BLASTX nr result

ID: Chrysanthemum22_contig00038122 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038122
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021999123.1| RING-H2 finger protein ATL46-like [Helianthu...    87   3e-17
ref|XP_023739096.1| RING-H2 finger protein ATL46-like [Lactuca s...    85   2e-16
gb|KVH97803.1| hypothetical protein Ccrd_000096 [Cynara carduncu...    84   4e-16
ref|XP_022023276.1| RING-H2 finger protein ATL46-like [Helianthu...    68   4e-10
ref|XP_023740290.1| RING-H2 finger protein ATL46-like [Lactuca s...    60   1e-07

>ref|XP_021999123.1| RING-H2 finger protein ATL46-like [Helianthus annuus]
          Length = 348

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 45/54 (83%), Positives = 49/54 (90%), Gaps = 2/54 (3%)
 Frame = -3

Query: 158 PTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTS--SHFQS 3
           PT+SKTN TVLFARNIIIVIA MFFICGLLHLLV+YL+KRK+LLS S  SHFQS
Sbjct: 21  PTNSKTNETVLFARNIIIVIAFMFFICGLLHLLVKYLIKRKKLLSLSSNSHFQS 74


>ref|XP_023739096.1| RING-H2 finger protein ATL46-like [Lactuca sativa]
 gb|PLY96920.1| hypothetical protein LSAT_4X7081 [Lactuca sativa]
          Length = 353

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -3

Query: 155 TSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQS 3
           T SKTNST+LFARNIIIVIAVMFFICGLLHLLVRYL+KRKR  S++SHFQS
Sbjct: 21  TDSKTNSTLLFARNIIIVIAVMFFICGLLHLLVRYLIKRKR--SSNSHFQS 69


>gb|KVH97803.1| hypothetical protein Ccrd_000096 [Cynara cardunculus var. scolymus]
          Length = 379

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 43/54 (79%), Positives = 50/54 (92%), Gaps = 3/54 (5%)
 Frame = -3

Query: 155 TSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLL---STSSHFQS 3
           ++SKT+ST LFARNIIIVIA+MFFICGLLH+LVRYLMKRKRLL   S++SHFQS
Sbjct: 28  SNSKTSSTFLFARNIIIVIAIMFFICGLLHILVRYLMKRKRLLLSSSSNSHFQS 81


>ref|XP_022023276.1| RING-H2 finger protein ATL46-like [Helianthus annuus]
 gb|OTF88179.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 492

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 7/60 (11%)
 Frame = -3

Query: 164 SNP-TSSKTNSTVLFAR--NIIIVIAVMFFICGLLHLLVRYLMKRKRLL----STSSHFQ 6
           +NP  +SK NST LF R   I+IVIAVMF ICGLLHLLV+YL+K+KRLL    S++SHFQ
Sbjct: 15  TNPHINSKNNSTFLFVRIRTIVIVIAVMFVICGLLHLLVKYLIKKKRLLLLLSSSNSHFQ 74


>ref|XP_023740290.1| RING-H2 finger protein ATL46-like [Lactuca sativa]
 gb|PLY68872.1| hypothetical protein LSAT_3X48000 [Lactuca sativa]
          Length = 333

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = -3

Query: 164 SNPTSSKTNSTVLFARNIIIVIAVMFFICGLLHLLVRYLMKRKRLLSTSSHFQS 3
           S P++ K +S+++FARN +IV+ V+F +C LLH L RYLMK+KR  S+SS   S
Sbjct: 17  SPPSNHKPHSSIIFARNSVIVLGVVFVVCCLLHFLARYLMKKKRSSSSSSSSNS 70


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