BLASTX nr result

ID: Chrysanthemum22_contig00038679 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038679
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023764129.1| F-box protein At5g07610-like [Lactuca sativa...    64   2e-13
ref|XP_021974135.1| F-box protein At5g07610-like [Helianthus ann...    61   5e-09

>ref|XP_023764129.1| F-box protein At5g07610-like [Lactuca sativa]
 gb|PLY85252.1| hypothetical protein LSAT_2X127801 [Lactuca sativa]
          Length = 430

 Score = 63.5 bits (153), Expect(2) = 2e-13
 Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 146 LTRTGICTVLKFGEGKGIEIRTPVIHGGW-VRGIVYPLVESCDPLMFIDIFPPTSVKFNV 322
           + + G    LK  E    +I TP +  GW V+   YPLVES D L+FIDIFPP S KF+V
Sbjct: 251 INKKGYIFYLKINEDLLDQIPTPTVRAGWNVKRHCYPLVESRDGLLFIDIFPPLSFKFDV 310

Query: 323 HEMDKEAS 346
           HEM+++ S
Sbjct: 311 HEMNRDYS 318



 Score = 39.7 bits (91), Expect(2) = 2e-13
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
 Frame = +3

Query: 330 WIKKHRVDLTQVMTKFPDRTQ------VVFSRPLQSFVIRTL 437
           W  K+ VDL +VMTKFP  ++      + F RP QSFVI  L
Sbjct: 320 WTVKYHVDLNEVMTKFPQTSEMTSLNLLTFFRPFQSFVIHCL 361



 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +1

Query: 31  EVCSSKSRSWKLHGKLTNNVGIDTEFMGGVY*NRVIHWVNKNGYMYCFKVWRG-QGY*NS 207
           E+ SS++RSWK+ GK   N  IDTEF GGVY N  +HW+NK GY++  K+         +
Sbjct: 214 EIYSSENRSWKMSGKPFANQ-IDTEFTGGVYWNDAVHWINKKGYIFYLKINEDLLDQIPT 272

Query: 208 YTCYTWWMGKRHC 246
            T    W  KRHC
Sbjct: 273 PTVRAGWNVKRHC 285


>ref|XP_021974135.1| F-box protein At5g07610-like [Helianthus annuus]
          Length = 448

 Score = 60.8 bits (146), Expect(2) = 5e-09
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
 Frame = +2

Query: 146 LTRTGICTVLKFGEGKGIEIRTPVIHGGW-VRGIVYPLVESCDPLMFIDIFPPTSVKFNV 322
           + + G    LK  E +   + TPV+H GW V+   YP+VES D L+FIDIFP +S+K ++
Sbjct: 271 VNKKGYVLYLKIDEDRVDRVATPVVHDGWNVKKHCYPIVESNDCLLFIDIFPASSLKLDI 330

Query: 323 HEMDKEAS 346
           +EM+++ S
Sbjct: 331 YEMNRDYS 338



 Score = 27.3 bits (59), Expect(2) = 5e-09
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 330 WIKKHRVDLTQVMTKFPDRTQVVFSRPLQSFV 425
           W  K+ VDL +VM++FP+   ++  R L+S +
Sbjct: 340 WSVKYHVDLNRVMSRFPETDVII--RALRSLM 369



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +1

Query: 31  EVCSSKSRSWKLHGKLTNNVGIDTEFMGGVY*NRVIHWVNKNGYMYCFKVWRGQ-GY*NS 207
           EV SS++  W++ G    N  +DTEFMGGVY N  +HWVNK GY+   K+   +     +
Sbjct: 234 EVYSSETGKWRMFGTPCGNQ-VDTEFMGGVYWNGAVHWVNKKGYVLYLKIDEDRVDRVAT 292

Query: 208 YTCYTWWMGKRHC 246
              +  W  K+HC
Sbjct: 293 PVVHDGWNVKKHC 305


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