BLASTX nr result

ID: Chrysanthemum22_contig00038311 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038311
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021969354.1| 33 kDa ribonucleoprotein, chloroplastic [Hel...    60   4e-08
ref|XP_017234731.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    55   2e-06
ref|XP_015896880.1| PREDICTED: RNA-binding protein CP33, chlorop...    54   5e-06
ref|XP_011082360.1| 29 kDa ribonucleoprotein, chloroplastic [Ses...    54   5e-06
emb|CDP13040.1| unnamed protein product [Coffea canephora]             54   6e-06

>ref|XP_021969354.1| 33 kDa ribonucleoprotein, chloroplastic [Helianthus annuus]
 gb|OTG22078.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 270

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -1

Query: 308 TKEEAESAVSTLNGKDLLGRPIILKFSEKSSDKS 207
           +KE AESAVSTLNGK+LLGRPIILKFSEKSSD S
Sbjct: 220 SKETAESAVSTLNGKELLGRPIILKFSEKSSDNS 253


>ref|XP_017234731.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Daucus
           carota subsp. sativus]
 gb|KZN07419.1| hypothetical protein DCAR_008256 [Daucus carota subsp. sativus]
          Length = 282

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 308 TKEEAESAVSTLNGKDLLGRPIILKFSEKSSDKS 207
           T+EEAE+A+S LNGK+LLGRPI LKFSEKS D+S
Sbjct: 234 TREEAETAISDLNGKELLGRPIALKFSEKSIDES 267


>ref|XP_015896880.1| PREDICTED: RNA-binding protein CP33, chloroplastic [Ziziphus
           jujuba]
          Length = 282

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 32/34 (94%)
 Frame = -1

Query: 308 TKEEAESAVSTLNGKDLLGRPIILKFSEKSSDKS 207
           T+EEAE A+STL+GK+L+GRP+ LKFSEK++DKS
Sbjct: 236 TREEAEEAISTLDGKELMGRPLRLKFSEKNTDKS 269


>ref|XP_011082360.1| 29 kDa ribonucleoprotein, chloroplastic [Sesamum indicum]
          Length = 297

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 308 TKEEAESAVSTLNGKDLLGRPIILKFSEKSSDKS 207
           TKEEAESA+S L+GK+LLGRPI LKFSEK++D S
Sbjct: 238 TKEEAESAISALDGKELLGRPIRLKFSEKNTDAS 271


>emb|CDP13040.1| unnamed protein product [Coffea canephora]
          Length = 289

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 308 TKEEAESAVSTLNGKDLLGRPIILKFSEKSSDKS 207
           TKEEAE+A+S+L GK+LLGRPI LKFS+K+ DKS
Sbjct: 241 TKEEAEAAISSLEGKELLGRPIKLKFSQKNDDKS 274


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