BLASTX nr result

ID: Chrysanthemum22_contig00037366 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00037366
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    49   8e-08

>gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
           var. scolymus]
          Length = 349

 Score = 48.9 bits (115), Expect(2) = 8e-08
 Identities = 30/66 (45%), Positives = 36/66 (54%)
 Frame = -1

Query: 202 GLMN*FLTCLALPFLNTCCEHGEACLAISFSEXXXXXXXXXXXXXXXLVDLARLLHSCVQ 23
           G+MN  L CL  PFLNTCC++GE CLA+                   L+DLARLLH  V 
Sbjct: 56  GVMNSILPCL--PFLNTCCQNGEPCLAV--ISDLRLGLNVILFHHHDLLDLARLLHPYVH 111

Query: 22  QTFTYL 5
           Q F+ L
Sbjct: 112 QLFSCL 117



 Score = 35.0 bits (79), Expect(2) = 8e-08
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
 Frame = -2

Query: 345 NISTCLLSFYTILT-------RSSHALTSLPVISQELSCRDL 241
           N+S CL SFY+ +        RS H+L SLP ISQ LS  DL
Sbjct: 3   NLSACLPSFYSQMESFYISFIRSYHSLASLPAISQGLSWWDL 44