BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00038064
         (744 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo...   252   1e-76
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   261   1e-76
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   232   2e-66
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   227   2e-64
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   219   9e-62
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   219   9e-62
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         218   2e-61
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     218   3e-61
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          216   3e-61
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     217   5e-61
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     217   5e-61
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   217   5e-61
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     216   2e-60
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   213   1e-59
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   213   2e-59
dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subt...   211   2e-59
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   205   2e-59
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   210   2e-58
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   197   3e-58
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   209   3e-58

>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 595

 Score =  252 bits (643), Expect = 1e-76
 Identities = 130/250 (52%), Positives = 172/250 (68%), Gaps = 11/250 (4%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEE------GASEKVEHVAKQ 162
            GVKGYRIWSPSE++VILSRDV FDE HLF  K +   +          G  E +    + 
Sbjct: 303  GVKGYRIWSPSEKKVILSRDVIFDESHLFHPKLEVPITATHNSHPPQVGKVESISEKTED 362

Query: 163  VDVEHEVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALD-----RPRRDAKAPSRFGFQDY 327
             D+  +  E +  +    +   N +H ++ +  SI L+     +P+R  K P R+GF+D 
Sbjct: 363  KDLLDKFSEASQEEEQSENSSANESH-QNAEPDSIQLNPGISQKPKRVIKPPERYGFEDM 421

Query: 328  AAYALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVI 507
            A YAL  AEE++S EP TY+EAI+  +++ W  AM EE+ESL+KN TW LV+LP+GR V+
Sbjct: 422  ATYALHAAEEIDSDEPTTYKEAISHPEAEKWILAMREEMESLYKNQTWKLVELPKGRHVV 481

Query: 508  GCKWVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHH 687
            GCKW++KKK   S  + IR+KARLVAKGFSQKEG+D+NEIFSPVVRHTSIRVLL++VA+ 
Sbjct: 482  GCKWIYKKKSIFSEKEEIRYKARLVAKGFSQKEGVDFNEIFSPVVRHTSIRVLLAIVANQ 541

Query: 688  DLELEQLDVK 717
            D+ELEQLDVK
Sbjct: 542  DMELEQLDVK 551


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  261 bits (668), Expect = 1e-76
 Identities = 132/240 (55%), Positives = 175/240 (72%), Gaps = 1/240 (0%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDVEHE 180
            GVKG+RIWSP+E+RVI+SR+V FDE  L R       +       ++VE    Q + + +
Sbjct: 668  GVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEFQVIQNESDLK 727

Query: 181  VPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRR-DAKAPSRFGFQDYAAYALQVAEE 357
             PE+ D +     D P S  +  + ++SIA DRPRR   + P+R+GF+D   YALQVAEE
Sbjct: 728  EPEEEDQEPQTETDIPES--MPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEE 785

Query: 358  VESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKKKP 537
            V++ EP+TY+EAI S DS+ W AAM +E+ESLHKN TW LV  P GRK+I CKWVFKKK 
Sbjct: 786  VDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKE 845

Query: 538  SLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLDVK 717
             +S ++ +++KAR+VA+GF+Q+EG+DYNEIFSPVVRHTSIRVLL++VAH +LELEQLDVK
Sbjct: 846  GISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVK 905


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  232 bits (591), Expect = 2e-66
 Identities = 128/244 (52%), Positives = 166/244 (68%), Gaps = 7/244 (2%)
 Frame = +1

Query: 7    KGYRIW--SPSERRVILSRDVTFDEDHLFRL-KQDSVESKLE---EGASEKVEHVAKQVD 168
            KGYR+W      RR+ILSRDVTF+ED L    KQ SV S      +G SEKVE   K V 
Sbjct: 383  KGYRLWCSESKSRRLILSRDVTFNEDALLSSGKQSSVSSSSTNNLQGTSEKVELELKSVA 442

Query: 169  VEHEVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAYALQV 348
               +VP  +  + + +DD  +   ++ ++  +IA DR RR  K P+R+   +  AYAL +
Sbjct: 443  PNVDVPSSSTTE-SSIDDHGDDHPIQQQEEYNIARDRTRRQIKLPARYTDDNLTAYALSI 501

Query: 349  AEEV-ESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVF 525
            A+EV + +EPA+Y EA++  DS  W  AM+EEIESLHKNNTW L KLP+G++ + CKW++
Sbjct: 502  AQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTKLPKGKRPLRCKWIY 561

Query: 526  KKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQ 705
            KKK  +   ++ R KARLV KGF QKEGID+NEIFSPVVRHTSIR+LL+ VA  DLELEQ
Sbjct: 562  KKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQ 621

Query: 706  LDVK 717
            LDVK
Sbjct: 622  LDVK 625


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  227 bits (578), Expect = 2e-64
 Identities = 121/245 (49%), Positives = 167/245 (68%), Gaps = 6/245 (2%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 897  GVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISS----G 952

Query: 178  EVPEDTDHDVT---PLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQ 345
              PE  D  +    P+ +  NS+ ++    RSIA DRP+R+ K P R+  + +  AYAL 
Sbjct: 953  HAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALS 1012

Query: 346  VAEEVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWV 522
            VAEE+E + EP+TY EAI S D + W  AM +E+ESL KN+TW LVKLP+ +K I CKW+
Sbjct: 1013 VAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWI 1072

Query: 523  FKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELE 702
            FK+K  +SSSD  R+KARL+AKG+SQ  GID+N++FSPVV+H+SIR LLS+VA HD ELE
Sbjct: 1073 FKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELE 1132

Query: 703  QLDVK 717
            Q+DVK
Sbjct: 1133 QMDVK 1137


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  219 bits (559), Expect = 9e-62
 Identities = 122/247 (49%), Positives = 162/247 (65%), Gaps = 8/247 (3%)
 Frame = +1

Query: 1    GVKGYRIWSPS--ERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEH-VAKQVDV 171
            GVKGYR+W P     + I+SRDVTFDE  + R    +  S+ +E +    +H V KQV+ 
Sbjct: 1197 GVKGYRLWCPDPVSSKFIISRDVTFDESSMLR---STTNSREKEESDRMGDHGVEKQVEC 1253

Query: 172  EHEVPEDTD-----HDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAY 336
            + + P  T+      D   + D       + + Y SIA  R +R  K   R+   +  ++
Sbjct: 1254 QVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPY-SIATGRTKRQIKPNPRYA--NLVSF 1310

Query: 337  ALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCK 516
            AL VAE +  +EP++Y EA+T  +S  W+ AMSEEIESLHKN+TW LVK P  +K++GCK
Sbjct: 1311 ALSVAESI-GIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCK 1369

Query: 517  WVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLE 696
            WVFKKK  +   +  RFKARLVAKGF+QKEGIDYNE+FSPVV+H+SIRVLL++VA  DLE
Sbjct: 1370 WVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLE 1429

Query: 697  LEQLDVK 717
            LEQLDVK
Sbjct: 1430 LEQLDVK 1436


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  219 bits (559), Expect = 9e-62
 Identities = 122/247 (49%), Positives = 162/247 (65%), Gaps = 8/247 (3%)
 Frame = +1

Query: 1    GVKGYRIWSPS--ERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEH-VAKQVDV 171
            GVKGYR+W P     + I+SRDVTFDE  + R    +  S+ +E +    +H V KQV+ 
Sbjct: 1176 GVKGYRLWCPDPVSSKFIISRDVTFDESSMLR---STTNSREKEESDRMGDHGVEKQVEC 1232

Query: 172  EHEVPEDTD-----HDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAY 336
            + + P  T+      D   + D       + + Y SIA  R +R  K   R+   +  ++
Sbjct: 1233 QVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPY-SIATGRTKRQIKPNPRYA--NLVSF 1289

Query: 337  ALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCK 516
            AL VAE +  +EP++Y EA+T  +S  W+ AMSEEIESLHKN+TW LVK P  +K++GCK
Sbjct: 1290 ALSVAESI-GIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCK 1348

Query: 517  WVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLE 696
            WVFKKK  +   +  RFKARLVAKGF+QKEGIDYNE+FSPVV+H+SIRVLL++VA  DLE
Sbjct: 1349 WVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLE 1408

Query: 697  LEQLDVK 717
            LEQLDVK
Sbjct: 1409 LEQLDVK 1415


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  218 bits (554), Expect = 2e-61
 Identities = 114/242 (47%), Positives = 163/242 (67%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            G+KGY++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 472  GMKGYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPE 531

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + DV  ++D  +S  ++    R IA D+P+R+ K P R+  + +  AYAL VAE
Sbjct: 532  KENVAINQDVPVIEDSDSST-VQQSPKRFIAKDKPKRNTKPPQRYIEEANIVAYALSVAE 590

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            ++E + EP+TY EAI S D + W  AM +E+ESL KN+TW LVKLP+ +K I CKW+FK+
Sbjct: 591  DIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKR 650

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD   +KARLVAKG+SQ  GID+N++FSPVV+H+SIR LLS+VA HD ELEQ+D
Sbjct: 651  KKGISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 710

Query: 712  VK 717
            VK
Sbjct: 711  VK 712


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  218 bits (555), Expect = 3e-61
 Identities = 115/242 (47%), Positives = 164/242 (67%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVK Y++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 569  GVKDYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPE 628

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D + ++D  +SA ++    RSIA D+P+R+ K P R+  + +  AYAL VAE
Sbjct: 629  KEDVAINQDASVIEDSDSSA-VQQSPKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAE 687

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            E+E + EP+TY EAI S   + W  AM +E+ESL KN+TW LVKLP+ +K I CKW+FK+
Sbjct: 688  EIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKR 747

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ  GID+N++FSPV++H+SIR LLS+VA HD ELEQ+D
Sbjct: 748  KKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMD 807

Query: 712  VK 717
            VK
Sbjct: 808  VK 809


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  216 bits (550), Expect = 3e-61
 Identities = 117/253 (46%), Positives = 161/253 (63%), Gaps = 14/253 (5%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDVEHE 180
            GVKG+++W P  ++++LSRDV FDE   F LKQ S E+++ E A         QV++E  
Sbjct: 601  GVKGFKLWDPVSKKMVLSRDVVFDEQ--FMLKQ-SRETEVTESAGGSSGKEVIQVELE-- 655

Query: 181  VPEDTDHDVTPLDDPPNSAHLEHEQYRS--------------IALDRPRRDAKAPSRFGF 318
             P    +       PP    + H+   S              +A DR RR    P R+GF
Sbjct: 656  -PTPNKNTSAVHQQPPEPTPINHDTADSGGASEDSVGVDDYQLARDRERRSINPPQRYGF 714

Query: 319  QDYAAYALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGR 498
            +D AAYAL  +    S +P+T++EAI S++ D W  AM EE+ESL KN TW LV+LP G+
Sbjct: 715  EDLAAYALLTS----SGDPSTFREAIVSQEKDKWMGAMMEEMESLQKNQTWELVQLPMGK 770

Query: 499  KVIGCKWVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLV 678
            + IGCKWV+K+K +++  +  +FKARLVAKG+SQ++GIDY+EIFSPVVRHTSIR +L+LV
Sbjct: 771  RTIGCKWVYKRKSAVTEKEGEKFKARLVAKGYSQQKGIDYDEIFSPVVRHTSIRAVLALV 830

Query: 679  AHHDLELEQLDVK 717
            A  D+ LEQ+DVK
Sbjct: 831  ASRDMHLEQMDVK 843


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  217 bits (553), Expect = 5e-61
 Identities = 114/242 (47%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E  S +VEH+        
Sbjct: 599  GVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVPVESQEKVSVQVEHLISSGHAPE 658

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D   ++D  +S  ++    RSIA DRP+R+ K P R+  + +  AYAL VAE
Sbjct: 659  KEDVAINQDAPVIEDSDSSI-VQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAE 717

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            E+E + EP+TY +AI S D + W  AM +E+ESL KN++W L KLP+ +K I CKW+FK+
Sbjct: 718  EIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKR 777

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ  GID+N++FSPVV+H+SIR LLS+VA HD ELEQ+D
Sbjct: 778  KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 837

Query: 712  VK 717
            VK
Sbjct: 838  VK 839


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  217 bits (553), Expect = 5e-61
 Identities = 113/242 (46%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 725  GVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPE 784

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D   ++D  +S  ++    RSIA D+P+R+ K P R+  + +  AYAL VAE
Sbjct: 785  KENVAINQDAPVIEDSDSSI-VQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAE 843

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            E+E + EP+TY EAI S D + W  AM +E+ESL KN+TW  VKLP+ +K I CKW+FK+
Sbjct: 844  EIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKR 903

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ  GID+N++FSP+++H+SIR LL +VA HD ELEQ+D
Sbjct: 904  KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963

Query: 712  VK 717
            VK
Sbjct: 964  VK 965


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  217 bits (553), Expect = 5e-61
 Identities = 113/242 (46%), Positives = 162/242 (66%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 725  GVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPE 784

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D   ++D  +S  ++    RSIA D+P+R+ K P R+  + +  AYAL VAE
Sbjct: 785  KENVAINQDAPVIEDSDSSI-VQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAE 843

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            E+E + EP+TY EAI S D + W  AM +E+ESL KN+TW  VKLP+ +K I CKW+FK+
Sbjct: 844  EIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKR 903

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ  GID+N++FSP+++H+SIR LL +VA HD ELEQ+D
Sbjct: 904  KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963

Query: 712  VK 717
            VK
Sbjct: 964  VK 965


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  216 bits (549), Expect = 2e-60
 Identities = 114/242 (47%), Positives = 161/242 (66%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E AS +VEH+        
Sbjct: 662  GVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPE 721

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D   ++D  +S  +     RSIA D+P+R+ K P R+  +    AYAL VAE
Sbjct: 722  KEDVAINQDAPVIEDSDSSI-VHQSPKRSIAKDKPKRNIKPPRRYIEEAKIVAYALSVAE 780

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            ++E + EP+TY EAI S D + W  AM +E+ESL KN+TW LVKLP+ +K I CKW+FK+
Sbjct: 781  KIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKR 840

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ  GID+N++FSPVV+H+SIR LL +VA HD ELEQ++
Sbjct: 841  KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMN 900

Query: 712  VK 717
            VK
Sbjct: 901  VK 902


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  213 bits (541), Expect = 1e-59
 Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 3/242 (1%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDS-VESKLEEGASEKVEHVAKQVDVEH 177
            GVKGY++W P  ++V++SR+V F E  +   K  + V  + +E  S +VEH+        
Sbjct: 432  GVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKTSVQVEHLISSGHAPE 491

Query: 178  EVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQ-DYAAYALQVAE 354
            +     + D   + D  +S  +     RSIA D+P+R+ K P R+  + +  AYAL VAE
Sbjct: 492  KEDVAINQDAPVIQDSDSSI-VHQSPKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAE 550

Query: 355  EVE-SLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKK 531
            E+E + EP+ Y EAI S D + W   M +E+ESL KN+TW LVKLP+ +K I CKW+FK+
Sbjct: 551  EIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKR 610

Query: 532  KPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLD 711
            K  +S SD  R+KARLVAKG+SQ   ID+N++FSP+V+H+SIR LLS+VA HD ELEQ+D
Sbjct: 611  KEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMD 670

Query: 712  VK 717
            VK
Sbjct: 671  VK 672


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  213 bits (542), Expect = 2e-59
 Identities = 116/244 (47%), Positives = 157/244 (64%), Gaps = 5/244 (2%)
 Frame = +1

Query: 1    GVKGYRIW--SPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASE---KVEHVAKQV 165
            GVKGY++W  +  + + I+SRDVTF+E  + +       +K  EG  +   +VEH   Q 
Sbjct: 648  GVKGYKLWIETQGKGKCIISRDVTFNEQDMSK----QTPAKDVEGLDQLQFEVEHETLQP 703

Query: 166  DVEHEVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAYALQ 345
            +   E    T  +   + +  N      E Y ++  DR +R  K P R+G  +  A+AL 
Sbjct: 704  EKSKETSSKTAQEEI-VHERQNEPTQGLESY-NLVRDRQKRQVKPPKRYGQAEMTAFALS 761

Query: 346  VAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVF 525
            VAEE+  +EP TYQEAI S ++D W  A+ EE++SL KN TW LV  P+ RKV+G KWVF
Sbjct: 762  VAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVF 821

Query: 526  KKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQ 705
            K+K     ++  R+KARLVAKGFSQKEG+DYNEIFSPVV+H+SIR+LL+ VAH DLEL+Q
Sbjct: 822  KRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQ 881

Query: 706  LDVK 717
            LDVK
Sbjct: 882  LDVK 885


>dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subterraneum]
          Length = 887

 Score =  211 bits (538), Expect = 2e-59
 Identities = 114/251 (45%), Positives = 162/251 (64%), Gaps = 13/251 (5%)
 Frame = +1

Query: 4    VKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDVE--- 174
            +KG+++W P  ++++LSRDV FDE   F LKQ  V     E A       A QV++E   
Sbjct: 347  LKGFKLWDPVSKKMVLSRDVVFDEQ--FMLKQPEVT----ESAGGSPHKEAIQVEIEPTP 400

Query: 175  -------HEVPEDT---DHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQD 324
                   H+ P +T   ++D   L         EH+    +  DR RR  K P R+G++D
Sbjct: 401  TNNIPQVHQQPPETIITNNDTEVLGGATGELAGEHDY--QLVRDRERRSVKPPERYGYED 458

Query: 325  YAAYALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKV 504
             AAYAL  +    S +P+T++EA+ S++ + W  AM EE+ESL KN TW LV+LP+G++V
Sbjct: 459  LAAYALLTS----SGDPSTFREAMASQEKERWMGAMMEEMESLQKNQTWELVQLPKGKRV 514

Query: 505  IGCKWVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAH 684
            IGCKWV+K+KP+++  +  +FKARLVAKG+SQ++ IDY+EIF PVVRHTSIR +L+LVA 
Sbjct: 515  IGCKWVYKRKPAVTEKEGEKFKARLVAKGYSQQKRIDYDEIFFPVVRHTSIRAVLALVAS 574

Query: 685  HDLELEQLDVK 717
             D+ LEQ+DVK
Sbjct: 575  RDMHLEQMDVK 585



 Score =  111 bits (278), Expect = 3e-24
 Identities = 54/97 (55%), Positives = 72/97 (74%)
 Frame = +1

Query: 430 MSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKKKPSLSSSDNIRFKARLVAKGFSQKEG 609
           M+EE++SL KNNTW LV  P G+K++GC+WV+  K  +  +   RFKARLVAKG++Q  G
Sbjct: 1   MNEEMKSLKKNNTWELVDCPPGKKIVGCRWVYTVKYKVDGTIE-RFKARLVAKGYTQTYG 59

Query: 610 IDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLDVKN 720
           +DY EIF+PV +  +IRVLLSL A+ D  L+Q DVKN
Sbjct: 60  VDYTEIFAPVAKVNTIRVLLSLAANFDWLLQQFDVKN 96


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  205 bits (522), Expect = 2e-59
 Identities = 113/248 (45%), Positives = 157/248 (63%), Gaps = 9/248 (3%)
 Frame = +1

Query: 1   GVKGYRIWSPSERR---VILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDV 171
           GVKGYR+W     R   +++SRDVTF+E  +F  K++     +E  A  K  +      V
Sbjct: 69  GVKGYRLWCTENNRTKKIVISRDVTFNESAMFGQKEE-----VENLAGNKSTNKGVHQKV 123

Query: 172 EHEVPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGF------QDYAA 333
           E EV +    ++ P++   N      E+ +SIA  R RR+ + P+R+         +  A
Sbjct: 124 EFEVEDSNKENLNPVEQSSNV----QEEPQSIATRRTRREIRKPTRYADVTNVVDTNSVA 179

Query: 334 YALQVAEEVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGC 513
           YAL V E ++S EP +Y+EAI SK++  W  AM EE++SL KN TW LV LP G K +GC
Sbjct: 180 YALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPVGC 239

Query: 514 KWVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDL 693
           KWV K+K  +   +  RFKARLVAKGFSQKEGIDY+E+FSPVV+H +IRVLL++V+  D+
Sbjct: 240 KWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAMVSALDM 299

Query: 694 ELEQLDVK 717
           +LEQL+VK
Sbjct: 300 KLEQLNVK 307


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  210 bits (534), Expect = 2e-58
 Identities = 115/241 (47%), Positives = 156/241 (64%), Gaps = 2/241 (0%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDVEHE 180
            GVKGY++W  S  + ++SRDVTFDE  +   ++ S+E    E          +QV++  E
Sbjct: 1261 GVKGYKLWCLSLLKFVVSRDVTFDESSILDPRKVSMELSRNENN--------EQVELPVE 1312

Query: 181  VPEDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAYALQVA--E 354
            + +  D + T  D+  ++  L   +  +IA  R +R  + P R   Q+       VA  E
Sbjct: 1313 LTKKRDQE-TQSDESKDAEELASNEPYTIAKGRDKRRIRKPERLIEQENLIAQAFVAAEE 1371

Query: 355  EVESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKKK 534
            E++ LEP++Y EA + KD+  W  AM EE+ESLH+N TW LVK P+G + +GCKWV+KKK
Sbjct: 1372 EIKDLEPSSYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKK 1431

Query: 535  PSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLDV 714
              +   +  RFKARLVAKGFSQKEGIDYNEIFSPVV+H+SIRVLL+LVA  DLEL+QLDV
Sbjct: 1432 EGIPEVEAARFKARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLALVAQFDLELQQLDV 1491

Query: 715  K 717
            K
Sbjct: 1492 K 1492


>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  197 bits (500), Expect = 3e-58
 Identities = 106/231 (45%), Positives = 152/231 (65%), Gaps = 4/231 (1%)
 Frame = +1

Query: 37  RRVILSRDVTFDEDHLFRLKQDSVESKLEEGASEKVEHVAKQVDVEHEVPEDTDHDVT-- 210
           ++VI SRDVTFDE  +  + + + ++K  EGAS++VE   K +    E  E+T+ D    
Sbjct: 3   KKVIFSRDVTFDESAM--VNKVTEDTKQNEGASKQVEFEGKFIFPTQEADEETNEDYPLE 60

Query: 211 --PLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQDYAAYALQVAEEVESLEPATY 384
             P+++ P       +Q  SIA  RP+R    P R   +  A     VA++V    P TY
Sbjct: 61  GEPVEEIPTQE--PQQQLESIATSRPKRTITKPVRL-IETVACATSIVADDV----PTTY 113

Query: 385 QEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEGRKVIGCKWVFKKKPSLSSSDNIR 564
           ++A+ S + D W  AM+EE++SL++N+TW L  LP+G+K IGCKWVF KK    +  ++R
Sbjct: 114 KDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWVFAKKEGFPNQVDVR 173

Query: 565 FKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSLVAHHDLELEQLDVK 717
           +KARLVAKG++QKEGIDYNE+FSPVV+H+SIR++L+LVA  DLEL Q+DVK
Sbjct: 174 YKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQLDLELVQMDVK 224


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  209 bits (533), Expect = 3e-58
 Identities = 119/254 (46%), Positives = 162/254 (63%), Gaps = 15/254 (5%)
 Frame = +1

Query: 1    GVKGYRIWSPSERRVILSRDVTFDEDHLFRLKQDSVESKLEEG----ASEKVEHVAKQVD 168
            GVKGYR++ P  R++  SR+VTF+E+ +    +D+V    + G      EKVE   +   
Sbjct: 334  GVKGYRLYDPESRKIFHSRNVTFNENGMLSSGKDTVVPSTDTGDQEDVREKVEFETEAPI 393

Query: 169  VEHEVP--------EDTDHDVTPLDDPPNSAHLEHEQYRSIALDRPRRDAKAPSRFGFQD 324
            +E  +P        E T   ++P   PP    L   Q  S+A + P++  + P++    +
Sbjct: 394  LETNIPNSSTTQEDEVTAEQMSPRQHPPQRRGLP--QPWSMAQELPQQRPRKPTQRLITE 451

Query: 325  YA--AYALQVAEEV-ESLEPATYQEAITSKDSDMWSAAMSEEIESLHKNNTWALVKLPEG 495
             A  AYAL VA+E+ E  EP  Y EAI+  DS  W+AAM EE+ESL KN TW LV LPEG
Sbjct: 452  SANIAYALTVAQEMGEDGEPKNYSEAISGDDSAKWTAAMQEEVESLLKNETWDLVMLPEG 511

Query: 496  RKVIGCKWVFKKKPSLSSSDNIRFKARLVAKGFSQKEGIDYNEIFSPVVRHTSIRVLLSL 675
            ++VI CKW+FK+K  +   +N R+KAR V +GF Q+EGID+NE+FSPVVRH+SIRVLL+L
Sbjct: 512  KRVISCKWIFKRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVRHSSIRVLLAL 571

Query: 676  VAHHDLELEQLDVK 717
            VA +DLELEQLDVK
Sbjct: 572  VALYDLELEQLDVK 585