BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00037594
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00272.1| Nuclear pore complex protein [Cynara cardunculus ...    61   2e-08

>gb|KVI00272.1| Nuclear pore complex protein [Cynara cardunculus var. scolymus]
          Length = 839

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 38/72 (52%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 99  ISFSGSQLNLSATASPALISSSKPEQ-XXXXXXXXXXXXXXXXXGVGGEINSSDQAVIQE 275
           I FSGSQLNLSAT SP L S+SK EQ                   VG E ++SD A+ QE
Sbjct: 503 IFFSGSQLNLSATNSPVLASNSKAEQPAVAPALSSSPAISNPVEEVGKENDNSDVALTQE 562

Query: 276 DDMEEEAPDTAQ 311
           D+MEEEAPDT Q
Sbjct: 563 DEMEEEAPDTTQ 574