BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00037854
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022006171.1| putative ribosomal large subunit pseudouridi...    67   1e-10
gb|KVI09700.1| Pseudouridine synthase, catalytic domain-containi...    58   3e-07
ref|XP_004140075.1| PREDICTED: uncharacterized protein LOC101218...    54   5e-06
ref|XP_023734676.1| putative ribosomal large subunit pseudouridi...    54   6e-06
ref|XP_016901969.1| PREDICTED: ribosomal large subunit pseudouri...    54   8e-06
ref|XP_008456519.1| PREDICTED: uncharacterized RNA pseudouridine...    54   8e-06

>ref|XP_022006171.1| putative ribosomal large subunit pseudouridine synthase SVR1,
           chloroplastic [Helianthus annuus]
 gb|OTF99436.1| putative pseudouridine synthase, RluC/RluD [Helianthus annuus]
          Length = 355

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 11/62 (17%)
 Frame = -2

Query: 154 PWITR----TRHLHVIAETG--TRKKPTS-----EQPRYSKAARRFYNENFKESCSQRLS 8
           PWI +     RHLHV A     T+KKP S      +PRYSKAARRFYNENFKES SQRLS
Sbjct: 48  PWIQQHTHSPRHLHVTAAVNSPTKKKPKSTKELTSEPRYSKAARRFYNENFKESSSQRLS 107

Query: 7   KV 2
           KV
Sbjct: 108 KV 109


>gb|KVI09700.1| Pseudouridine synthase, catalytic domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 368

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 13/63 (20%)
 Frame = -2

Query: 151 WI---TRTRHLHVIAETGTRKKPTSE----------QPRYSKAARRFYNENFKESCSQRL 11
           WI   +  R  HV+A+    + PT +          +PRYSKAARRFYNENF+ES SQRL
Sbjct: 60  WIEDASSVRLFHVMADASAVRSPTQKKVRSNKVLTSEPRYSKAARRFYNENFRESSSQRL 119

Query: 10  SKV 2
           SKV
Sbjct: 120 SKV 122


>ref|XP_004140075.1| PREDICTED: uncharacterized protein LOC101218211 [Cucumis sativus]
          Length = 398

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 21/72 (29%)
 Frame = -2

Query: 154 PWITR-------------TRHLHVIAETGTRKK--------PTSEQPRYSKAARRFYNEN 38
           PWI R             TR LH ++E  T+ K        P +E P++SKAARRFYNEN
Sbjct: 83  PWIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVSAGKPITEPPKHSKAARRFYNEN 142

Query: 37  FKESCSQRLSKV 2
            +ES SQRLSKV
Sbjct: 143 IRES-SQRLSKV 153


>ref|XP_023734676.1| putative ribosomal large subunit pseudouridine synthase SVR1,
           chloroplastic [Lactuca sativa]
 gb|PLY73139.1| hypothetical protein LSAT_2X113040 [Lactuca sativa]
          Length = 374

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 16/61 (26%)
 Frame = -2

Query: 136 RHLHVIAETGTRKKPTSE----------------QPRYSKAARRFYNENFKESCSQRLSK 5
           R LHV+A+      P  +                +PRYSKAARRFYNENFKE+ SQRLSK
Sbjct: 68  RILHVMADASAVNSPAEKKLRSSRGLRSTRELTSEPRYSKAARRFYNENFKETSSQRLSK 127

Query: 4   V 2
           V
Sbjct: 128 V 128


>ref|XP_016901969.1| PREDICTED: ribosomal large subunit pseudouridine synthase B isoform
           X2 [Cucumis melo]
          Length = 377

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 21/72 (29%)
 Frame = -2

Query: 154 PWITR-------------TRHLHVIAETGTRKK--------PTSEQPRYSKAARRFYNEN 38
           PWI R             TR LH ++E  T+ K        P +E P++SKAARRFYNEN
Sbjct: 81  PWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAGKPITEPPKHSKAARRFYNEN 140

Query: 37  FKESCSQRLSKV 2
            +ES SQRLSKV
Sbjct: 141 IRES-SQRLSKV 151


>ref|XP_008456519.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform X1 [Cucumis melo]
          Length = 396

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 21/72 (29%)
 Frame = -2

Query: 154 PWITR-------------TRHLHVIAETGTRKK--------PTSEQPRYSKAARRFYNEN 38
           PWI R             TR LH ++E  T+ K        P +E P++SKAARRFYNEN
Sbjct: 81  PWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSAGKPITEPPKHSKAARRFYNEN 140

Query: 37  FKESCSQRLSKV 2
            +ES SQRLSKV
Sbjct: 141 IRES-SQRLSKV 151