BLASTX nr result

ID: Chrysanthemum22_contig00038610 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038610
         (490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99992.1| F-box domain, cyclin-like protein [Cynara cardunc...    92   8e-19
ref|XP_023766401.1| F-box/LRR-repeat protein At4g14103-like [Lac...    85   3e-16
ref|XP_022031683.1| FBD-associated F-box protein At2g26860-like ...    79   6e-14
gb|OTG38162.1| putative F-box/RNI-like/FBD-like domains-containi...    74   2e-12
ref|XP_022031685.1| FBD-associated F-box protein At2g26860-like ...    74   2e-12
ref|XP_021984933.1| F-box protein At4g22280-like [Helianthus ann...    71   2e-11
gb|OTG38161.1| putative F-box domain, Leucine-rich repeat domain...    58   7e-07
gb|OTG38160.1| putative F-box domain, Leucine-rich repeat domain...    58   7e-07

>gb|KVH99992.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 407

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEELFV R+     DNL+ FKVSS SL+RL I F   ++ ++ +VVIDAP L+YIY+ D
Sbjct: 206 VLEELFVERQVIGQFDNLQTFKVSSPSLKRLRISFALCILGNY-RVVIDAPKLEYIYILD 264

Query: 229 NMANDYYLTKPLDLVEGNI----SHSAETIAQIIPFLSSAKILKLT 354
            M+ DY LT P+ LVE NI      + E+IAQI+  LS  KIL LT
Sbjct: 265 VMSTDYSLTMPMSLVEANIKARTDSNTESIAQIVAILSPVKILTLT 310


>ref|XP_023766401.1| F-box/LRR-repeat protein At4g14103-like [Lactuca sativa]
          Length = 403

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
 Frame = +1

Query: 52  VLEELFVAREEY-YPDNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEELFV R+     DNLE+FKVSS SL+RL I F   V  D+ K VIDAP L+Y+Y+ D
Sbjct: 192 VLEELFVERQVIGSSDNLEVFKVSSPSLKRLRISFSLCVHGDY-KAVIDAPNLEYMYIVD 250

Query: 229 NMANDYYLTKPL-DLVEGNISHSA-ETIAQIIPFLSSAKILKLTCIGSSVLNHPHGLNMP 402
            ++  Y    PL  LVE  ++  A      ++P LSS K+L LT    + L++   + + 
Sbjct: 251 VISAHYTFPNPLMSLVEVYMNTPAVRNTEYLLPTLSSVKLLTLTDSTLTALHNADAVTIG 310

Query: 403 IFPNLVRLVTG 435
           IF NLV+LV G
Sbjct: 311 IFENLVKLVIG 321


>ref|XP_022031683.1| FBD-associated F-box protein At2g26860-like [Helianthus annuus]
          Length = 471

 Score = 78.6 bits (192), Expect = 6e-14
 Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEEL+V R+     DN+E   V S SL++L + F      DF +VVIDAP L+Y+ V D
Sbjct: 180 VLEELYVERQIIGEVDNMESCMVISPSLKKLGLSFALSGEGDF-RVVIDAPRLEYLNVVD 238

Query: 229 NMANDY-YLTKPLDLVEGNI---SHSAETIAQIIPFLSSAKILKLTCIGSSVLNHPHGLN 396
            M+  Y  LT+PL L E ++   +   + +A ++  +S+ K+L L  +     N  H  N
Sbjct: 239 VMSTSYSLLTEPLSLTEAHLKLRNGVVQPVAPLVTCISNVKVLTLIDLALLAFNRIHDFN 298

Query: 397 MPIFPNLVRLVTG 435
           MP+FPNL+    G
Sbjct: 299 MPVFPNLIDFYIG 311


>gb|OTG38162.1| putative F-box/RNI-like/FBD-like domains-containing protein
           [Helianthus annuus]
          Length = 450

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEEL+V R+     DN+E   V S SL++L + F      DF +VVIDAP L+++ V D
Sbjct: 200 VLEELYVERQIIGEVDNMESCMVISPSLKKLGLSFALSGRGDF-RVVIDAPRLEHLSVVD 258

Query: 229 NMANDY-YLTKPLDLVEGNI---SHSAETIAQIIPFLSSAKILKLTCIGSSVLNHPHGLN 396
            M+  Y  LTKPL L E ++   +   E +A ++  +S+ K+L L  +     ++ +  +
Sbjct: 259 VMSTRYSLLTKPLSLTEAHLKVRNGVVEAVASLVTCISNVKVLMLNDLALVTFSYIYDFD 318

Query: 397 MPIFPNLVRLVTG 435
           MP+FPNL  +  G
Sbjct: 319 MPVFPNLTDIFIG 331


>ref|XP_022031685.1| FBD-associated F-box protein At2g26860-like [Helianthus annuus]
          Length = 462

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEEL+V R+     DN+E   V S SL++L + F      DF +VVIDAP L+++ V D
Sbjct: 200 VLEELYVERQIIGEVDNMESCMVISPSLKKLGLSFALSGRGDF-RVVIDAPRLEHLSVVD 258

Query: 229 NMANDY-YLTKPLDLVEGNI---SHSAETIAQIIPFLSSAKILKLTCIGSSVLNHPHGLN 396
            M+  Y  LTKPL L E ++   +   E +A ++  +S+ K+L L  +     ++ +  +
Sbjct: 259 VMSTRYSLLTKPLSLTEAHLKVRNGVVEAVASLVTCISNVKVLMLNDLALVTFSYIYDFD 318

Query: 397 MPIFPNLVRLVTG 435
           MP+FPNL  +  G
Sbjct: 319 MPVFPNLTDIFIG 331


>ref|XP_021984933.1| F-box protein At4g22280-like [Helianthus annuus]
 gb|OTG38158.1| putative F-box/RNI-like superfamily protein [Helianthus annuus]
          Length = 452

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVM-RDFLKVVIDAPTLKYIYVF 225
           VLEEL+V R+     D +E   V S SL++L + F      R   +VVIDAP L+Y+ V 
Sbjct: 199 VLEELYVERQLIGELDGMESCMVISPSLKKLRLSFALSGSGRGNFRVVIDAPRLEYLSVL 258

Query: 226 DNMANDY-YLTKPLDLVEGNISHSAET----IAQIIPFLSSAKILKLTCIGSSVLNHPHG 390
           D M   Y  LT+PL L E ++          +AQ++  LS+ K+L L     +   + H 
Sbjct: 259 DVMPTSYSLLTEPLSLTEAHLKVQTGGGDFHVAQLVTCLSNVKVLTLNDSTLTAFINVHN 318

Query: 391 LNMPIFPNLVRLVTG 435
           L+MP+FPNLV    G
Sbjct: 319 LDMPVFPNLVEFAIG 333


>gb|OTG38161.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 325

 Score = 58.2 bits (139), Expect(2) = 7e-07
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEEL+V R+     D++    V S SL+RL + F      DF +VVIDAP L+Y+ + D
Sbjct: 200 VLEELYVERQLIGELDDMVSCMVISPSLKRLRLSFALSGRGDF-RVVIDAPRLEYLSIMD 258

Query: 229 NMANDY-YLTKPLDLVEGNISHSA----ETIAQIIPFLSSAKILKL 351
            M+  Y  LT+PL L E ++  S     E +AQ++  LS+ K+L L
Sbjct: 259 VMSTRYSLLTEPLSLTEAHLRVSTYDGDEHVAQLVRCLSNVKVLML 304



 Score = 22.7 bits (47), Expect(2) = 7e-07
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 8   YFKDCSVTNLVSGCP 52
           Y  D    NL+SGCP
Sbjct: 185 YLHDVCFKNLISGCP 199


>gb|OTG38160.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 324

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = +1

Query: 52  VLEELFVAREEYYP-DNLEMFKVSSGSLRRLWIEFPRFVMRDFLKVVIDAPTLKYIYVFD 228
           VLEEL+V R+     DN+E   V S SL++L + F      DF +VVIDAP L+Y+ V D
Sbjct: 200 VLEELYVERQIIGEVDNMESCMVISPSLKKLGLSFALSGEGDF-RVVIDAPRLEYLNVVD 258

Query: 229 NMANDY-YLTKPLDLVEGNI---SHSAETIAQIIPFLSSAKILKL 351
            M+  Y  LT+PL L E ++   +   + +A ++  +S+ K+L L
Sbjct: 259 VMSTSYSLLTEPLSLTEAHLKLRNGVVQPVAPLVTCISNVKVLTL 303