BLASTX nr result

ID: Chrysanthemum22_contig00038564 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038564
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023772948.1| protein arv1 homolog [Lactuca sativa] >gi|13...    55   1e-06
ref|XP_022005996.1| protein arv1 homolog [Helianthus annuus] >gi...    54   5e-06

>ref|XP_023772948.1| protein arv1 homolog [Lactuca sativa]
 gb|PLY78443.1| hypothetical protein LSAT_2X88861 [Lactuca sativa]
          Length = 236

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -3

Query: 71 MNYRCVQCGHHIKTLYVQYSPGN 3
          MN+RCVQCGHHIKTLYVQYSPGN
Sbjct: 1  MNFRCVQCGHHIKTLYVQYSPGN 23


>ref|XP_022005996.1| protein arv1 homolog [Helianthus annuus]
 gb|OTF99245.1| putative arv1-like protein [Helianthus annuus]
          Length = 235

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = -3

Query: 71 MNYRCVQCGHHIKTLYVQYSPGN 3
          MN+RCVQCGHHIK+LYVQYSPGN
Sbjct: 1  MNFRCVQCGHHIKSLYVQYSPGN 23


Top