BLASTX nr result

ID: Chrysanthemum22_contig00038215 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038215
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023738842.1| uncharacterized protein LOC111886828 [Lactuc...    52   8e-06

>ref|XP_023738842.1| uncharacterized protein LOC111886828 [Lactuca sativa]
          Length = 120

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
 Frame = -1

Query: 197 SNAES--SHGRRRSNVTNQVPHDPSKRTMITLDGGR-FT--ATTIRMIIYFFKNMFNGSW 33
           +NAES  S   R SN+  QVP +PSKR  I +D  + FT   + IR I    K MF+G W
Sbjct: 31  NNAESQPSSSVRGSNILEQVPSNPSKRKFIEVDSEKEFTDQISVIRAITCILKTMFDGPW 90

Query: 32  TTWNEVNK 9
           T+W +V+K
Sbjct: 91  TSWKKVDK 98


Top