BLASTX nr result

ID: Chrysanthemum22_contig00037215 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00037215
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI03912.1| CO/COL/TOC1, conserved site-containing protein [C...    57   5e-07

>gb|KVI03912.1| CO/COL/TOC1, conserved site-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 304

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
 Frame = +3

Query: 3   KSKRKAESSACAS-LDAHLSQ---SQNQNEQIIRSLPCSPPPIRSPNTPNRYS 149
           KSKRKA + ACA+ +D +L+    + N +EQ  RS  CSPPP+R PNTPNR+S
Sbjct: 252 KSKRKAGAPACATTIDVYLNHQIGNHNLHEQSSRSATCSPPPVRPPNTPNRFS 304


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