BLASTX nr result
ID: Chrysanthemum22_contig00037197
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00037197
(499 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF99908.1| putative gag-polypeptide of LTR copia-type [Helia... 142 1e-36
gb|OTG22495.1| putative reverse transcriptase, RNA-dependent DNA... 139 4e-35
gb|OTF97228.1| putative gag-polypeptide of LTR copia-type [Helia... 137 1e-34
gb|OTF94209.1| putative ribonuclease H-like domain, Reverse tran... 137 3e-34
gb|OTG37431.1| putative ribonuclease H-like domain-containing pr... 132 1e-32
ref|XP_021980567.1| uncharacterized protein LOC110876714 [Helian... 131 2e-32
ref|XP_021986675.1| uncharacterized protein LOC110883152 [Helian... 128 4e-31
gb|OTG33444.1| putative ribonuclease H-like domain-containing pr... 127 6e-31
gb|OTF92045.1| putative ribonuclease H-like domain-containing pr... 125 3e-30
gb|OTG10849.1| putative reverse transcriptase, RNA-dependent DNA... 125 5e-30
gb|OTG28797.1| putative reverse transcriptase, RNA-dependent DNA... 123 2e-29
gb|OTG22467.1| putative reverse transcriptase, RNA-dependent DNA... 123 2e-29
gb|OTG17851.1| putative ribonuclease H-like domain-containing pr... 123 2e-29
gb|OTG29010.1| putative reverse transcriptase, RNA-dependent DNA... 122 6e-29
gb|OTG38120.1| putative reverse transcriptase, RNA-dependent DNA... 122 6e-29
gb|OTG09743.1| putative reverse transcriptase, RNA-dependent DNA... 121 8e-29
gb|OTG22197.1| putative gag-polypeptide of LTR copia-type [Helia... 120 1e-28
gb|OTG21088.1| putative ribonuclease H-like domain-containing pr... 121 1e-28
gb|OTG13854.1| putative ribonuclease H-like domain, Reverse tran... 120 1e-28
gb|OTG09173.1| putative reverse transcriptase, RNA-dependent DNA... 120 3e-28
>gb|OTF99908.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 615
Score = 142 bits (359), Expect = 1e-36
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L ++DKFSS AEK VL+GYSNF+KGYKL+SL+ K+ FSRDV
Sbjct: 403 KPSLLHLRNFGCLCFSTVLHDSDKFSSNAEKCVLIGYSNFKKGYKLWSLDSKKVFFSRDV 462
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDTPNDDITHSDHHE--SEGSP 358
+F+ENVFPF+IK + ++ LNH NFFD + + S+ PND+ + H+ +EG
Sbjct: 463 KFYENVFPFQIKNFDNQESVYNKQLNHANFFDNILSEVSNIPNDEEGANGSHDPANEGQQ 522
Query: 359 SLHLGSPTIDHEQGVLEHSDGSNEVTSTSELAATPLGVSNSEG 487
L S ++ +Q E S G + + + + SEG
Sbjct: 523 PLP-PSTSVPVQQSEQEGSSGLDADVMADHITGLNVETNQSEG 564
>gb|OTG22495.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1125
Score = 139 bits (351), Expect = 4e-35
Identities = 75/161 (46%), Positives = 102/161 (63%), Gaps = 13/161 (8%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L ++DKFSS AEK VL+GYSNF+KGYKL+SL+ K+ FSRDV
Sbjct: 399 KPSLLHLRNFGCLCFSTVLHDSDKFSSNAEKCVLLGYSNFKKGYKLWSLDSKKVFFSRDV 458
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDTPNDDITHSDHHE--SEGSP 358
+F+E+VFPF+IK + ++ LNH NFFD + + S+ PND+ + H+ +EG
Sbjct: 459 KFYESVFPFQIKNFDNQESVYNKQLNHANFFDNILSEVSNIPNDEEGANGSHDPANEGQQ 518
Query: 359 SL--HLGSPTIDHEQG---------VLEHSDGSNEVTSTSE 448
L +P EQ + +H GSN T+ SE
Sbjct: 519 PLPPSTSAPVQQSEQEGSSGLDADVMADHITGSNVETNQSE 559
>gb|OTF97228.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 583
Score = 137 bits (345), Expect = 1e-34
Identities = 76/172 (44%), Positives = 102/172 (59%), Gaps = 8/172 (4%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L + DK S AEK VL+GYSN +KGYKL+SL+ K+ +SRDV
Sbjct: 374 KPSLEHLRIFGCLCFSTVLNDLDKLSFNAEKCVLIGYSNVKKGYKLWSLDNKKEFYSRDV 433
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E VFPFK + L+QSLNH+NFFD EV PND+ D HE G
Sbjct: 434 KFYETVFPFKSSQIANQDKNLNQSLNHLNFFDSVEVLTTCPLNPNDEERSHDSHEVTGDD 493
Query: 359 SLHLGS----PTIDHEQGV--LEHSDGSNEVTSTSELAATPLGVSNSEGENS 496
+ S PT++H+ +E S S+E + + + + SEG +S
Sbjct: 494 QQPVPSTSAIPTVEHQHSTVGVESSSSSDEYGRAEDTSTSNDEIIQSEGTSS 545
>gb|OTF94209.1| putative ribonuclease H-like domain, Reverse transcriptase,
RNA-dependent DNA polymerase [Helianthus annuus]
Length = 787
Score = 137 bits (344), Expect = 3e-34
Identities = 77/170 (45%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP HLR FGCLCF+TIL N+DK S AEK VL+GYSN +KGYKL+SL+ K+ +SRDV
Sbjct: 48 KPSFAHLRVFGCLCFSTILNNSDKLSFNAEKCVLIGYSNTKKGYKLWSLDNKKEFYSRDV 107
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGS- 355
+F+ENVFPFK + L+++LNH+NFFD EV PND+ + HE G
Sbjct: 108 KFYENVFPFKSNKTVNQDVSLTENLNHLNFFDIVEVLTTKPIVPNDEEGSNQTHEVTGEN 167
Query: 356 ----PSLHLGSPTIDHEQGV--LEHSDGSNEVTSTSELAATPLGVSNSEG 487
PS + DH+ V +E S SNE E + + + SEG
Sbjct: 168 QQPIPSTSASPSSADHQHSVVGVESSSSSNESGRAEEASISHDEFNPSEG 217
>gb|OTG37431.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1459
Score = 132 bits (333), Expect = 1e-32
Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 19/166 (11%)
Frame = +2
Query: 8 PELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDVR 187
P L+HLR FGCLCF+T+LT++DKF+ A+K V +GYSNF+KGYKL SL+ K+ FSRDV+
Sbjct: 726 PSLSHLRNFGCLCFSTVLTDSDKFAYHADKCVFLGYSNFKKGYKLLSLDTKKIFFSRDVK 785
Query: 188 FFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDTPNDDITHS------DHHESE 349
F+ENV+PFK K+ ++LN +NFFDE A + D P+D+ + +
Sbjct: 786 FYENVYPFKTKSFDNQETICEKNLNQLNFFDEYASEIPDMPDDEEGTNGANNPISDDQQP 845
Query: 350 GSPSLHLGSPTIDHEQ-------------GVLEHSDGSNEVTSTSE 448
SPS P +DH Q G E + G NE T+ SE
Sbjct: 846 LSPSTSAPVPMVDHSQQGGQESSSRQDDSGRAEDTLGLNEDTNLSE 891
>ref|XP_021980567.1| uncharacterized protein LOC110876714 [Helianthus annuus]
Length = 942
Score = 131 bits (330), Expect = 2e-32
Identities = 72/167 (43%), Positives = 96/167 (57%), Gaps = 7/167 (4%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L H R FGCLCF+TIL N DK S AEK +L+GYSN +KGYKL+SL+ K+ +SRDV
Sbjct: 455 KPSLAHFRIFGCLCFSTILNNMDKLSLNAEKCILIGYSNVKKGYKLWSLDNKKEFYSRDV 514
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGS- 355
+F+E VFP+K + + L+ LNH+NFFD EV N PND+ +S+ HE G
Sbjct: 515 KFYETVFPYKSNKLTNHDDTLTGRLNHLNFFDSVEVLTTNPIVPNDEEGNSESHEVSGDD 574
Query: 356 ----PSLHLGSPTIDHEQGVLEHSDGSNEVTSTSELAATPLGVSNSE 484
PS ++H+ S+E + +E G SN E
Sbjct: 575 QQPFPSTSATPNNVEHQHSTTGVESSSSEGSGRAE----DTGTSNDE 617
>ref|XP_021986675.1| uncharacterized protein LOC110883152 [Helianthus annuus]
Length = 738
Score = 128 bits (321), Expect = 4e-31
Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+TIL + DK S AEK VL+GYSN +KGYKL+SL+ K+ +SRDV
Sbjct: 499 KPSLKHLRIFGCLCFSTILNDLDKLSFNAEKCVLIGYSNVKKGYKLWSLDNKREFYSRDV 558
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E VFP+K ++ L+ SLNH+NFFD EV +PND+ + HE G
Sbjct: 559 KFYETVFPYKSTQITSQDKNLTHSLNHLNFFDSVEVLTTYPISPNDEERSHESHEVTGDD 618
Query: 359 SLHLGSPTIDHEQGVLEHSDGSNEVTSTSELAATPLGVSNSEGENS 496
+ S + +HS E +S+SE S S E S
Sbjct: 619 QQPIPSTSAIPTAVEHQHSTVGVESSSSSEGYGRAEDTSTSNDEFS 664
>gb|OTG33444.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1427
Score = 127 bits (320), Expect = 6e-31
Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 11/170 (6%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP LNHLR FGCLCF+T+L N DKF S AEK V +GYSN +KGYKL+S+++KQ +FSRDV
Sbjct: 693 KPFLNHLRNFGCLCFSTVLNNPDKFGSHAEKCVFLGYSNQKKGYKLWSIDKKQIIFSRDV 752
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD----EVACDNSDTPNDD-----ITHSDH 337
RF+ENVFPFK + N + S+N++NFFD + ++ + PND+ H D
Sbjct: 753 RFYENVFPFKDNKNLCESNQ-NTSINNLNFFDFFDETIVYEDGNIPNDEGGVQNEVHDDS 811
Query: 338 HESEGSPSL--HLGSPTIDHEQGVLEHSDGSNEVTSTSELAATPLGVSNS 481
++ P + ++ + G ++TS ++ P G S +
Sbjct: 812 TINDQQPQVTTEPAGTAVEQQPSSERSIPGMADITSRNDDVIPPEGTSET 861
>gb|OTF92045.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1342
Score = 125 bits (315), Expect = 3e-30
Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP HLR FGCLCF+T+L + DKF+ +EK +L+GYSN +KGYKL+SL+ K+ +SRDV
Sbjct: 603 KPSYAHLRVFGCLCFSTVLNDLDKFAFNSEKCILIGYSNVKKGYKLWSLDNKREFYSRDV 662
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E VFP+K + + +S+S+N +NFFD E + NS PND+ ++D HE GS
Sbjct: 663 KFYETVFPYKSQQLTNQDKYVSESVNQLNFFDSVETSTINSINPNDEEGNNDSHEVAGSD 722
Query: 359 SLHLGSPTIDHEQGVLEHSDGSNEVTSTSE 448
S + S E +S+SE
Sbjct: 723 QQSFPSTSATPTDAEQPCSTSGVESSSSSE 752
>gb|OTG10849.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1071
Score = 125 bits (313), Expect = 5e-30
Identities = 59/133 (44%), Positives = 83/133 (62%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L+HLR FGCLCF+T+L + DKF+ A+K V +GYSN +KGYK++ L+ K+ FSRDV
Sbjct: 351 KPSLSHLRNFGCLCFSTVLNDPDKFAFHADKCVFLGYSNIKKGYKVWILDNKKIYFSRDV 410
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDTPNDDITHSDHHESEGSPSL 364
+F+EN++PFK+KT +LNH+NFFD + + + PND+ S H+
Sbjct: 411 KFYENIYPFKLKTIGNQGKVFELNLNHLNFFDIITSEVPNMPNDEEGISGAHDPVSDDQQ 470
Query: 365 HLGSPTIDHEQGV 403
L T GV
Sbjct: 471 PLSPSTSAPVSGV 483
>gb|OTG28797.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1130
Score = 123 bits (309), Expect = 2e-29
Identities = 71/168 (42%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L H R FGCLCF+TIL ++DK S AEK VL+GYSN +KGYKL+SL+ K+ FSRDV
Sbjct: 390 KPSLAHFRVFGCLCFSTILNDSDKLSFNAEKCVLIGYSNVKKGYKLWSLDNKREFFSRDV 449
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E+VFPFK + S + LNH+NFFD E+ +S P+D+ +E G
Sbjct: 450 KFYESVFPFKSERLSNLDSSFPTELNHLNFFDNAEILTVSSAVPDDEEGSHKPYEVSGGD 509
Query: 359 SLHLGSPTIDHEQGVLEHSD-GSNEVTSTSELAATPLGVSNSEGENSP 499
+ S + E ++H +S+SE G S S E +P
Sbjct: 510 QQPVPSTSAVPENVNVDHQHFDPGTGSSSSEGCGRAEGTSVSNEEVNP 557
>gb|OTG22467.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1133
Score = 123 bits (309), Expect = 2e-29
Identities = 71/168 (42%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L H R FGCLCF+TIL ++DK S AEK VL+GYSN +KGYKL+SL+ K+ FSRDV
Sbjct: 393 KPSLAHFRVFGCLCFSTILNDSDKLSFNAEKCVLIGYSNVKKGYKLWSLDNKREFFSRDV 452
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E+VFPFK + S + LNH+NFFD E+ +S P+D+ +E G
Sbjct: 453 KFYESVFPFKSERLSNLDSSFPTELNHLNFFDNAEILTVSSAVPDDEEGSHKPYEVSGGD 512
Query: 359 SLHLGSPTIDHEQGVLEHSD-GSNEVTSTSELAATPLGVSNSEGENSP 499
+ S + E ++H +S+SE G S S E +P
Sbjct: 513 QQPVPSTSAVPENVNVDHQHFDPGTGSSSSEGCGRAEGTSVSNEEVNP 560
>gb|OTG17851.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1344
Score = 123 bits (309), Expect = 2e-29
Identities = 71/168 (42%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L H R FGCLCF+TIL ++DK S AEK VL+GYSN +KGYKL+SL+ K+ FSRDV
Sbjct: 604 KPSLAHFRVFGCLCFSTILNDSDKLSFNAEKCVLIGYSNVKKGYKLWSLDNKREFFSRDV 663
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFD--EVACDNSDTPNDDITHSDHHESEGSP 358
+F+E+VFPFK + S + LNH+NFFD E+ +S P+D+ +E G
Sbjct: 664 KFYESVFPFKSERLSNLDSSFPTELNHLNFFDNAEILTVSSAVPDDEEGSHKPYEVSGGD 723
Query: 359 SLHLGSPTIDHEQGVLEHSD-GSNEVTSTSELAATPLGVSNSEGENSP 499
+ S + E ++H +S+SE G S S E +P
Sbjct: 724 QQPVPSTSAVPENVNVDHQHFDPGTGSSSSEGCGRAEGTSVSNEEVNP 771
>gb|OTG29010.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1115
Score = 122 bits (305), Expect = 6e-29
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L +DKF+ A+K VL+GYSN +KGYKL+SL+ K+ LFSRDV
Sbjct: 378 KPSLMHLRNFGCLCFSTVLNESDKFTYHADKCVLIGYSNVKKGYKLWSLDNKKVLFSRDV 437
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDT------PNDDITHSDHHES 346
+F+E+V+PFK K + + + ++LNH+ FFD C +++T P+D+ ++ H S
Sbjct: 438 KFYEDVYPFKNKHVGNS-DFIDKTLNHITFFD---CYDTETPEVSQMPDDEEGNNGSHGS 493
Query: 347 EGSPSLHLGSPT------IDHEQGVLEHSDGSNEV--TSTSELAATPLGVSN-SEG 487
LG T D Q V +GS+E +E + TP +N SEG
Sbjct: 494 SSDDQQPLGPSTSTITSIADQPQQVPTGYEGSSETGFYGEAEDSGTPSDETNLSEG 549
>gb|OTG38120.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1132
Score = 122 bits (305), Expect = 6e-29
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L +DKF+ A+K VL+GYSN +KGYKL+SL+ K+ LFSRDV
Sbjct: 395 KPSLMHLRNFGCLCFSTVLNESDKFTYHADKCVLIGYSNVKKGYKLWSLDNKKVLFSRDV 454
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDT------PNDDITHSDHHES 346
+F+E+V+PFK K + + + ++LNH+ FFD C +++T P+D+ ++ H S
Sbjct: 455 KFYEDVYPFKNKHVGNS-DFIDKTLNHITFFD---CYDTETPEVSQMPDDEEGNNGSHGS 510
Query: 347 EGSPSLHLGSPT------IDHEQGVLEHSDGSNEV--TSTSELAATPLGVSN-SEG 487
LG T D Q V +GS+E +E + TP +N SEG
Sbjct: 511 SSDDQQPLGPSTSTITSIADQPQQVPTGYEGSSETGFYGEAEDSGTPSDETNLSEG 566
>gb|OTG09743.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
Gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 1041
Score = 121 bits (304), Expect = 8e-29
Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 14/175 (8%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L DKF+ A+K VL+GYSN +KGYKL+SL+ K+ LFSRDV
Sbjct: 293 KPSLMHLRNFGCLCFSTVLNETDKFTYHADKCVLIGYSNVKKGYKLWSLDNKKVLFSRDV 352
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDN-----SDTPNDDITHSDHHESE 349
+F+E+V+PFK K + + ++LNH+ FFD DN S P+D+ ++ H S
Sbjct: 353 KFYEDVYPFKSKHVGNS-EFIDKNLNHITFFD--CYDNETPEVSQMPDDEEGNNGSHGSS 409
Query: 350 GSPSLHLGSPT------IDHEQGVLEHSDGSNEV--TSTSELAATPLGVSN-SEG 487
LG T D Q V +GS+E +E + TP +N SEG
Sbjct: 410 SDDQQPLGPSTSTITSVADQPQQVPTGYEGSSETGFYGEAEDSGTPSDETNLSEG 464
>gb|OTG22197.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
Length = 541
Score = 120 bits (301), Expect = 1e-28
Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 12/154 (7%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
KP L HLR FGCLCF+T+L +DKF+ A+K VL+GYSN +KGYKL+SL+ K+ LFSRDV
Sbjct: 378 KPSLMHLRNFGCLCFSTVLNESDKFTYHADKCVLIGYSNVKKGYKLWSLDNKKVLFSRDV 437
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDT------PNDDITHSDHHES 346
+F+E+V+PFK K + + + ++LNH+ FFD C +++T P+D+ ++ H S
Sbjct: 438 KFYEDVYPFKNKHVGNS-DFIDKTLNHITFFD---CYDTETPEVSQMPDDEEGNNGSHGS 493
Query: 347 EGSPSLHLGSPT------IDHEQGVLEHSDGSNE 430
LG T D Q V +GS+E
Sbjct: 494 SSDDQQPLGPSTSTITSIADQPQQVPTGYEGSSE 527
>gb|OTG21088.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1460
Score = 121 bits (303), Expect = 1e-28
Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 24/172 (13%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
+P L+HLR+FGCLCF+T+L +DKF+ A+K VL+GYSN +KGYKL+SL+ K+ FSRDV
Sbjct: 718 EPSLSHLRSFGCLCFSTVLNESDKFAYHADKCVLIGYSNVKKGYKLWSLDEKKVYFSRDV 777
Query: 185 RFFENVFPFKIKTSSAAPN--PLSQSLNHVNFFDEVACDNSD---TPNDDITHSDHHE-- 343
+F+E+VFPFK K + +SLNHVNFFD +++ TPND+ + H+
Sbjct: 778 KFYEHVFPFKSKLLDIDMGNIDVDKSLNHVNFFDRYEAFSTEIPQTPNDEEGANRSHDIV 837
Query: 344 SEG-----SPSLHLGSPTIDH------------EQGVLEHSDGSNEVTSTSE 448
SE S S G + H E GV E + SN+ + SE
Sbjct: 838 SEAQQPIPSTSATPGPVDLGHNIESSVDSSDREESGVAEDTAVSNDEINPSE 889
>gb|OTG13854.1| putative ribonuclease H-like domain, Reverse transcriptase,
RNA-dependent DNA polymerase [Helianthus annuus]
Length = 757
Score = 120 bits (302), Expect = 1e-28
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 9/135 (6%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
+P L+HL+ FGCLCF T+L N DK +AEK + +GYSN +KGYK++SL++K+F FSRDV
Sbjct: 83 EPSLSHLKIFGCLCFFTVLNNPDKLDEKAEKCIFMGYSNLKKGYKVWSLDQKKFTFSRDV 142
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSDTPNDD---------ITHSDH 337
F+ENVFP+K K S + ++SLN++NFFD + P+D+ +T
Sbjct: 143 SFYENVFPYKTKLFSKSDLDNTESLNNLNFFDFYDSSSDINPDDEEKVETDSAAVTQQHS 202
Query: 338 HESEGSPSLHLGSPT 382
SE P + P+
Sbjct: 203 SSSESDPHVDTQQPS 217
>gb|OTG09173.1| putative reverse transcriptase, RNA-dependent DNA polymerase
[Helianthus annuus]
Length = 962
Score = 120 bits (300), Expect = 3e-28
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Frame = +2
Query: 5 KPELNHLRTFGCLCFATILTNNDKFSSRAEKYVLVGYSNFQKGYKLYSLERKQFLFSRDV 184
+P L+H R FGCLCF+TIL DKF+ A+K VL+GYSN +KGYKL+S++ K+F FSRDV
Sbjct: 224 RPSLSHFRNFGCLCFSTILNEPDKFAYHADKCVLIGYSNVKKGYKLWSIDEKKFFFSRDV 283
Query: 185 RFFENVFPFKIKTSSAAPNPLSQSLNHVNFFDEVACDNSD---TPNDDITHSDHHESEG- 352
+F+E+V+PFK K + N + SLN +NFFD+ ++ + TP+D+ +D H++
Sbjct: 284 KFYEHVYPFKSKQINDDVN-VDNSLNLINFFDKNETNSPEFSLTPDDEEGTTDSHDTVSD 342
Query: 353 ------SPSLHLGSPTIDHEQGVLEHSDGSNEVTSTSELAATPLGVSNSEG 487
S S G + H G E + + ++ SEG
Sbjct: 343 DQQPGPSTSATPGLSSAGHNLGTSVEGSSRRESGRAEDTVVSTDEINPSEG 393