42%)
 Frame = -2

Query: 498 THCYCGIRLAKRVSWTERNPCRRFLVCPKPSVCFSSMFTYYKSSICFK*IFLQFCPDKCD 319
           THC CG  + +  SW  RNP RRF+ CP            Y+ S              C 
Sbjct: 21  THCDCGDLVGRWTSWKTRNPGRRFIGCPN-----------YRDS-----------SKDCK 58

Query: 318 AFYWIDGELKGAWYKNAMYEMYLSMNGDQRDVFAEEI 208
            F W+D  L   WYK+ + +++   NGD  +   E +
Sbjct: 59  FFDWVDPPLPNQWYKDLLLQLHNGWNGDVVEQMEEAV 95


Top