BLASTX nr result

ID: Chrysanthemum22_contig00037367 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00037367
         (941 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    42   4e-06

>gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
           var. scolymus]
          Length = 349

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
 Frame = -1

Query: 323 NISTCLLSFYTILT-------RSSHALTSLPAISQELSSWDL 219
           N+S CL SFY+ +        RS H+L SLPAISQ LS WDL
Sbjct: 3   NLSACLPSFYSQMESFYISFIRSYHSLASLPAISQGLSWWDL 44



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 180 GLMN*ILTCLALPILNTCCEHGEACLS 100
           G+MN IL CL  P LNTCC++GE CL+
Sbjct: 56  GVMNSILPCL--PFLNTCCQNGEPCLA 80


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